RPS24

General Information

Gene Name : RPS24
Gene ID : ENSG00000138326.19
Essential Gene : No

Functions

rRNA processing
Ribosome & basic translation

Localization(RBPImage: RPS24)

Nuclei
Nucleolus
Cytoplasm
Compartment/Organelle
ER
Cytosolic
Cell Cortex

Domains (AlphaFold: RPS24)

No checked domain (RRM, ZNF, KH, Helicase, Nuclease, dRBM or PUM_HD)

Antibody Validation

Bethyl Labs: A303-842A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPS24	ENSG00000138326.19	6950.38	4957.92	5954.15	ENCSR000AEF
HepG2	RPS24	ENSG00000138326.19	3308.59	4067.06	3687.82	ENCSR985KAT
K562	RPS24	ENSG00000138326.19	4484.14	4914.85	4699.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

RBP	Exp_UID	Cell_Line	ENCODE_ACCESSION	Control_ENCODE_ACCESSION	ENCODE_Antibody_ID	Antibody	Lot_num	Status	Project
RPS24	529	K562	ENCSR967IBA	ENCSR567ZND	ENCAB763EDX	A303-842A	1	Revoked	ENCODE3

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
RPS24	ENCAB763EDX	A303-842A	1			Released, ENCODE3

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project	Note
RPS24	K562	shRNA	BGKLV34-35,BGKLV34-36	BGKLV34-1,BGKLV34-2	38.0,33.3	NotSatisfied	ENCODE4	bad KD%
RPS24	HepG2	shRNA	BGHLV33-27,BGHLV33-28	BGHLV33-1,BGHLV33-2	40.8,38.8	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-23,BGKcLV04-24	BGKcLV04-1,BGKcLV04-2	0.0,0.0	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-23-D12,BGKcLV04-24-D12	BGKcLV04-1,BGKcLV04-2	22.7,37.2	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-24-D12,BGKcLV04-23-D20	BGKcLV04-1,BGKcLV04-2	37.2,0.0	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-23-D20,BGKcLV04-24-D20	BGKcLV04-1,BGKcLV04-2	0.0,0.0	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-24-D20,BGKcLV04-23-D30	BGKcLV04-1,BGKcLV04-2	0.0,	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-23-D30,BGKcLV04-24-D30	BGKcLV04-1,BGKcLV04-2		NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV04-24-D30,BGKcLV08-65	BGKcLV04-1,BGKcLV04-2	,0.0	NotSatisfied	ENCODE3
RPS24	K562	CRISPR	BGKcLV08-65,BGKcLV08-66	BGKcLV08-1,BGKcLV08-2	0.0,0.0	NotSatisfied	ENCODE4
RPS24	K562	CRISPR	BGKcLV48-67,BGKcLV48-68	BGKcLV48-1,BGKcLV48-2		Experimented	ENCORE2
RPS24	HepG2	CRISPR	BGHcLV05-27,BGHcLV05-28	BGHcLV05-1,BGHcLV05-2	38.5,37.7	NotSatisfied	ENCODE4
RPS24	HepG2	CRISPR	BGHcLV05-27-D13,BGHcLV05-28-D13	BGHcLV05-1,BGHcLV05-2	41.0,34.6	NotSatisfied	ENCODE4
RPS24	HepG2	CRISPR	BGHcLV05-28-D13,BGHcLV09-15	BGHcLV05-1,BGHcLV05-2	34.6,33.7	NotSatisfied	ENCODE4
RPS24	HepG2	CRISPR	BGHcLV09-15,BGHcLV09-16	BGHcLV09-1,BGHcLV09-2	33.7,44.5	NotSatisfied	ENCODE4

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

RPS24: Click to RBP Image Database

Nuclei

Nucleolus

Cytoplasm

Compartment/Organelle

ER

Cytosolic

Cell Cortex

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
RPS24	Product_ID: A303-842A Lot_ID: 1 Source: Bethyl Labs Target Name: RPS24-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPS24 is not avaliable on ENCORE database.

Proteins bound to RNA

RPS24 RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for RPS24 is not avaliable on ENCORE database.

