USO1

General Information

Gene Name       : USO1
Gene ID             : ENSG00000138768.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USO1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USO1ENSG00000138768.1453.9546.9650.45ENCSR000AEF
HepG2USO1ENSG00000138768.1423.0047.8935.45ENCSR985KAT
K562USO1ENSG00000138768.1439.3448.1643.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USO1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • USO1 RNA is bound by 22 proteins.  







eCLIP assay for USO1 is not avaliable on ENCORE database.





22 proteins are bound to USO1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr47673464976734698+3'-UTR3.377543.81856K562IGF2BP1
chr47673528876735334+3'-UTR4.074738.84200K562PABPC4
chr47673471176734762+3'-UTR3.423244.53005K562YBX3
chr47673494376735010+3'-UTR3.593547.88291K562LIN28B
chr47673448376734553+3'-UTR4.346223.74511K562IGF2BP1
chr47664988476649955+5'-UTR4.1311010.57284K562UCHL5
chr47664996276650013+5'-UTR,CDS3.589068.11704K562UCHL5
chr47664995676650012+5'-UTR,CDS3.417189.18365HepG2GRSF1
chr47664995476650018+5'-UTR,CDS3.073803.04614K562FUS
chr47664984676649947+5'-UTR4.0206912.08458HepG2NCBP2
chr47664996376650008+5'-UTR,CDS3.921703.06853K562LIN28B
chr47672182376721899+CDS3.372797.03584HepG2GRWD1
chr47667867876678727+CDS,intron-Proximal4.518784.10368HepG2TRA2A
chr47672764676727705+CDS3.153716.02234K562UCHL5
chr47671490376714960+CDS3.419383.77614HepG2G3BP1
chr47672183776721883+CDS3.6997713.02953HepG2BCLAF1
chr47673014476730161+CDS4.563934.07825K562YBX3
chr47669159276691607+CDS5.6878411.17302HepG2BCLAF1
chr47673016176730178+CDS3.802493.86052K562YBX3
chr47667871876678725+CDS5.264127.04013HepG2BCLAF1
chr47672533176725395+CDS4.015703.36483HepG2G3BP1
chr47673017876730193+CDS3.692893.67697K562YBX3
chr47673337676733442+CDS3.377543.57974K562IGF2BP1
chr47669223376692291+CDS,intron-Proximal3.781226.07859HepG2LIN28B
chr47669158976691636+CDS,intron-Proximal4.629975.29009HepG2TRA2A
chr47669583076695870+CDS3.346093.55754HepG2U2AF2
chr47667870476678718+CDS4.008148.51432HepG2BCLAF1
chr47669164076691689+CDS3.033163.98324K562BUD13
chr47665001276650060+CDS4.027575.25366HepG2GRSF1
chr47672075576720809+CDS,intron-Proximal3.616374.57751HepG2U2AF2
chr47670392676703979+CDS4.3062415.58304HepG2BCLAF1
chr47669223176692292+CDS,intron-Proximal4.2191715.00402K562LIN28B
chr47669161976691688+CDS4.0524718.25481HepG2BCLAF1
chr47671185876711897+CDS3.211364.18806HepG2U2AF2
chr47672151776721565+CDS3.152283.80299HepG2GRWD1
chr47671129376711334+CDS,intron-Proximal3.166465.12722K562BUD13
chr47672764076727697+CDS4.9384418.25084HepG2BCLAF1
chr47669591976695948+CDS4.492744.42734K562UCHL5
chr47672638876726455+CDS4.7408925.32118HepG2BCLAF1
chr47670832176708355+CDS3.355038.81743K562YBX3
chr47673333776733360+CDS3.220396.86395HepG2BCLAF1
chr47672532976725367+CDS3.8397911.53232HepG2BCLAF1
chr47671128576711327+CDS,intron-Proximal3.192384.57751HepG2U2AF2
chr47672641376726445+CDS3.350303.61820HepG2HLTF
chr47671490376714960+CDS3.7824516.85915HepG2BCLAF1
chr47670821976708271+CDS3.034619.59772HepG2BCLAF1
chr47668992176689975+intron-Distal3.151733.23296HepG2SUGP2
chr47668977276689823+intron-Distal3.035964.86332HepG2SUGP2
chr47668300776683103+intron-Distal3.023433.51696K562KHSRP
chr47669572276695776+intron-Distal,intron-Proximal4.233595.19823K562KHSRP
chr47669543676695509+intron-Distal4.235177.22994K562KHSRP
chr47672139876721443+intron-Distal,intron-Proximal3.065883.48890K562KHSRP
chr47672094676721019+intron-Distal,intron-Proximal3.270074.08064K562KHSRP
chr47665063776650698+intron-Distal4.291024.71107K562CSTF2T
chr47672199676722098+intron-Distal,intron-Proximal3.251294.23631K562KHSRP
chr47671395776714020+intron-Distal3.075756.57140HepG2PCBP2
chr47669289376693001+intron-Distal4.311677.05443K562KHSRP
chr47669019976690268+intron-Distal4.521275.58061HepG2SUGP2
chr47672101976721077+intron-Distal3.125203.48890K562KHSRP
chr47669282576692893+intron-Distal4.199063.89294K562KHSRP
chr47668310776683220+intron-Distal4.097743.42844K562KHSRP
chr47672854676728629+intron-Distal5.6608811.90344HepG2QKI
chr47668292576683093+intron-Distal4.695046.08171HepG2QKI
chr47669064076690715+intron-Distal3.989463.24322HepG2MATR3
chr47672018576720260+intron-Distal3.515645.61949K562KHSRP
chr47668170776681785+intron-Distal4.444053.35169HepG2U2AF2
chr47671396176714048+intron-Distal4.480086.64835K562QKI
chr47672094776721012+intron-Distal,intron-Proximal4.077343.31110K562TIA1
chr47670913676709198+intron-Distal5.309095.81672HepG2U2AF2
chr47671437976714427+intron-Distal3.016874.40834HepG2QKI
chr47669551576695575+intron-Distal3.271574.30679K562KHSRP
chr47671394976714067+intron-Distal4.8661820.74540HepG2QKI
chr47668295176683074+intron-Distal6.7839917.97304K562QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USO1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USO1 is not available on ENCORE database.

