MBOAT1

General Information

Gene Name       : MBOAT1
Gene ID             : ENSG00000172197.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MBOAT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MBOAT1ENSG00000172197.1013.139.0411.09ENCSR000AEF
HepG2MBOAT1ENSG00000172197.100.030.020.03ENCSR985KAT
K562MBOAT1ENSG00000172197.106.916.956.93ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MBOAT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MBOAT1 RNA is bound by 6 proteins.  







eCLIP assay for MBOAT1 is not avaliable on ENCORE database.





6 proteins are bound to MBOAT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62010194320102049-3'-UTR,intron-Distal3.291894.44982K562UPF1
chr62012479620124858-CDS,intron-Distal,intron-Proximal3.961419.10472K562AQR
chr62014439120144463-CDS,intron-Distal,intron-Proximal4.281204.22101K562PRPF8
chr62010986720109941-CDS,intron-Distal3.568943.20659K562SND1
chr62012478520124882-CDS,intron-Distal,intron-Proximal3.024563.65461K562BUD13
chr62020539420205471-intron-Distal4.887057.08067K562PTBP1
chr62012592820126013-intron-Distal4.674409.76362K562PRPF8
chr62012597220126025-intron-Distal4.888898.69247K562AQR
chr62012566720125749-intron-Distal4.192767.08156K562PRPF8
chr62012591420125972-intron-Distal3.6236312.16989K562AQR
chr62012587520125928-intron-Distal4.127147.35008K562PRPF8
chr62016866720168770-intron-Distal5.213097.72823K562PTBP1
chr62012493820125001-intron-Distal4.734823.62536K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MBOAT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MBOAT1 is not available on ENCORE database.

  • 17 RBPs can affect the levels of MBOAT1.  








The Knockdown/knockout RNA-Seq assay for MBOAT1 is not available on ENCORE database.





17 RBPs can affect the gene expression of MBOAT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MBOAT1ENSG00000172197.920.136603.145202.678503.125702.41380HepG2PUM2
MBOAT1ENSG00000172197.9540.86950422.044200.357802.633001.55530K562CPEB4
MBOAT1ENSG00000172197.9208.87210287.39440-0.460402.678201.38220K562DDX27
MBOAT1ENSG00000172197.9873.03100357.012301.2900028.8287026.94960K562EIF2S2
MBOAT1ENSG00000172197.9277.47520409.68830-0.562204.248003.52130K562FXR1
MBOAT1ENSG00000172197.9353.62200475.75710-0.428002.298901.60670K562GRSF1
MBOAT1ENSG00000172197.9172.14890246.27490-0.516602.186201.64690K562HNRNPC
MBOAT1ENSG00000172197.9722.04190358.206201.0112011.501709.90930K562HSPD1
MBOAT1ENSG00000172197.9321.88050464.23500-0.528303.383802.34910K562MATR3
MBOAT1ENSG00000172197.9910.32420679.096300.422704.353603.14300K562PUM2
MBOAT1ENSG00000172197.9252.87890433.45260-0.777405.846304.56500K562RBM22
MBOAT1ENSG00000172197.9312.24620456.10640-0.546702.515501.47910K562NELFE
MBOAT1ENSG00000172197.9245.54720370.66980-0.594102.933401.89910K562RPS3
MBOAT1ENSG00000172197.9264.43940442.97610-0.744305.368904.39060K562SRSF1
MBOAT1ENSG00000172197.9399.42620297.509700.424902.640001.39550K562SSB
MBOAT1ENSG00000172197.9278.61570448.38350-0.686505.143604.16450K562TARDBP
MBOAT1ENSG00000172197.9505.30840384.327700.394702.631701.84730K562U2AF2
MBOAT1ENSG00000172197.9203.05160314.84250-0.632803.506202.35290K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MBOAT1 is not available on ENCORE database.





1 RBPs can affect the splicing of MBOAT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMBOAT1ENSG00000172197.9chr6-2011369420113846201131062011323920115518201155830.052000.009500.07797includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MBOAT1 is not avaliable on ENCORE database.