CA5A

General Information

Gene Name : CA5A
Gene ID : ENSG00000174990.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CA5A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CA5A	ENSG00000174990.5	0.00	0.00	0.00	ENCSR000AEF
HepG2	CA5A	ENSG00000174990.5	67.06	49.12	58.09	ENCSR985KAT
K562	CA5A	ENSG00000174990.5	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CA5A is not avaliable on ENCORE database.

Proteins bound to RNA

CA5A RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for CA5A is not avaliable on ENCORE database.

23 proteins are bound to CA5A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	87960272	87960328	-	intron-Distal,intron-Proximal	3.84693	32.64262	HepG2	RBM22
chr16	87947217	87947319	-	intron-Distal	4.67429	29.63714	HepG2	SLTM
chr16	87925545	87925621	-	CDS,intron-Distal,intron-Proximal	4.65465	24.23298	HepG2	SF3A3
chr16	87958722	87958820	-	intron-Distal	4.17384	23.44150	HepG2	SLTM
chr16	87935996	87936084	-	CDS,intron-Distal,intron-Proximal	3.90551	23.23276	HepG2	PRPF8
chr16	87960136	87960275	-	intron-Distal,intron-Proximal	3.13946	21.53626	HepG2	EFTUD2
chr16	87959362	87959420	-	intron-Distal	3.92665	18.09059	HepG2	SLTM
chr16	87934297	87934400	-	intron-Distal	4.23383	16.03312	HepG2	HNRNPK
chr16	87957591	87957671	-	intron-Distal	3.09570	15.12374	HepG2	HLTF
chr16	87958461	87958547	-	intron-Distal	3.92349	13.91403	HepG2	SLTM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 60 entries

eCLIP assay for CA5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CA5A is not available on ENCORE database.
84 RBPs can affect the levels of CA5A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CA5A is not available on ENCORE database.

84 RBPs can affect the gene expression of CA5A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CA5A	ENSG00000174990.3	85.14240	592.97930	-2.80000	44.38760	42.63900	HepG2	AKAP1
CA5A	ENSG00000174990.3	1166.91060	492.07760	1.24560	37.59040	36.20760	HepG2	SSB
CA5A	ENSG00000174990.3	147.49880	501.78380	-1.76640	28.88140	27.55940	HepG2	RBM22
CA5A	ENSG00000174990.3	201.84130	566.74920	-1.48950	26.93140	25.78620	HepG2	SRFBP1
CA5A	ENSG00000174990.3	114.05700	388.48370	-1.76810	17.46530	15.82110	HepG2	FIP1L1
CA5A	ENSG00000174990.3	389.27670	135.98640	1.51720	14.13270	12.79320	HepG2	GPKOW
CA5A	ENSG00000174990.3	975.57200	466.13520	1.06540	14.35790	12.75400	HepG2	CIRBP
CA5A	ENSG00000174990.3	116.44310	379.51870	-1.70450	12.67920	11.57850	HepG2	ACO1
CA5A	ENSG00000174990.3	85.60120	311.55640	-1.86380	12.30630	10.90400	HepG2	RAVER1
CA5A	ENSG00000174990.3	314.99670	115.08970	1.45250	12.30010	10.83170	HepG2	NSUN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 84 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CA5A is not available on ENCORE database.

13 RBPs can affect the splicing of CA5A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	0.28700	0.00000	0.00000	included	HepG2	HNRNPL
SE	CA5A	ENSG00000174990.3	chr16	-	87927224	87927332			87925404	87925560	87935517	87935580	0.44300	0.00000	0.00004	included	HepG2	HNRNPC
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	0.22200	0.00001	0.00258	included	HepG2	TBRG4
SE	CA5A	ENSG00000174990.3	chr16	-	87927224	87927332			87925404	87925560	87935517	87935580	-0.16800	0.00001	0.00197	excluded	HepG2	TBRG4
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	0.27500	0.00002	0.00202	included	HepG2	MATR3
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	0.20700	0.00004	0.04111	included	HepG2	PPIG
SE	CA5A	ENSG00000174990.3	chr16	-	87936030	87936126			87925404	87925560	87960353	87960551	-0.42700	0.00005	0.00417	excluded	HepG2	HNRNPU
MXE	CA5A	ENSG00000174990.3	chr16	-	87936030	87936126	87938391	87938510	87935517	87935580	87960353	87960551	0.15100	0.00008	0.06921	1included	HepG2	PPIG
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	0.18400	0.00018	0.09444	included	HepG2	NKRF
SE	CA5A	ENSG00000174990.3	chr16	-	87938391	87938510			87936030	87936126	87960353	87960551	-0.18800	0.00025	0.02704	excluded	HepG2	QKI

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CA5A

General Information

Functions

Localization

Domains (AlphaFold: CA5A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CA5A is not avaliable on ENCORE database.

23 proteins are bound to CA5A RNA:

eCLIP assay for CA5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CA5A is not available on ENCORE database.

84 RBPs can affect the gene expression of CA5A :

The Knockdown/knockout RNA-Seq assay for CA5A is not available on ENCORE database.

13 RBPs can affect the splicing of CA5A :

The Knockdown/knockout RNA-Seq assay for CA5A is not avaliable on ENCORE database.