RUNX3

General Information

Gene Name       : RUNX3
Gene ID             : ENSG00000020633.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RUNX3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RUNX3ENSG00000020633.1830.8241.9936.41ENCSR000AEF
HepG2RUNX3ENSG00000020633.180.520.210.36ENCSR985KAT
K562RUNX3ENSG00000020633.180.280.130.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RUNX3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on RUNX3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RUNX3 is not avaliable on ENCORE database.






NO known proteins are bound to RUNX3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for RUNX3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RUNX3 is not available on ENCORE database.

  • 21 RBPs can affect the levels of RUNX3.  








The Knockdown/knockout RNA-Seq assay for RUNX3 is not available on ENCORE database.





21 RBPs can affect the gene expression of RUNX3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RUNX3ENSG00000020633.143.8632021.11760-2.450602.391301.51510HepG2ABCF1
RUNX3ENSG00000020633.1475.4011030.999001.282303.446402.57000HepG2ASCC1
RUNX3ENSG00000020633.1492.5717028.088201.720502.596601.33930HepG2DDX47
RUNX3ENSG00000020633.1464.5187030.827501.065402.199601.64280HepG2DDX6
RUNX3ENSG00000020633.1429.7936010.303001.531802.289701.64450HepG2DNAJC21
RUNX3ENSG00000020633.1445.0693013.345701.755703.525002.26480HepG2AGO1
RUNX3ENSG00000020633.148.1488032.75310-2.007003.296202.60010HepG2EIF4A3
RUNX3ENSG00000020633.1461.4793021.869301.491103.567302.65170HepG2EIF4G2
RUNX3ENSG00000020633.14126.2697015.407703.0347015.4133013.26380HepG2PABPC1
RUNX3ENSG00000020633.1443.0595018.307601.233802.150701.38210HepG2RBM15
RUNX3ENSG00000020633.146.1333041.97450-2.774805.626504.89800HepG2NELFE
RUNX3ENSG00000020633.1411.9557039.10010-1.709502.991102.35320HepG2RECQL
RUNX3ENSG00000020633.142.3304024.22130-3.377603.752302.96220HepG2SF3A3
RUNX3ENSG00000020633.143.9027040.98520-3.392606.751106.09140HepG2SRSF1
RUNX3ENSG00000020633.148.9735024.60040-1.454901.935201.39770HepG2SUCLG1
RUNX3ENSG00000020633.1465.2655011.268002.534009.287108.34650HepG2TRIM56
RUNX3ENSG00000020633.1450.6229021.481001.236602.788802.08670HepG2UPF1
RUNX3ENSG00000020633.146.2190020.73840-1.737501.837701.32740HepG2UTP3
RUNX3ENSG00000020633.1412.759100.473004.753502.529901.57180K562EIF3A
RUNX3ENSG00000020633.1418.946303.582102.402902.204801.34570K562PUM2
RUNX3ENSG00000020633.1421.624702.487403.119903.292002.39890K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RUNX3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RUNX3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RUNX3 is not avaliable on ENCORE database.