KRT222

General Information

Gene Name       : KRT222
Gene ID             : ENSG00000213424.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KRT222)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KRT222ENSG00000213424.80.280.780.53ENCSR000AEF
HepG2KRT222ENSG00000213424.80.000.000.00ENCSR985KAT
K562KRT222ENSG00000213424.80.080.020.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KRT222 is not avaliable on ENCORE database.



Proteins bound to RNA

  • KRT222 RNA is bound by 18 proteins.  







eCLIP assay for KRT222 is not avaliable on ENCORE database.





18 proteins are bound to KRT222 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173878707738787170-3'-UTR,CDS,intron-Distal,intron-Proximal4.5487321.08522K562UCHL5
chr173878504238785215-3'-UTR,CDS,intron-Distal,intron-Proximal4.4310318.35227HepG2GRWD1
chr173878696538787010-3'-UTR,CDS,intron-Distal,intron-Proximal3.767215.99043HepG2GRWD1
chr173878854638788619-3'-UTR,CDS,intron-Distal,intron-Proximal4.3511813.34751HepG2GRWD1
chr173879265338792702-3'-UTR,CDS,intron-Distal3.957734.99016K562ZNF800
chr173879227638792354-3'-UTR,CDS,intron-Distal,intron-Proximal4.3262615.55920HepG2BCLAF1
chr173878507938785210-3'-UTR,CDS,intron-Distal3.0794613.08464K562ZNF800
chr173878847338788622-3'-UTR,CDS,intron-Distal,intron-Proximal3.9968517.03155K562UCHL5
chr173879218238792340-3'-UTR,CDS,intron-Distal,intron-Proximal3.4142512.13184K562ZNF800
chr173879218138792211-3'-UTR,CDS,intron-Distal,intron-Proximal3.830585.45876HepG2BCLAF1
chr173878786438787946-3'-UTR,CDS,intron-Distal,intron-Proximal3.958007.91821HepG2GRWD1
chr173879221238792355-3'-UTR,CDS,intron-Distal,intron-Proximal4.4620422.36757K562UCHL5
chr173879218238792212-3'-UTR,CDS,intron-Distal,intron-Proximal3.764006.44869K562UCHL5
chr173878503838785118-3'-UTR,CDS,intron-Distal,intron-Proximal4.3416415.57094K562GRWD1
chr173878501538785240-3'-UTR,CDS,intron-Distal,intron-Proximal5.1681342.42368K562UCHL5
chr173878521538785248-3'-UTR,CDS,intron-Distal3.065134.89942HepG2GRWD1
chr173878854538788620-3'-UTR,CDS,intron-Distal,intron-Proximal3.3291712.83517K562ZNF622
chr173878784338787865-3'-UTR,CDS,intron-Distal,intron-Proximal3.528924.40383K562UCHL5
chr173878501538785196-3'-UTR,CDS,intron-Distal,intron-Proximal5.0147524.90096HepG2BCLAF1
chr173878503638785207-3'-UTR,CDS,intron-Distal,intron-Proximal4.8053231.55711K562ZNF622
chr173879221138792276-3'-UTR,CDS,intron-Distal,intron-Proximal3.763228.74800HepG2BCLAF1
chr173879217938792283-3'-UTR,CDS,intron-Distal,intron-Proximal3.9170912.09952HepG2GRWD1
chr173878696338787017-3'-UTR,CDS,intron-Distal,intron-Proximal3.735138.13606K562UCHL5
chr173878854538788620-3'-UTR,CDS,intron-Distal,intron-Proximal3.750216.70305K562ZNF800
chr173878844738788546-3'-UTR,CDS,intron-Distal,intron-Proximal3.385068.83482HepG2GRWD1
chr173878784738787944-3'-UTR,CDS,intron-Distal3.181166.91872HepG2BCLAF1
chr173878702438787077-3'-UTR,CDS,intron-Distal,intron-Proximal5.0017014.74774K562UCHL5
chr173878814538788257-intron-Distal4.772827.47576K562KHSRP
chr173878798138788145-intron-Distal,intron-Proximal5.5159014.07420K562KHSRP
chr173879875538798776-CDS,intron-Distal3.465139.51439K562YBX3
chr173879413438794213-intron-Distal4.195493.48768HepG2KHSRP
chr173880015338800270-intron-Distal3.151454.47941HepG2HNRNPL
chr173879421338794298-intron-Distal3.612444.57207HepG2KHSRP
chr173879877038798867-5'-UTR,CDS,intron-Distal,intron-Proximal3.708699.96904K562SF3B4
chr173880207438802100-5'-UTR,intron-Distal,intron-Proximal3.342944.69091K562DDX3X
chr173880390038804025-intron-Distal,intron-Proximal4.281203.31283K562PRPF8
chr173879458638794711-intron-Distal5.6928822.20475HepG2PTBP1
chr173880010038800166-intron-Distal3.111603.90146K562KHSRP
chr173879373838793778-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.310053.28366HepG2BCLAF1
chr173879869938798823-5'-UTR,CDS,intron-Distal,intron-Proximal3.954823.73303HepG2UCHL5
chr173880402438804049-5'-UTR,intron-Distal4.281664.66602K562DDX3X
chr173879867138798757-CDS,intron-Distal,intron-Proximal3.300359.54841HepG2PRPF8
chr173880397338804038-5'-UTR,intron-Distal,intron-Proximal3.526554.54206HepG2PRPF8
chr173880090238800974-intron-Distal4.197336.54646HepG2QKI
chr173878487538784967-3'-UTR,intron-Distal,intron-Proximal4.334624.23889K562TIA1
chr173879901938799147-intron-Distal3.292916.22518HepG2HNRNPL
chr173878499238785042-3'-UTR,CDS,intron-Distal,intron-Proximal4.168133.34184HepG2GRWD1
chr173879457538794682-intron-Distal5.5653818.65645K562PTBP1
chr173880385338803981-5'-UTR,intron-Distal,intron-Proximal4.787887.37772HepG2EFTUD2
chr173879764938797686-3'-UTR,intron-Distal5.031564.75034HepG2XPO5
chr173878770238787798-intron-Distal,intron-Proximal4.110344.77518HepG2U2AF2
chr173880397338804028-5'-UTR,intron-Distal,intron-Proximal3.895794.00320K562AQR
chr173879872538798736-CDS,intron-Distal3.7133911.71300K562YBX3
chr173878811738788234-intron-Distal4.647015.07255HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KRT222 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KRT222 is not available on ENCORE database.

