RP11-946L20.2

General Information

Gene Name : RP11-946L20.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-946L20.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-946L20.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-946L20.2 RNA is bound by 7 proteins.

eCLIP assay for RP11-946L20.2 is not avaliable on ENCORE database.

7 proteins are bound to RP11-946L20.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	112005121	112005216	-	intron-Distal	5.63232	11.58578	K562	TARDBP
chr8	112006932	112007006	-	intron-Distal	3.42879	4.02241	K562	EXOSC5
chr8	111981206	111981251	-	intron-Distal	3.81149	3.29026	K562	KHDRBS1
chr8	112038840	112038921	-	intron-Distal	3.66771	6.48117	K562	KHSRP
chr8	112002458	112002547	-	intron-Distal	4.25119	13.52669	K562	TARDBP
chr8	112017759	112017863	-	intron-Distal	4.82610	5.46339	K562	IGF2BP2
chr8	111984806	111984903	-	intron-Distal	3.09781	4.03054	K562	KHDRBS1
chr8	112001771	112001907	-	intron-Distal	7.28199	30.53854	K562	QKI
chr8	112011773	112011911	-	intron-Distal	4.48423	6.58136	K562	KHDRBS1
chr8	111975770	111975877	-	intron-Distal	3.32688	4.76825	K562	KHSRP
chr8	111986348	111986463	-	intron-Distal	3.68631	5.87403	K562	KHDRBS1
chr8	112015921	112016015	-	intron-Distal	3.94910	4.04407	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-946L20.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-946L20.2 is not available on ENCORE database.
10 RBPs can affect the levels of RP11-946L20.2.

The Knockdown/knockout RNA-Seq assay for RP11-946L20.2 is not available on ENCORE database.

10 RBPs can affect the gene expression of RP11-946L20.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-946L20.2	ENSG00000253877.1	16.03330	1.16330	3.78470	2.96660	2.17190	HepG2	CNOT7
RP11-946L20.2	ENSG00000253877.1	15.41860	68.64360	-2.15450	7.24280	6.32670	K562	FXR1
RP11-946L20.2	ENSG00000253877.1	77.71020	160.41790	-1.04570	4.87690	3.60460	K562	MBNL1
RP11-946L20.2	ENSG00000253877.1	15.84590	41.98600	-1.40580	2.27850	1.59490	K562	PRPF8
RP11-946L20.2	ENSG00000253877.1	68.96740	113.95140	-0.72440	2.13620	1.42020	K562	PUF60
RP11-946L20.2	ENSG00000253877.1	78.56960	130.38380	-0.73070	2.50110	1.93280	K562	RBM15
RP11-946L20.2	ENSG00000253877.1	39.45320	83.90270	-1.08860	3.40200	2.17450	K562	NELFE
RP11-946L20.2	ENSG00000253877.1	46.44370	80.34800	-0.79080	2.10480	1.36060	K562	SF3B4
RP11-946L20.2	ENSG00000253877.1	47.80470	81.48590	-0.76940	1.90420	1.30490	K562	SRSF1
RP11-946L20.2	ENSG00000253877.1	15.50700	37.10440	-1.25870	2.04730	1.33980	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-946L20.2 is not available on ENCORE database.

2 RBPs can affect the splicing of RP11-946L20.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	RP11-946L20.2	ENSG00000253877.1	chr8	-	112027132	112027261			112017758	112017878	112039534	112039662	-0.37100	0.00004	0.00132	excluded	K562	SRSF1
SE	RP11-946L20.2	ENSG00000253877.1	chr8	-	112027132	112027261			112017758	112017878	112039534	112039662	-0.36600	0.00006	0.00501	excluded	K562	HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-946L20.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-946L20.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-946L20.2 is not avaliable on ENCORE database.

7 proteins are bound to RP11-946L20.2 RNA:

eCLIP assay for RP11-946L20.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-946L20.2 is not available on ENCORE database.

10 RBPs can affect the gene expression of RP11-946L20.2 :

The Knockdown/knockout RNA-Seq assay for RP11-946L20.2 is not available on ENCORE database.

2 RBPs can affect the splicing of RP11-946L20.2 :

The Knockdown/knockout RNA-Seq assay for RP11-946L20.2 is not avaliable on ENCORE database.