ZNF500

General Information

Gene Name       : ZNF500
Gene ID             : ENSG00000103199.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF500)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF500ENSG00000103199.130.842.211.52ENCSR000AEF
HepG2ZNF500ENSG00000103199.134.683.153.92ENCSR985KAT
K562ZNF500ENSG00000103199.136.173.564.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF500 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF500 RNA is bound by 8 proteins.  







eCLIP assay for ZNF500 is not avaliable on ENCORE database.





8 proteins are bound to ZNF500 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1648029634803064-3'-UTR,CDS,intron-Distal,intron-Proximal3.090775.31654HepG2PPIG
chr1647999954800062-3'-UTR,intron-Distal4.063837.66463HepG2XPO5
chr1648017944801849-3'-UTR,intron-Distal3.956783.07786HepG2UPF1
chr1648017124801809-3'-UTR,intron-Distal5.567929.60749K562UPF1
chr1647990944799196-3'-UTR,intron-Distal3.962683.63122HepG2PRPF4
chr1648169774817057-5'-UTR,intron-Distal,intron-Proximal5.072514.35676HepG2PRPF8
chr1648122174812299-5'-UTR,CDS,intron-Distal,intron-Proximal4.034577.26133HepG2PRPF8
chr1648104954810590-5'-UTR,CDS,intron-Distal,intron-Proximal3.105633.63043HepG2GRWD1
chr1648122534812282-5'-UTR,CDS,intron-Distal,intron-Proximal3.483554.20336HepG2AQR
chr1648127324812805-CDS,intron-Distal,intron-Proximal5.7546013.83488HepG2SF3B4
chr1648155644815605-CDS,intron-Distal,intron-Proximal4.073673.20743HepG2PPIG
chr1648155094815567-CDS,intron-Distal,intron-Proximal5.346026.75320K562AQR
chr1648122324812253-intron-Distal,intron-Proximal4.854474.62947HepG2AQR
chr1648167894816848-intron-Distal4.911833.70058HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF500 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF500 is not available on ENCORE database.

  • 24 RBPs can affect the levels of ZNF500.  








The Knockdown/knockout RNA-Seq assay for ZNF500 is not available on ENCORE database.





24 RBPs can affect the gene expression of ZNF500 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF500ENSG00000103199.9220.85580156.633400.495601.900801.39660HepG2BOP1
ZNF500ENSG00000103199.9190.33280105.873900.846105.305304.44640HepG2DNAJC2
ZNF500ENSG00000103199.9216.88770119.946000.854504.133203.29850HepG2HNRNPC
ZNF500ENSG00000103199.9272.65150212.131200.362001.870601.30220HepG2HNRNPL
ZNF500ENSG00000103199.9336.22380239.035600.492102.201601.63460HepG2NCBP2
ZNF500ENSG00000103199.9278.95990203.504500.454902.000601.47150HepG2PCBP1
ZNF500ENSG00000103199.9281.57830207.054500.443402.224601.72370HepG2PTBP1
ZNF500ENSG00000103199.9319.00980234.033200.446803.002302.39040HepG2PUM1
ZNF500ENSG00000103199.9169.85590111.245600.610502.263901.70190HepG2RPS19
ZNF500ENSG00000103199.9179.63890106.451500.754802.856002.04360HepG2RPS3A
ZNF500ENSG00000103199.9173.59130106.109200.710003.434302.73030HepG2SAFB2
ZNF500ENSG00000103199.9316.18810215.604400.552303.106702.48470HepG2SF3B4
ZNF500ENSG00000103199.9166.32610225.03040-0.436101.738201.33890HepG2SRSF1
ZNF500ENSG00000103199.9292.52930217.680000.426302.412601.82340HepG2SRSF5
ZNF500ENSG00000103199.9149.12110202.22780-0.439501.863001.38630HepG2TAF15
ZNF500ENSG00000103199.9194.20050115.768800.746203.709803.14850HepG2TIAL1
ZNF500ENSG00000103199.9174.89420261.06740-0.577902.219301.65040HepG2U2AF1
ZNF500ENSG00000103199.9220.13860284.57850-0.370401.937401.45770HepG2ZNF622
ZNF500ENSG00000103199.9210.19040315.76400-0.587202.969602.36490K562AQR
ZNF500ENSG00000103199.9473.02930299.049600.661406.697405.74810K562DDX47
ZNF500ENSG00000103199.9300.26630173.486300.791304.745103.98370K562HNRNPC
ZNF500ENSG00000103199.987.96000167.40810-0.928402.688601.71540K562PABPN1
ZNF500ENSG00000103199.996.97530158.68670-0.710502.475301.76520K562PRPF8
ZNF500ENSG00000103199.9181.55280268.12680-0.562502.201801.70600K562PUS1
ZNF500ENSG00000103199.9193.70190121.193000.676402.494901.50500K562SRSF5
ZNF500ENSG00000103199.9205.44470125.263700.713703.477702.54480K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF500 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF500 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF500 is not avaliable on ENCORE database.