AP000721.4

General Information

Gene Name : AP000721.4
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AP000721.4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP000721.4 is not avaliable on ENCORE database.

Proteins bound to RNA

AP000721.4 RNA is bound by 26 proteins.

eCLIP assay for AP000721.4 is not avaliable on ENCORE database.

26 proteins are bound to AP000721.4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	63755816	63755874	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.91373	8.69525	HepG2	PPIG
chr11	63755807	63755870	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.58885	8.10680	HepG2	GRWD1
chr11	63755808	63755869	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.20579	7.06390	K562	ZNF622
chr11	63742100	63742145	+	5'-UTR	5.66090	9.66078	K562	EIF3G
chr11	63742099	63742122	+	5'-UTR	3.80775	3.23858	K562	LARP4
chr11	63742140	63742213	+	5'-UTR,CDS	3.25519	20.01162	K562	DROSHA
chr11	63742149	63742210	+	5'-UTR,CDS	5.70509	400.00000	HepG2	SUB1
chr11	63742128	63742216	+	5'-UTR,CDS	3.79943	25.84412	HepG2	DDX3X
chr11	63742095	63742125	+	5'-UTR	5.30811	400.00000	K562	DDX3X
chr11	63742119	63742146	+	5'-UTR	3.75689	22.69188	K562	NOLC1
chr11	63742108	63742119	+	5'-UTR	4.11997	10.99469	K562	NOLC1
chr11	63742129	63742175	+	5'-UTR,CDS	3.82970	28.33590	HepG2	LARP4
chr11	63742145	63742216	+	5'-UTR,CDS	4.70783	12.60526	K562	EIF3G
chr11	63742095	63742128	+	5'-UTR	6.09391	13.97750	HepG2	DDX3X
chr11	63742149	63742225	+	5'-UTR,CDS	4.06255	64.81079	K562	RPS3
chr11	63742151	63742173	+	5'-UTR,CDS	3.68608	400.00000	K562	DDX3X
chr11	63742123	63742149	+	5'-UTR	6.58838	400.00000	HepG2	SUB1
chr11	63742146	63742217	+	5'-UTR,CDS	4.55680	29.09126	HepG2	RPS3
chr11	63742129	63742151	+	5'-UTR	4.16302	400.00000	K562	DDX3X
chr11	63742108	63742258	+	5'-UTR,CDS	4.47946	72.19654	K562	GEMIN5
chr11	63742104	63742126	+	5'-UTR	4.57043	16.46769	K562	RPS3
chr11	63742228	63742254	+	CDS	3.42906	19.94727	K562	PABPC4
chr11	63742254	63742266	+	CDS	3.16434	7.83020	K562	PABPC4
chr11	63753937	63753986	+	CDS	4.08468	4.96634	HepG2	PPIG
chr11	63742175	63742227	+	CDS	4.11977	32.32508	HepG2	LARP4
chr11	63742173	63742226	+	CDS	3.66171	86.02791	K562	DDX3X
chr11	63742249	63742266	+	CDS	5.31908	16.50828	HepG2	LARP4
chr11	63742154	63742238	+	CDS	3.64261	4.51064	HepG2	AKAP1
chr11	63742171	63742228	+	CDS	3.35503	33.30602	K562	PABPC4
chr11	63742238	63742264	+	CDS	3.74516	32.06624	K562	RPS3
chr11	63742230	63742249	+	CDS	6.26723	18.05946	HepG2	LARP4
chr11	63742235	63742266	+	CDS	4.32651	11.73818	HepG2	RPS3
chr11	63742262	63742315	+	CDS,intron-Proximal	3.80392	6.32052	K562	AQR
chr11	63753916	63753988	+	5'-UTR,CDS,intron-Proximal	3.16339	6.97307	HepG2	NCBP2
chr11	63743813	63743840	+	3'-UTR,intron-Distal	5.90259	400.00000	K562	PABPC4
chr11	63743690	63743798	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.39654	71.19753	K562	RPS3
chr11	63743714	63743779	+	CDS,intron-Distal	3.44088	19.62244	K562	LIN28B
chr11	63743776	63743860	+	3'-UTR,CDS,intron-Distal	3.23622	7.43702	K562	GEMIN5
chr11	63743696	63743799	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.52585	82.19467	HepG2	LARP4
chr11	63743845	63743855	+	3'-UTR,intron-Distal	4.31914	12.35914	K562	PABPC4
chr11	63743703	63743767	+	CDS,intron-Distal	4.66094	6.38589	HepG2	AKAP1
chr11	63743795	63743854	+	3'-UTR,intron-Distal	4.77574	17.60924	K562	LARP4
chr11	63743941	63743991	+	3'-UTR,intron-Distal	4.24291	30.39911	K562	LARP4
chr11	63743810	63743839	+	3'-UTR,intron-Distal	3.48527	8.19167	K562	IGF2BP1
chr11	63743801	63743856	+	3'-UTR,intron-Distal	3.21500	4.24648	K562	METAP2
chr11	63743719	63743789	+	CDS,intron-Distal	3.75540	14.48335	K562	LARP4
chr11	63743863	63743893	+	3'-UTR,intron-Distal	5.49623	5.45096	K562	LARP4
chr11	63743918	63743993	+	3'-UTR,intron-Distal	4.97618	16.09084	HepG2	AKAP1
chr11	63743914	63743977	+	3'-UTR,intron-Distal	3.67949	14.69405	K562	PCBP1
chr11	63743779	63743800	+	3'-UTR,CDS,intron-Distal	3.72826	12.82638	K562	LIN28B
