RP1-59M18.2

General Information

Gene Name : RP1-59M18.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP1-59M18.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP1-59M18.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP1-59M18.2 RNA is bound by 28 proteins.

eCLIP assay for RP1-59M18.2 is not avaliable on ENCORE database.

28 proteins are bound to RP1-59M18.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	18034223	18034363	-	5'-UTR,intron-Distal	5.13087	34.70620	HepG2	RBFOX2
chr11	18029830	18029886	-	intron-Distal	3.98797	3.22073	HepG2	KHSRP
chr11	18033374	18033431	-	intron-Distal	3.88201	10.38189	HepG2	RBFOX2
chr11	18033818	18033905	-	intron-Distal	3.72696	19.20622	HepG2	RBFOX2
chr11	18033905	18033942	-	intron-Distal	4.51341	28.01460	HepG2	RBFOX2
chr11	18033833	18033917	-	intron-Distal	3.48762	6.05428	K562	RBFOX2
chr11	18033916	18033963	-	intron-Distal	3.40644	3.92899	HepG2	PRPF4
chr11	18034185	18034293	-	5'-UTR,intron-Distal	3.69816	3.01533	HepG2	SRSF1
chr11	18033852	18033898	-	intron-Distal	4.16833	6.29936	HepG2	HNRNPUL1
chr11	18032449	18032521	-	intron-Distal	4.75195	7.61813	HepG2	FUS
chr11	18033831	18033907	-	intron-Distal	5.21180	9.54146	K562	CSTF2T
chr11	18033582	18033641	-	intron-Distal	4.11995	3.34609	K562	TARDBP
chr11	18034228	18034328	-	5'-UTR,intron-Distal	4.39497	9.79356	K562	CSTF2T
chr11	18022310	18022405	-	CDS,intron-Distal,intron-Proximal	6.85150	22.24632	HepG2	QKI
chr11	18033826	18033946	-	intron-Distal	3.21655	6.64193	HepG2	GTF2F1
chr11	18025953	18026018	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.71726	6.01989	HepG2	PRPF8
chr11	18033336	18033433	-	intron-Distal	3.89792	10.63003	HepG2	HNRNPM
chr11	18033343	18033374	-	intron-Distal	3.41625	5.32645	HepG2	RBFOX2
chr11	18033917	18033983	-	intron-Distal	3.37618	4.65362	K562	RBFOX2
chr11	18034178	18034258	-	5'-UTR,intron-Distal	3.12987	9.47715	HepG2	CSTF2T
chr11	18034210	18034348	-	5'-UTR,intron-Distal	3.36487	19.45191	HepG2	FAM120A
chr11	18033290	18033335	-	intron-Distal	4.06972	3.48768	HepG2	KHSRP
chr11	18034245	18034293	-	5'-UTR,intron-Distal	5.05876	6.74317	HepG2	HNRNPUL1
chr11	18034229	18034327	-	5'-UTR,intron-Distal	3.07982	6.10085	HepG2	DGCR8
chr11	18034193	18034327	-	5'-UTR,intron-Distal	4.16148	5.62092	K562	RBFOX2
chr11	18034255	18034329	-	5'-UTR,intron-Distal	4.69338	4.31089	HepG2	FKBP4
chr11	18022042	18022088	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.99766	12.68282	HepG2	PPIG
chr11	18034235	18034338	-	5'-UTR,intron-Distal	6.13847	17.20631	HepG2	GTF2F1
chr11	18034258	18034338	-	5'-UTR,intron-Distal	3.00415	12.23287	HepG2	CSTF2T
chr11	18022044	18022087	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.14792	9.80976	HepG2	BCLAF1
chr11	18028227	18028297	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.04116	5.24517	HepG2	BUD13
chr11	18033942	18033980	-	intron-Distal	5.09948	34.00346	HepG2	RBFOX2
chr11	18033274	18033324	-	intron-Distal	3.01718	3.93303	HepG2	HNRNPM
chr11	18034259	18034350	-	5'-UTR,intron-Distal	4.97871	4.59452	HepG2	PCBP2
chr11	18034006	18034104	-	5'-UTR,intron-Distal	3.70219	10.87746	HepG2	CSTF2T
chr11	18029577	18029676	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.90324	6.35159	HepG2	SF3A3
chr11	18034382	18034444	-	5'-UTR,CDS,intron-Distal	4.15696	8.82190	HepG2	PRPF4
chr11	18029471	18029530	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.20736	6.18341	HepG2	PRPF8
chr11	18029680	18029740	-	intron-Distal,intron-Proximal	3.10016	3.42396	HepG2	U2AF2
chr11	18033899	18033954	-	intron-Distal	4.37356	3.48768	HepG2	KHSRP
chr11	18034265	18034327	-	5'-UTR,intron-Distal	4.37441	4.91655	HepG2	TAF15
chr11	18029485	18029553	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.37282	8.02162	HepG2	BCLAF1
chr11	18022043	18022092	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.53970	6.85891	K562	DDX24
chr11	18032608	18032708	-	intron-Distal	4.19119	4.66266	K562	TARDBP
chr11	18033267	18033331	-	intron-Distal	3.30313	4.26550	HepG2	DROSHA
chr11	18033664	18033710	-	intron-Distal	4.15468	4.00239	HepG2	KHSRP
chr11	18034225	18034364	-	5'-UTR,intron-Distal	5.05705	30.64598	HepG2	PRPF4
chr11	18034220	18034295	-	5'-UTR,intron-Distal	3.21599	5.99170	HepG2	FASTKD2
chr11	18034211	18034332	-	5'-UTR,intron-Distal	3.55091	14.45403	HepG2	EFTUD2
chr11	18033143	18033210	-	intron-Distal	3.85622	8.93039	HepG2	HNRNPM
chr11	18034381	18034469	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.56442	6.14786	HepG2	NCBP2
chr11	18034199	18034348	-	5'-UTR,intron-Distal	3.48652	8.87615	HepG2	DROSHA
chr11	18034256	18034319	-	5'-UTR,intron-Distal	4.24874	5.76824	HepG2	CDC40
chr11	18034385	18034415	-	5'-UTR,CDS,intron-Distal	5.43078	11.11545	HepG2	RBFOX2
chr11	18034052	18034167	-	5'-UTR,intron-Distal	3.33168	4.52619	HepG2	SRSF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP1-59M18.2 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for RP1-59M18.2 is not available on ENCORE database.
No RBPs affect the gene expression of RP1-59M18.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-59M18.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP1-59M18.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-59M18.2 is not available on ENCORE database.

1 RBPs can affect the splicing of RP1-59M18.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	RP1-59M18.2	ENSG00000255448.1	chr11	-	18025987	18026098			18025987	18026082	18028137	18028293	0.07900	0.00085	0.00600	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP1-59M18.2

General Information

Functions

Localization

Domains (AlphaFold: RP1-59M18.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP1-59M18.2 is not avaliable on ENCORE database.

28 proteins are bound to RP1-59M18.2 RNA:

eCLIP assay for RP1-59M18.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP1-59M18.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP1-59M18.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-59M18.2 is not available on ENCORE database.

1 RBPs can affect the splicing of RP1-59M18.2 :

The Knockdown/knockout RNA-Seq assay for RP1-59M18.2 is not avaliable on ENCORE database.