CUBN

General Information

Gene Name       : CUBN
Gene ID             : ENSG00000107611.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CUBN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CUBNENSG00000107611.150.000.010.01ENCSR000AEF
HepG2CUBNENSG00000107611.150.290.030.16ENCSR985KAT
K562CUBNENSG00000107611.150.120.060.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CUBN is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CUBN RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CUBN is not avaliable on ENCORE database.






NO known proteins are bound to CUBN RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CUBN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CUBN is not available on ENCORE database.

  • 29 RBPs can affect the levels of CUBN.  








The Knockdown/knockout RNA-Seq assay for CUBN is not available on ENCORE database.





29 RBPs can affect the gene expression of CUBN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CUBNENSG00000107611.1081.849605.589203.8722012.5190011.47080HepG2AKAP1
CUBNENSG00000107611.10166.148304.395305.2403036.4855034.17260HepG2CIRBP
CUBNENSG00000107611.1056.3983014.094902.000404.900604.00830HepG2CPSF6
CUBNENSG00000107611.1075.844806.356903.576605.187804.28740HepG2DDX21
CUBNENSG00000107611.1031.938404.756802.747103.904303.09350HepG2EIF4B
CUBNENSG00000107611.1049.5868014.369501.786903.998202.66180HepG2FUS
CUBNENSG00000107611.1021.047404.576502.201202.537701.89860HepG2G3BP1
CUBNENSG00000107611.1043.3522015.972201.440402.383801.78580HepG2GPKOW
CUBNENSG00000107611.1021.297304.611202.207402.161401.53870HepG2HNRNPK
CUBNENSG00000107611.1023.797606.022801.982202.175401.33260HepG2HNRNPM
CUBNENSG00000107611.1028.9023010.411101.473002.087901.55310HepG2HNRNPU
CUBNENSG00000107611.1023.310505.074302.199602.536701.92850HepG2NCBP2
CUBNENSG00000107611.1039.6507012.058801.717202.525701.48610HepG2NONO
CUBNENSG00000107611.1085.5210010.203503.067107.430306.18270HepG2PRPF8
CUBNENSG00000107611.1046.215508.212202.492403.577801.55870HepG2PSIP1
CUBNENSG00000107611.1023.191004.206402.462802.834702.28170HepG2PTBP1
CUBNENSG00000107611.1058.422809.472402.624607.441806.52590HepG2PUF60
CUBNENSG00000107611.1077.3216010.533702.8758011.8510010.72880HepG2PUS1
CUBNENSG00000107611.1035.185004.560202.947704.927104.12950HepG2QKI
CUBNENSG00000107611.10202.5604013.131303.9472013.8359012.36900HepG2RAVER1
CUBNENSG00000107611.1038.581402.933703.717005.078603.12650HepG2SF1
CUBNENSG00000107611.1063.2498015.655502.014306.244805.57550HepG2SRFBP1
CUBNENSG00000107611.1065.2643016.239902.006604.955503.58050HepG2SRSF3
CUBNENSG00000107611.1052.576307.470102.815105.862104.96360HepG2U2AF1
CUBNENSG00000107611.1050.772208.870502.516905.952405.10980K562HNRNPC
CUBNENSG00000107611.10109.2688020.656902.4031011.214009.63960K562HSPD1
CUBNENSG00000107611.10137.3512019.055602.8495016.5711014.53990K562PUF60
CUBNENSG00000107611.102.4939014.92740-2.581501.994901.47660K562RBM15
CUBNENSG00000107611.1033.099104.496902.879705.651804.50340K562U2AF2
CUBNENSG00000107611.1034.9831012.287301.509402.474601.79360K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CUBN is not available on ENCORE database.






No RBPs affect the alternative splcing events of CUBN on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CUBN is not avaliable on ENCORE database.