43 proteins are bound to RPS24 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	79799980	79799983	+	3'-UTR,intron-Distal	3.52977	400.00000	K562	UCHL5
chr10	79800398	79800440	+	3'-UTR,intron-Distal	4.26301	400.00000	K562	ZNF622
chr10	79800377	79800396	+	3'-UTR,CDS,intron-Distal	3.51581	400.00000	K562	GRWD1
chr10	79800395	79800441	+	3'-UTR,intron-Distal	4.36735	400.00000	K562	PABPC4
chr10	79800397	79800407	+	3'-UTR,intron-Distal	4.43835	400.00000	HepG2	BCLAF1
chr10	79800374	79800384	+	3'-UTR,CDS,intron-Distal	3.91292	400.00000	K562	PUM1
chr10	79800384	79800435	+	3'-UTR,intron-Distal	4.28607	400.00000	K562	PUM1
chr10	79800395	79800398	+	3'-UTR,intron-Distal	4.04000	400.00000	K562	ZNF622
chr10	79800384	79800396	+	3'-UTR,intron-Distal	4.27683	400.00000	K562	UCHL5
chr10	79800396	79800446	+	3'-UTR,intron-Distal	4.38880	400.00000	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 213 entries

eCLIP assay for RPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPS24 is not available on ENCORE database.
138 RBPs can affect the levels of RPS24.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPS24 is not available on ENCORE database.

138 RBPs can affect the gene expression of RPS24 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPS24	ENSG00000138326.14	9135.57210	31850.39350	-1.80170	166.79810	163.66670	HepG2	SF3B4
RPS24	ENSG00000138326.14	9150.11640	30594.24890	-1.74140	136.17630	133.85160	HepG2	PTBP1
RPS24	ENSG00000138326.14	11027.05000	33245.80040	-1.59210	118.51000	116.54990	HepG2	SRSF1
RPS24	ENSG00000138326.14	11018.87950	34047.45680	-1.62760	116.28450	114.15200	HepG2	NELFE
RPS24	ENSG00000138326.14	14153.67210	33131.74970	-1.22700	66.91200	64.65000	HepG2	QKI
RPS24	ENSG00000138326.14	7947.68710	15773.83600	-0.98890	55.99780	53.95260	HepG2	PUS1
RPS24	ENSG00000138326.14	4908.25760	10605.28160	-1.11150	45.68350	44.10990	HepG2	TIAL1
RPS24	ENSG00000138326.14	16638.23750	9720.29040	0.77530	38.31920	36.34500	HepG2	SAFB2
RPS24	ENSG00000138326.14	6352.36250	34267.01990	-2.43150	37.17270	35.05830	HepG2	NCBP2
RPS24	ENSG00000138326.14	16644.78520	31712.40150	-0.93000	35.44320	33.71430	HepG2	RECQL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 172 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPS24 is not available on ENCORE database.

88 RBPs can affect the splicing of RPS24 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800505	0.12300	0.01653	included	HepG2	FASTKD2
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	-0.05400	0.00000	excluded	K562	SRSF1
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.16200	0.00000	included	K562	FTO
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	-0.08800	0.00000	excluded	K562	PRPF8
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.34400	0.00000	included	HepG2	RBM22
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.08700	0.00000	included	K562	WRN
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.07900	0.00323	included	K562	XRN2
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.11000	0.00000	included	K562	WDR3
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.27400	0.00000	included	HepG2	CSTF2
SE	RPS24	ENSG00000138326.14	chr10	+	79799961	79799983	79796951	79797062	79800372	79800455	0.46500	0.00000	included	HepG2	U2AF1

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPS24

General Information

Functions

Localization(RBPImage: RPS24)

Domains (AlphaFold: RPS24)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPS24 is not avaliable on ENCORE database.

43 proteins are bound to RPS24 RNA:

eCLIP assay for RPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPS24 is not available on ENCORE database.

138 RBPs can affect the gene expression of RPS24 :

The Knockdown/knockout RNA-Seq assay for RPS24 is not available on ENCORE database.

88 RBPs can affect the splicing of RPS24 :

The Knockdown/knockout RNA-Seq assay for RPS24 is not avaliable on ENCORE database.