chr11	63743696	63743778	+	CDS,intron-Distal,intron-Proximal	4.11898	12.60829	K562	PCBP1
chr11	63743799	63743813	+	3'-UTR,intron-Distal	5.98000	400.00000	K562	PABPC4
chr11	63744022	63744155	+	intron-Distal	3.84891	9.92038	K562	CSTF2T
chr11	63743925	63743943	+	3'-UTR,intron-Distal	3.33620	76.73921	K562	YBX3
chr11	63743828	63743893	+	3'-UTR,intron-Distal	3.16352	3.44343	HepG2	AKAP1
chr11	63743778	63743850	+	3'-UTR,CDS,intron-Distal	3.73382	9.11663	K562	PCBP1
chr11	63743800	63743845	+	3'-UTR,intron-Distal	4.45680	38.84221	K562	LIN28B
chr11	63743809	63743863	+	3'-UTR,intron-Distal	3.07582	4.00968	HepG2	DDX3X
chr11	63743799	63743858	+	3'-UTR,intron-Distal	6.20535	47.92498	HepG2	LARP4
chr11	63743910	63743990	+	3'-UTR,intron-Distal	5.23139	51.88559	HepG2	LARP4
chr11	63743637	63743753	+	CDS,intron-Distal,intron-Proximal	3.55354	5.35619	K562	AQR
chr11	63743713	63743783	+	CDS,intron-Distal	3.65943	17.97486	HepG2	SUB1
chr11	63743696	63743745	+	CDS,intron-Distal,intron-Proximal	3.83457	4.92170	K562	PHF6
chr11	63743703	63743775	+	CDS,intron-Distal	3.76019	12.62098	K562	GEMIN5
chr11	63743859	63743913	+	3'-UTR,intron-Distal	3.26160	19.53852	K562	IGF2BP2
chr11	63744018	63744161	+	intron-Distal	4.04505	3.29239	HepG2	CSTF2
chr11	63744026	63744108	+	intron-Distal	5.30237	7.85254	K562	FMR1
chr11	63743916	63743925	+	3'-UTR,intron-Distal	3.54691	77.82429	K562	YBX3
chr11	63743858	63743910	+	3'-UTR,intron-Distal	5.50409	36.84113	HepG2	LARP4
chr11	63743896	63743903	+	3'-UTR,intron-Distal	3.64408	54.97704	K562	YBX3
chr11	63743718	63743759	+	CDS,intron-Distal	3.81783	49.96549	K562	PABPC4
chr11	63743855	63743910	+	3'-UTR,intron-Distal	3.47901	43.12647	K562	PABPC4
chr11	63743904	63743987	+	3'-UTR,intron-Distal	4.55263	4.62953	HepG2	IGF2BP3
chr11	63743759	63743774	+	CDS,intron-Distal	4.19686	59.81239	K562	PABPC4
chr11	63743920	63743983	+	3'-UTR,intron-Distal	3.27928	5.31125	HepG2	SUB1
chr11	63743886	63743896	+	3'-UTR,intron-Distal	3.74250	51.39639	K562	YBX3
chr11	63743909	63743993	+	3'-UTR,intron-Distal	3.01677	3.43210	K562	NCBP2
chr11	63743863	63743901	+	3'-UTR,intron-Distal	3.61824	4.95207	K562	GEMIN5
chr11	63743695	63743791	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.93461	27.34094	HepG2	RPS3
chr11	63743968	63743994	+	3'-UTR,intron-Distal	3.01231	18.57955	K562	PABPC4
chr11	63743791	63743850	+	3'-UTR,intron-Distal	4.31755	8.77766	HepG2	RPS3
chr11	63743695	63743713	+	CDS,intron-Distal,intron-Proximal	3.49060	11.53484	HepG2	SUB1
chr11	63743774	63743799	+	3'-UTR,CDS,intron-Distal	5.24670	87.08206	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AP000721.4 is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for AP000721.4 is not available on ENCORE database.
No RBPs affect the gene expression of AP000721.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000721.4 is not available on ENCORE database.

No RBPs affect the gene expression of AP000721.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000721.4 is not available on ENCORE database.

1 RBPs can affect the splicing of AP000721.4 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	AP000721.4	ENSG00000256100.1	chr11	+	63753612	63753986			63742091	63742266	63755808	63755818	-0.32500	0.00012	0.00313	excluded	K562	HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AP000721.4

General Information

Functions

Localization

Domains (AlphaFold: AP000721.4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP000721.4 is not avaliable on ENCORE database.

26 proteins are bound to AP000721.4 RNA:

eCLIP assay for AP000721.4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP000721.4 is not available on ENCORE database.

No RBPs affect the gene expression of AP000721.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000721.4 is not available on ENCORE database.

1 RBPs can affect the splicing of AP000721.4 :

The Knockdown/knockout RNA-Seq assay for AP000721.4 is not avaliable on ENCORE database.