PPP1R3F

General Information

Gene Name       : PPP1R3F
Gene ID             : ENSG00000049769.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP1R3F)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPP1R3FENSG00000049769.120.440.660.55ENCSR000AEF
HepG2PPP1R3FENSG00000049769.120.000.060.03ENCSR985KAT
K562PPP1R3FENSG00000049769.120.230.110.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP1R3F is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP1R3F RNA is bound by 5 proteins.  







eCLIP assay for PPP1R3F is not avaliable on ENCORE database.





5 proteins are bound to PPP1R3F RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX4912707349127114+5'-UTR,CDS,intron-Distal3.645274.13694HepG2RBM15
chrX4912677949126839+CDS,intron-Distal4.363975.76695HepG2RBM15
chrX4912688349126949+CDS,intron-Distal4.663635.17013K562RBM15
chrX4912690549126970+CDS,intron-Distal4.976756.52076HepG2RBM15
chrX4912677849126840+CDS,intron-Distal4.401373.81597K562RBM15
chrX4913207749132209+intron-Distal4.270007.15804K562CPSF6
chrX4913224849132335+intron-Distal3.909603.70058K562CSTF2T
chrX4913224449132350+intron-Distal3.915793.69311HepG2CSTF2
chrX4913143049131588+intron-Distal3.473613.00914HepG2PTBP1
chrX4913174249131838+intron-Distal3.899074.22415K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP1R3F is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP1R3F is not available on ENCORE database.

  • 26 RBPs can affect the levels of PPP1R3F.  








The Knockdown/knockout RNA-Seq assay for PPP1R3F is not available on ENCORE database.





26 RBPs can affect the gene expression of PPP1R3F :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP1R3FENSG00000049769.841.7608014.459301.530102.303501.81370HepG2AKAP1
PPP1R3FENSG00000049769.824.741104.503502.457703.123602.49190HepG2BOP1
PPP1R3FENSG00000049769.844.1934012.796001.788003.213802.38530HepG2CNOT7
PPP1R3FENSG00000049769.819.842702.645102.907103.332102.16070HepG2CSTF2
PPP1R3FENSG00000049769.874.4907013.849602.427107.652506.65940HepG2DDX3X
PPP1R3FENSG00000049769.846.3547011.900001.961603.869903.14940HepG2DDX6
PPP1R3FENSG00000049769.838.4086011.436901.747602.971202.35670HepG2EIF2S1
PPP1R3FENSG00000049769.837.4412012.637701.566802.623602.00010HepG2EIF4A3
PPP1R3FENSG00000049769.849.8362012.953201.943804.232703.51690HepG2ETF1
PPP1R3FENSG00000049769.865.179308.528602.933906.901205.74270HepG2FIP1L1
PPP1R3FENSG00000049769.824.858804.142302.585102.260901.35100HepG2FTO
PPP1R3FENSG00000049769.828.272605.673602.317003.201702.51320HepG2HNRNPA1
PPP1R3FENSG00000049769.842.422506.269202.758406.600605.69880HepG2HNRNPU
PPP1R3FENSG00000049769.838.6205015.533601.313902.008001.30850HepG2LARP4
PPP1R3FENSG00000049769.843.8756012.757001.782003.542502.94040HepG2PTBP1
PPP1R3FENSG00000049769.830.309407.861201.946803.217302.58860HepG2PUM1
PPP1R3FENSG00000049769.835.8120012.545101.513202.288701.67010HepG2RBM25
PPP1R3FENSG00000049769.842.409604.922503.106803.601502.70590HepG2SNRNP70
PPP1R3FENSG00000049769.827.707707.311701.921902.825902.19380HepG2SRSF5
PPP1R3FENSG00000049769.819.366505.452401.828502.015601.41110HepG2SRSF7
PPP1R3FENSG00000049769.842.0668010.610801.987004.235303.62970HepG2SSB
PPP1R3FENSG00000049769.831.0367011.178201.473202.398801.38430HepG2STIP1
PPP1R3FENSG00000049769.821.920604.190602.387002.151101.54500HepG2SUPV3L1
PPP1R3FENSG00000049769.825.227508.607101.551302.095601.51560K562DDX47
PPP1R3FENSG00000049769.842.718408.185602.383605.511204.29030K562FIP1L1
PPP1R3FENSG00000049769.850.0580011.508202.120805.521804.24500K562HNRNPU
PPP1R3FENSG00000049769.870.0678015.349102.190506.366205.10130K562PCBP3
PPP1R3FENSG00000049769.849.0171011.771102.057904.949603.87410K562POLR2G
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP1R3F is not available on ENCORE database.






No RBPs affect the alternative splcing events of PPP1R3F on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PPP1R3F is not avaliable on ENCORE database.