CUL5

General Information

Gene Name : CUL5
Gene ID : ENSG00000166266.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CUL5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CUL5	ENSG00000166266.13	18.23	12.68	15.46	ENCSR000AEF
HepG2	CUL5	ENSG00000166266.13	5.82	11.91	8.87	ENCSR985KAT
K562	CUL5	ENSG00000166266.13	14.82	15.11	14.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CUL5 is not avaliable on ENCORE database.

Proteins bound to RNA

CUL5 RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for CUL5 is not avaliable on ENCORE database.

23 proteins are bound to CUL5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	107955730	107955745	+	intron-Distal	6.53581	400.00000	K562	TROVE2
chr11	107955687	107955726	+	intron-Distal	6.88668	400.00000	K562	TROVE2
chr11	107955726	107955730	+	intron-Distal	6.85168	400.00000	K562	TROVE2
chr11	107955689	107955743	+	intron-Distal	3.66162	13.15124	K562	YBX3
chr11	107925602	107925680	+	3'-UTR,CDS	4.96632	11.99174	HepG2	BCLAF1
chr11	107943085	107943187	+	CDS	3.72039	11.19453	HepG2	BCLAF1
chr11	107955696	107955744	+	intron-Distal	3.15684	10.08373	K562	TIA1
chr11	107948904	107948965	+	CDS	5.37282	8.86847	HepG2	BCLAF1
chr11	107880073	107880187	+	5'-UTR,CDS,intron-Proximal	5.28153	8.04585	HepG2	PRPF8
chr11	107966354	107966431	+	CDS,intron-Proximal	4.30181	7.97334	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 62 entries

eCLIP assay for CUL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CUL5 is not available on ENCORE database.
67 RBPs can affect the levels of CUL5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CUL5 is not available on ENCORE database.

67 RBPs can affect the gene expression of CUL5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CUL5	ENSG00000166266.9	2119.93950	1013.57900	1.06450	39.66210	38.32790	HepG2	SRSF1
CUL5	ENSG00000166266.9	1064.93790	1845.11980	-0.79290	11.56850	8.99660	K562	IGF2BP3
CUL5	ENSG00000166266.9	1469.28730	916.76050	0.68040	10.16640	8.93440	HepG2	RBM25
CUL5	ENSG00000166266.9	504.99640	780.51180	-0.62810	9.14730	8.21380	HepG2	TRIM56
CUL5	ENSG00000166266.9	487.25300	773.64710	-0.66700	8.05710	7.28460	HepG2	TIAL1
CUL5	ENSG00000166266.9	1112.34480	1573.95840	-0.50080	8.24110	6.91480	K562	MTPAP
CUL5	ENSG00000166266.9	744.47800	1282.75180	-0.78490	8.54460	6.75320	K562	HNRNPM
CUL5	ENSG00000166266.9	1392.54460	2114.39490	-0.60250	7.67020	6.36360	K562	HSPD1
CUL5	ENSG00000166266.9	1156.03250	1729.11690	-0.58090	7.03310	5.96330	K562	EIF2S2
CUL5	ENSG00000166266.9	506.62950	707.34790	-0.48150	6.01740	5.10980	HepG2	DNAJC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 76 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CUL5 is not available on ENCORE database.

14 RBPs can affect the splicing of CUL5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	0.27800	0.00000	0.00001	included	K562	SRSF1
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	-0.35400	0.00000	0.00046	excluded	K562	SRSF7
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	-0.41800	0.00000	0.00000	excluded	K562	U2AF2
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	-0.35300	0.00000	0.00003	excluded	K562	HNRNPK
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969187	107969256	107976933	107977579	-0.25000	0.00006	0.02237	excluded	K562	WDR3
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	-0.45200	0.00006	0.00275	excluded	HepG2	HNRNPK
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969187	107969256	107976933	107977579	0.36100	0.00013	0.01565	included	HepG2	TBRG4
SE	CUL5	ENSG00000166266.9	chr11	+	107974916	107975629			107969132	107969256	107976933	107977579	0.28100	0.00021	0.01132	included	K562	FXR1
MXE	CUL5	ENSG00000166266.9	chr11	+	107916996	107917096	107920616	107920793	107904527	107904637	107923386	107923528	0.37200	0.00042	0.04454	1included	HepG2	HNRNPM
SE	CUL5	ENSG00000166266.9	chr11	+	107960218	107960350			107959253	107959386	107965117	107965241	-0.10700	0.00046	0.01098	excluded	K562	SF3B4

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CUL5

General Information

Functions

Localization

Domains (AlphaFold: CUL5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CUL5 is not avaliable on ENCORE database.

23 proteins are bound to CUL5 RNA:

eCLIP assay for CUL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CUL5 is not available on ENCORE database.

67 RBPs can affect the gene expression of CUL5 :

The Knockdown/knockout RNA-Seq assay for CUL5 is not available on ENCORE database.

14 RBPs can affect the splicing of CUL5 :

The Knockdown/knockout RNA-Seq assay for CUL5 is not avaliable on ENCORE database.