AACSP1

General Information

Gene Name       : AACSP1
Gene ID             : ENSG00000250420.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AACSP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AACSP1ENSG00000250420.80.000.020.01ENCSR000AEF
HepG2AACSP1ENSG00000250420.80.070.080.08ENCSR985KAT
K562AACSP1ENSG00000250420.81.231.351.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AACSP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AACSP1 RNA is bound by 6 proteins.  







eCLIP assay for AACSP1 is not avaliable on ENCORE database.





6 proteins are bound to AACSP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5178217942178218057-intron-Distal5.2480812.89962K562EIF4G2
chr5178217689178217760-intron-Distal3.803933.07008K562NONO
chr5178210209178210298-intron-Distal5.1946312.98773K562EIF4G2
chr5178212176178212267-intron-Distal3.313616.97825K562TARDBP
chr5178218094178218142-intron-Distal4.9346910.08257K562EIF4G2
chr5178217637178217694-intron-Distal5.8917610.49187K562EIF4G2
chr5178210298178210344-intron-Distal5.272217.26071K562EIF4G2
chr5178194075178194131-intron-Distal,intron-Proximal4.9447510.64121K562AQR
chr5178205294178205385-intron-Distal3.824973.08314K562TARDBP
chr5178209345178209396-intron-Distal,intron-Proximal4.030193.82910K562NONO
chr5178217845178217894-intron-Distal5.290956.58769K562EIF4G2
chr5178217630178217761-intron-Distal3.747873.74713K562FUS
chr5178223522178223640-intron-Distal3.805933.34609K562TARDBP
chr5178210443178210571-intron-Distal5.7004613.16698K562TARDBP
chr5178220640178220704-intron-Distal4.170413.98553K562NONO
chr5178210303178210443-intron-Distal6.0775419.38796K562TARDBP
chr5178222938178222992-intron-Distal4.736866.93487K562ILF3
chr5178217757178217831-intron-Distal5.218927.51195K562TARDBP
chr5178221789178221868-intron-Distal4.255374.72743K562NONO
chr5178220761178220818-intron-Distal4.170413.30664K562NONO
chr5178193970178194018-intron-Distal3.388893.04871K562AQR
chr5178217547178217626-intron-Distal6.3495416.93072K562EIF4G2
chr5178217901178218046-intron-Distal6.0536618.07529K562TARDBP
chr5178221083178221178-intron-Distal4.7791613.73871K562TARDBP
chr5178221779178221851-intron-Distal4.794645.17678K562EIF4G2
chr5178217694178217805-intron-Distal6.9316522.92451K562EIF4G2
chr5178217831178217901-intron-Distal4.950917.00934K562TARDBP
chr5178194018178194075-intron-Distal,intron-Proximal3.693596.06472K562AQR
chr5178220956178221083-intron-Distal5.0174516.07949K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AACSP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AACSP1 is not available on ENCORE database.

  • 20 RBPs can affect the levels of AACSP1.  








The Knockdown/knockout RNA-Seq assay for AACSP1 is not available on ENCORE database.





20 RBPs can affect the gene expression of AACSP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AACSP1ENSG00000250420.488.300101.167106.2413019.7551017.76270HepG2CNOT7
AACSP1ENSG00000250420.419.550701.537603.668403.972603.18290HepG2G3BP1
AACSP1ENSG00000250420.410.892400.955603.510702.250701.54580HepG2PRPF4
AACSP1ENSG00000250420.420.017103.858702.374903.051802.43110HepG2PUF60
AACSP1ENSG00000250420.4225.08110161.957100.474702.152001.64080K562AGGF1
AACSP1ENSG00000250420.4119.90570197.47400-0.719802.733202.14810K562AQR
AACSP1ENSG00000250420.4120.83370193.54050-0.679603.077901.82440K562CCDC124
AACSP1ENSG00000250420.481.19560125.68750-0.630402.183601.59350K562DDX47
AACSP1ENSG00000250420.4102.00990155.20730-0.605502.182101.44960K562EIF4A3
AACSP1ENSG00000250420.464.58050161.40970-1.321607.692806.75120K562FXR1
AACSP1ENSG00000250420.4177.88050106.789100.736003.470502.26260K562HNRNPA1
AACSP1ENSG00000250420.4118.5341056.695001.063903.749003.06670K562HNRNPC
AACSP1ENSG00000250420.4216.64990118.245400.873505.340504.08660K562HNRNPU
AACSP1ENSG00000250420.470.53820126.70210-0.845003.408302.36990K562MATR3
AACSP1ENSG00000250420.433.7500078.94180-1.225903.249102.43490K562PRPF8
AACSP1ENSG00000250420.4100.4704050.837200.982703.040802.08680K562PSIP1
AACSP1ENSG00000250420.474.50490123.35160-0.727402.717102.05830K562PTBP1
AACSP1ENSG00000250420.443.5408088.10440-1.016802.373201.45480K562RPS3
AACSP1ENSG00000250420.445.57310120.92690-1.407906.272805.21960K562SRSF1
AACSP1ENSG00000250420.454.1122095.87100-0.825102.509901.74450K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AACSP1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AACSP1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AACSP1 is not avaliable on ENCORE database.