  • 3 RBPs can affect the levels of KRT222.  








The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.





3 RBPs can affect the gene expression of KRT222 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KRT222ENSG00000264058.10.399709.78960-4.614202.364901.39820HepG2AKAP8
KRT222ENSG00000264058.19.444901.077803.131401.756601.32950HepG2SRFBP1
KRT222ENSG00000264058.120.881200.935904.479605.278704.61480HepG2SSB
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KRT222 is not available on ENCORE database.





5 RBPs can affect the splicing of KRT222 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKRT222ENSG00000264058.1chr17-3878645938786538387850483878524538786965387871760.070000.000000.00001includedK562SRSF1
SEKRT222ENSG00000264058.1chr17-3878645938786538387850483878524538786965387871760.053000.000000.00059includedK562XRCC6
SEKRT222ENSG00000264058.1chr17-3878645938786538387850483878524538786965387871760.054000.000050.00715includedK562SUPV3L1
A3SSKRT222ENSG00000264058.1chr17-3878504838785292387850483878524538786965387872130.066000.000000.00000longerK562AQR
A3SSKRT222ENSG00000264058.1chr17-3878784338788058387878433878794538788446387886190.159000.000000.00000longerK562AQR
A3SSKRT222ENSG00000264058.1chr17-3878844638788638387884463878861938792182387924120.071000.000000.00000longerK562AQR
MXEKRT222ENSG00000264058.1chr17-3878568838785820387864593878653838785048387852453878696538787176-0.129000.010580.066232includedK562AQR
MXEKRT222ENSG00000264058.1chr17-3878568838785820387864593878653838785048387852453878696538787176-0.487000.000000.000052includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KRT222 is not avaliable on ENCORE database.