RP4-723E3.1

General Information

Gene Name : RP4-723E3.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP4-723E3.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP4-723E3.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP4-723E3.1 RNA is bound by 16 proteins.

eCLIP assay for RP4-723E3.1 is not avaliable on ENCORE database.

16 proteins are bound to RP4-723E3.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	51001583	51001689	+	intron-Distal	4.29689	4.89313	K562	HNRNPL
chr20	50852497	50852648	+	intron-Distal	3.63237	6.67899	K562	RBFOX2
chr20	51227464	51227536	+	intron-Distal	5.08234	5.39854	K562	PTBP1
chr20	51040123	51040150	+	intron-Distal	4.82573	11.63577	K562	AGGF1
chr20	51048876	51049019	+	intron-Distal	4.38703	5.30489	K562	TARDBP
chr20	50960339	50960379	+	intron-Distal	4.88390	7.24657	K562	HNRNPL
chr20	50959908	50959968	+	intron-Distal	3.18345	5.59415	K562	AGGF1
chr20	51040296	51040374	+	intron-Distal	5.64990	23.71583	K562	AGGF1
chr20	51166888	51166993	+	intron-Distal	4.65534	11.49456	K562	RBFOX2
chr20	50960379	50960427	+	intron-Distal	4.38655	5.73195	K562	HNRNPL
chr20	51186181	51186276	+	intron-Distal	3.69155	8.08605	K562	PTBP1
chr20	51041114	51041146	+	intron-Distal	4.87961	4.89827	K562	AGGF1
chr20	50910054	50910156	+	intron-Distal	3.46709	3.62826	K562	HNRNPL
chr20	51166915	51166980	+	intron-Distal	4.05164	5.16181	K562	PTBP1
chr20	50888028	50888100	+	intron-Distal	4.26015	4.38266	K562	TARDBP
chr20	51227897	51227951	+	intron-Distal	4.28986	10.68324	K562	PTBP1
chr20	50994314	50994367	+	intron-Distal	3.21519	3.07294	K562	DROSHA
chr20	51176592	51176657	+	intron-Distal	3.96153	3.30687	K562	EXOSC5
chr20	50924157	50924211	+	intron-Distal	4.39308	3.92866	K562	PTBP1
chr20	50994205	50994263	+	intron-Distal	3.26174	4.61386	K562	DROSHA
chr20	51178321	51178389	+	intron-Distal	3.74974	3.25538	K562	KHSRP
chr20	50994312	50994457	+	intron-Distal	5.00763	4.42197	K562	EWSR1
chr20	51185819	51185914	+	intron-Distal	4.40632	7.80454	K562	PTBP1
chr20	50931533	50931580	+	intron-Distal	5.91964	22.70665	K562	PTBP1
chr20	50985494	50985634	+	intron-Distal	3.67229	3.06411	K562	KHDRBS1
chr20	50954011	50954102	+	intron-Distal	6.08113	9.99398	K562	QKI
chr20	50903128	50903241	+	intron-Distal	4.60956	8.71046	K562	PTBP1
chr20	50861145	50861224	+	intron-Distal	3.68907	8.34230	K562	AGGF1
chr20	51176751	51176819	+	intron-Distal	4.68697	6.08953	K562	EXOSC5
chr20	50960297	50960339	+	intron-Distal	3.82723	4.70733	K562	HNRNPL
chr20	50919703	50919777	+	intron-Distal	4.32497	5.18738	K562	TARDBP
chr20	50994196	50994286	+	intron-Distal	3.78563	4.69941	K562	AKAP8L
chr20	50960271	50960351	+	intron-Distal	3.95935	9.11227	K562	AGGF1
chr20	50994177	50994400	+	intron-Distal	5.02446	12.55925	K562	GTF2F1
chr20	50931514	50931533	+	intron-Distal	5.65277	7.41017	K562	PTBP1
chr20	51247466	51247541	+	intron-Distal	5.62933	8.42544	K562	PTBP1
chr20	50994370	50994496	+	intron-Distal	3.54650	10.09707	K562	CSTF2T
chr20	50994190	50994312	+	intron-Distal	4.87611	3.58113	K562	EWSR1
chr20	50960351	50960433	+	intron-Distal	3.81162	7.58625	K562	AGGF1
chr20	50994251	50994331	+	intron-Distal	4.08630	7.91000	K562	TIA1
chr20	51040719	51040779	+	intron-Distal	4.85338	13.00776	K562	AGGF1
chr20	50994289	50994441	+	intron-Distal	3.23173	6.19428	K562	FUS
chr20	51176750	51176859	+	intron-Distal	3.84885	3.94496	K562	RBFOX2
chr20	50959914	50960014	+	intron-Distal	4.13301	9.44663	K562	HNRNPL
chr20	51228067	51228108	+	intron-Distal	5.10733	5.81225	K562	PTBP1
chr20	50861159	50861172	+	intron-Distal	5.02656	9.22379	K562	HNRNPL
chr20	51040945	51040974	+	intron-Distal	3.72911	5.16718	K562	AGGF1
chr20	50951336	50951410	+	intron-Distal	4.69345	6.96521	K562	TARDBP
chr20	51186048	51186083	+	intron-Distal	4.68556	5.05386	K562	PTBP1
chr20	51178042	51178158	+	intron-Distal	3.26403	3.90146	K562	KHSRP
chr20	51021842	51021976	+	intron-Distal	5.11779	9.76847	K562	HNRNPL
chr20	50861172	50861212	+	intron-Distal	5.11555	9.66189	K562	HNRNPL
chr20	51191197	51191348	+	intron-Distal	3.89620	3.37631	K562	HNRNPL
chr20	50994181	50994326	+	intron-Distal	4.31312	13.03519	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP4-723E3.1 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for RP4-723E3.1 is not available on ENCORE database.
No RBPs affect the gene expression of RP4-723E3.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-723E3.1 is not available on ENCORE database.

No RBPs affect the gene expression of RP4-723E3.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-723E3.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP4-723E3.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RP4-723E3.1	ENSG00000234948.1	chr20	+	50832005	50832097			50827183	50827279	50851307	50851471	-0.13800	0.00637	0.07475	excluded	K562	PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP4-723E3.1

General Information

Functions

Localization

Domains (AlphaFold: RP4-723E3.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP4-723E3.1 is not avaliable on ENCORE database.

16 proteins are bound to RP4-723E3.1 RNA:

eCLIP assay for RP4-723E3.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP4-723E3.1 is not available on ENCORE database.

No RBPs affect the gene expression of RP4-723E3.1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP4-723E3.1 is not available on ENCORE database.

1 RBPs can affect the splicing of RP4-723E3.1 :

The Knockdown/knockout RNA-Seq assay for RP4-723E3.1 is not avaliable on ENCORE database.