SNAI2

General Information

Gene Name       : SNAI2
Gene ID             : ENSG00000019549.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNAI2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNAI2ENSG00000019549.110.000.000.00ENCSR000AEF
HepG2SNAI2ENSG00000019549.110.030.050.04ENCSR985KAT
K562SNAI2ENSG00000019549.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNAI2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SNAI2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SNAI2 is not avaliable on ENCORE database.






NO known proteins are bound to SNAI2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SNAI2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNAI2 is not available on ENCORE database.

  • 38 RBPs can affect the levels of SNAI2.  








The Knockdown/knockout RNA-Seq assay for SNAI2 is not available on ENCORE database.





38 RBPs can affect the gene expression of SNAI2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNAI2ENSG00000019549.439.594204.591903.108004.466003.28980HepG2ABCF1
SNAI2ENSG00000019549.430.008500.867405.112505.765104.51980HepG2BCLAF1
SNAI2ENSG00000019549.424.177705.641702.099402.637002.05120HepG2BOP1
SNAI2ENSG00000019549.412.294300.0000099999.999903.985303.08310HepG2CALR
SNAI2ENSG00000019549.425.648304.223702.602203.341702.49730HepG2CIRBP
SNAI2ENSG00000019549.414.654502.721002.429002.107901.51560HepG2CKAP4
SNAI2ENSG00000019549.438.336102.348904.028604.988004.10490HepG2DDX21
SNAI2ENSG00000019549.420.914100.918604.508703.192401.81500HepG2DDX27
SNAI2ENSG00000019549.482.775702.895704.8371019.7221017.40060HepG2DDX5
SNAI2ENSG00000019549.451.455202.605004.3039011.070009.90180HepG2DKC1
SNAI2ENSG00000019549.48.054000.455104.145402.068501.48910HepG2DNAJC2
SNAI2ENSG00000019549.477.580604.693104.0470014.6071013.16050HepG2EIF4A3
SNAI2ENSG00000019549.49.497700.588704.011702.019501.31660HepG2EIF4G2
SNAI2ENSG00000019549.427.343403.981302.779803.718102.46210HepG2ESF1
SNAI2ENSG00000019549.49.418800.0000099999.999902.629301.75830HepG2GEMIN5
SNAI2ENSG00000019549.469.605200.464607.2270018.4679017.03790HepG2HNRNPA1
SNAI2ENSG00000019549.423.787300.516405.525405.467104.51920HepG2HNRNPC
SNAI2ENSG00000019549.4106.264605.606104.2444020.4661019.00060HepG2HNRNPLL
SNAI2ENSG00000019549.421.745003.952602.459703.148302.37980HepG2IGF2BP1
SNAI2ENSG00000019549.462.921304.466603.8162011.3995010.12770HepG2IGF2BP2
SNAI2ENSG00000019549.4109.329404.744304.5262021.4591019.72210HepG2MAGOH
SNAI2ENSG00000019549.418.783304.342302.112802.104601.46640HepG2PABPC4
SNAI2ENSG00000019549.418.173403.195002.507802.363101.85090HepG2PTBP1
SNAI2ENSG00000019549.434.157900.590505.854109.376808.36920HepG2PUF60
SNAI2ENSG00000019549.4107.610302.773605.2778027.6405026.06840HepG2PUS1
SNAI2ENSG00000019549.449.980305.846203.095705.200002.82320HepG2RBM39
SNAI2ENSG00000019549.437.132404.324403.102005.985005.03680HepG2RPLP0
SNAI2ENSG00000019549.414.422901.823502.983502.545301.63650HepG2RPS10
SNAI2ENSG00000019549.417.083800.457105.223904.741703.93700HepG2SAFB2
SNAI2ENSG00000019549.4177.562105.550404.9995011.056209.73330HepG2SF3B1
SNAI2ENSG00000019549.437.848103.330603.506306.398405.56030HepG2SF3B4
SNAI2ENSG00000019549.49.273100.564604.037602.104501.47820HepG2SLBP
SNAI2ENSG00000019549.419.000503.943702.268302.558901.88750HepG2SRSF7
SNAI2ENSG00000019549.4127.946102.807705.5099035.1348033.78680HepG2SSB
SNAI2ENSG00000019549.431.758003.136003.340006.127504.76250HepG2SUPT6H
SNAI2ENSG00000019549.444.881705.457803.039604.590203.68810HepG2TARDBP
SNAI2ENSG00000019549.411.590600.499804.535302.836702.33150HepG2TIAL1
SNAI2ENSG00000019549.423.636803.970202.573602.853602.21620HepG2U2AF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNAI2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SNAI2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SNAI2 is not avaliable on ENCORE database.