ABCC10

General Information

Gene Name : ABCC10
Gene ID : ENSG00000124574.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ABCC10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ABCC10	ENSG00000124574.14	6.01	3.67	4.84	ENCSR000AEF
HepG2	ABCC10	ENSG00000124574.14	17.16	11.34	14.25	ENCSR985KAT
K562	ABCC10	ENSG00000124574.14	18.63	14.36	16.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ABCC10 is not avaliable on ENCORE database.

Proteins bound to RNA

ABCC10 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for ABCC10 is not avaliable on ENCORE database.

19 proteins are bound to ABCC10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	43400451	43400576	+	CDS,intron-Distal	3.81550	15.59344	HepG2	XPO5
chr6	43401070	43401142	+	CDS,intron-Proximal	3.89122	14.90184	HepG2	PRPF8
chr6	43406282	43406418	+	CDS,intron-Proximal	5.36208	13.82964	HepG2	EFTUD2
chr6	43414475	43414541	+	intron-Distal	5.83823	13.00605	HepG2	HNRNPK
chr6	43405670	43405761	+	CDS,intron-Proximal	3.81726	11.35339	HepG2	PPIG
chr6	43395535	43395713	+	5'-UTR,intron-Distal,intron-Proximal	6.28083	8.93136	HepG2	EFTUD2
chr6	43415358	43415408	+	intron-Proximal	4.57164	8.88051	HepG2	PCBP2
chr6	43403915	43403986	+	CDS,intron-Proximal	3.59193	8.74774	HepG2	PPIG
chr6	43405713	43405787	+	CDS,intron-Proximal	3.53604	8.66984	HepG2	PRPF8
chr6	43410893	43410917	+	CDS,intron-Proximal	3.78899	8.39123	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 35 entries

eCLIP assay for ABCC10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ABCC10 is not available on ENCORE database.
87 RBPs can affect the levels of ABCC10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ABCC10 is not available on ENCORE database.

87 RBPs can affect the gene expression of ABCC10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ABCC10	ENSG00000124574.10	1500.44770	668.24530	1.16680	38.81620	36.84710	HepG2	SRSF5
ABCC10	ENSG00000124574.10	1463.44650	718.44790	1.02630	37.73790	36.06080	HepG2	PUM1
ABCC10	ENSG00000124574.10	2312.03460	910.90560	1.34370	26.66660	24.93660	HepG2	DDX3X
ABCC10	ENSG00000124574.10	1203.18350	511.29090	1.23450	23.08090	21.62010	HepG2	BOP1
ABCC10	ENSG00000124574.10	836.01590	362.91220	1.20380	19.97500	18.55570	HepG2	RPS19
ABCC10	ENSG00000124574.10	1929.08820	863.79940	1.15910	18.93240	17.36940	HepG2	NCBP2
ABCC10	ENSG00000124574.10	1579.61590	919.20890	0.78100	16.88690	15.82010	HepG2	ZNF622
ABCC10	ENSG00000124574.10	1239.97930	759.94570	0.70620	15.96550	14.66960	HepG2	SUCLG1
ABCC10	ENSG00000124574.10	1673.72590	790.81620	1.08150	15.68050	14.23000	HepG2	IGF2BP2
ABCC10	ENSG00000124574.10	1478.56800	756.85040	0.96600	15.38330	13.86310	HepG2	RBM25
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ABCC10 is not available on ENCORE database.

21 RBPs can affect the splicing of ABCC10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	ABCC10	ENSG00000124574.10	chr6	+	43410707	43411748	43410707	43410897	43411670	43411748	0.46200	0.00000	0.00000	included	HepG2	HNRNPK
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	0.32800	0.00000	0.00001	included	HepG2	HNRNPK
SE	ABCC10	ENSG00000124574.10	chr6	+	43406008	43406128	43405671	43405751	43406361	43406533	-0.39000	0.00001	0.00129	excluded	HepG2	TIAL1
SE	ABCC10	ENSG00000124574.10	chr6	+	43406008	43406128	43405671	43405751	43406361	43406533	-0.12300	0.00002	0.00547	excluded	HepG2	LARP4
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	-0.50400	0.00003	0.01059	excluded	K562	IGF2BP2
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	-0.46600	0.00003	0.00128	excluded	HepG2	TIAL1
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	-0.49600	0.00004	0.00385	excluded	HepG2	HNRNPC
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	-0.50600	0.00005	0.00214	excluded	K562	SRSF1
RI	ABCC10	ENSG00000124574.10	chr6	+	43405671	43406533	43405671	43405751	43406361	43406533	-0.54000	0.00005	0.00685	excluded	K562	KHSRP
SE	ABCC10	ENSG00000124574.10	chr6	+	43406008	43406128	43405671	43405751	43406361	43406533	-0.13000	0.00008	0.02247	excluded	K562	EIF4G2

Showing 1 to 10 of 32 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ABCC10

General Information

Functions

Localization

Domains (AlphaFold: ABCC10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ABCC10 is not avaliable on ENCORE database.

19 proteins are bound to ABCC10 RNA:

eCLIP assay for ABCC10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ABCC10 is not available on ENCORE database.

87 RBPs can affect the gene expression of ABCC10 :

The Knockdown/knockout RNA-Seq assay for ABCC10 is not available on ENCORE database.

21 RBPs can affect the splicing of ABCC10 :

The Knockdown/knockout RNA-Seq assay for ABCC10 is not avaliable on ENCORE database.