CDK19

General Information

Gene Name : CDK19
Gene ID : ENSG00000155111.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CDK19)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CDK19	ENSG00000155111.14	11.05	10.81	10.93	ENCSR000AEF
HepG2	CDK19	ENSG00000155111.14	8.76	15.39	12.07	ENCSR985KAT
K562	CDK19	ENSG00000155111.14	6.38	6.03	6.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CDK19 is not avaliable on ENCORE database.

Proteins bound to RNA

CDK19 RNA is bound by 38 proteins.

CanvasJS.com

eCLIP assay for CDK19 is not avaliable on ENCORE database.

38 proteins are bound to CDK19 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	111016267	111016365	-	intron-Distal	5.82315	35.54351	HepG2	PTBP1
chr6	111136502	111136595	-	5'-UTR,intron-Distal,intron-Proximal	5.07138	17.93995	K562	CSTF2T
chr6	111052253	111052307	-	intron-Distal	5.23506	17.71142	HepG2	PTBP1
chr6	111135802	111135908	-	intron-Distal	4.09052	15.65281	K562	CSTF2T
chr6	111077814	111077941	-	intron-Distal	4.06253	13.88979	HepG2	HNRNPL
chr6	110956257	110956338	-	intron-Distal	5.77138	13.63922	HepG2	QKI
chr6	111136090	111136217	-	5'-UTR,CDS,intron-Distal	4.12280	13.57436	K562	CSTF2T
chr6	111033895	111033982	-	intron-Distal	3.39081	12.80763	HepG2	QKI
chr6	111016268	111016378	-	intron-Distal	6.26515	12.30102	HepG2	PCBP2
chr6	111125155	111125189	-	intron-Distal	5.12643	12.24240	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 106 entries

eCLIP assay for CDK19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CDK19 is not available on ENCORE database.
146 RBPs can affect the levels of CDK19.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CDK19 is not available on ENCORE database.

146 RBPs can affect the gene expression of CDK19 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CDK19	ENSG00000155111.10	565.52670	1775.50570	-1.65060	82.87140	80.43280	HepG2	SUCLG1
CDK19	ENSG00000155111.10	487.91390	1385.17310	-1.50540	57.41480	54.96450	HepG2	HNRNPU
CDK19	ENSG00000155111.10	492.74240	2111.71420	-2.09950	49.79520	47.96970	HepG2	AKAP1
CDK19	ENSG00000155111.10	594.74360	1553.55080	-1.38520	47.10470	45.11300	HepG2	CELF1
CDK19	ENSG00000155111.10	726.59190	1643.22590	-1.17730	34.87130	33.16980	HepG2	TAF15
CDK19	ENSG00000155111.10	613.59970	1707.85450	-1.47680	29.58800	27.31280	HepG2	PABPC4
CDK19	ENSG00000155111.10	850.85000	1653.21920	-0.95830	28.22450	26.63100	HepG2	PCBP1
CDK19	ENSG00000155111.10	661.85600	1873.72460	-1.50130	28.10640	26.27880	HepG2	MATR3
CDK19	ENSG00000155111.10	803.98090	1561.19440	-0.95740	26.89330	25.22360	HepG2	SRSF5
CDK19	ENSG00000155111.10	814.98390	2022.81170	-1.31150	25.14940	23.45700	HepG2	DDX3X
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 166 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CDK19 is not available on ENCORE database.

3 RBPs can affect the splicing of CDK19 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	CDK19	ENSG00000155111.10	chr6	-	110944492	110944565	110947978	110948048	110944017	110944115	110948204	110948348	0.12700	0.00003	0.00295	1included	HepG2	RBFOX2
SE	CDK19	ENSG00000155111.10	chr6	-	111095078	111095140			111067328	111067404	111136211	111136299	0.25100	0.00005	0.01136	included	HepG2	LARP4
MXE	CDK19	ENSG00000155111.10	chr6	-	110944492	110944565	110947978	110948048	110944017	110944115	110948204	110948348	0.14400	0.00005	0.00142	1included	HepG2	SFPQ

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CDK19

General Information

Functions

Localization

Domains (AlphaFold: CDK19)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CDK19 is not avaliable on ENCORE database.

38 proteins are bound to CDK19 RNA:

eCLIP assay for CDK19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CDK19 is not available on ENCORE database.

146 RBPs can affect the gene expression of CDK19 :

The Knockdown/knockout RNA-Seq assay for CDK19 is not available on ENCORE database.

3 RBPs can affect the splicing of CDK19 :

The Knockdown/knockout RNA-Seq assay for CDK19 is not avaliable on ENCORE database.