  • 97 RBPs can affect the levels of USO1.  








The Knockdown/knockout RNA-Seq assay for USO1 is not available on ENCORE database.





97 RBPs can affect the gene expression of USO1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USO1ENSG00000138768.102594.651803143.77670-0.277004.724003.96950HepG2ACO1
USO1ENSG00000138768.101813.019502615.16010-0.528505.928504.54230HepG2ADAR
USO1ENSG00000138768.103127.851504500.96790-0.525104.774304.10010HepG2AKAP1
USO1ENSG00000138768.101865.786103158.45010-0.7594024.9844023.03110HepG2AKAP8L
USO1ENSG00000138768.102897.248903724.25130-0.362302.966502.15420HepG2ASCC1
USO1ENSG00000138768.101784.260002469.67250-0.469003.298202.27640HepG2BCCIP
USO1ENSG00000138768.102312.912504091.81310-0.8230016.1128014.84020HepG2BOP1
USO1ENSG00000138768.104819.092603635.291600.406606.005104.92550HepG2CALR
USO1ENSG00000138768.101839.775402650.43640-0.526703.104802.29130HepG2CNOT7
USO1ENSG00000138768.104936.439803756.501800.394004.105703.28330HepG2CPSF6
USO1ENSG00000138768.103350.899103809.28960-0.185002.976702.21180HepG2DAZAP1
USO1ENSG00000138768.102441.200002907.48950-0.252204.073103.08450HepG2DDX19B
USO1ENSG00000138768.103010.670402403.778600.324702.955602.25670HepG2DDX21
USO1ENSG00000138768.102559.235103703.49100-0.533204.880204.08100HepG2DDX6
USO1ENSG00000138768.102160.200702610.07310-0.272904.827104.00450HepG2DNAJC2
USO1ENSG00000138768.102492.312803028.90160-0.281302.514801.40340HepG2EIF2S2
USO1ENSG00000138768.102916.050503935.12480-0.432403.406702.69860HepG2EIF4A3
USO1ENSG00000138768.104706.124503757.907100.324505.696804.56990HepG2EIF4G1
USO1ENSG00000138768.104534.748903599.868800.333002.939602.10160HepG2EIF4G2
USO1ENSG00000138768.102702.783905147.13860-0.9293042.1954040.37030HepG2ETF1
USO1ENSG00000138768.102523.345603071.92810-0.283802.646101.82950HepG2EWSR1
USO1ENSG00000138768.103041.367802290.183800.409204.687403.25670HepG2FASTKD2
USO1ENSG00000138768.102883.083104031.30310-0.483604.292703.35130HepG2FIP1L1
USO1ENSG00000138768.102820.945603969.80140-0.492905.181104.25450HepG2FXR1
USO1ENSG00000138768.102366.169903682.87520-0.638307.198006.14950HepG2G3BP1
USO1ENSG00000138768.101430.451301967.04400-0.459604.456203.30960HepG2GEMIN5
USO1ENSG00000138768.101921.902202542.33090-0.403602.814301.78530HepG2GNB2L1
USO1ENSG00000138768.102336.583803001.33610-0.361205.309604.00150HepG2HDGF
USO1ENSG00000138768.102017.747602658.57760-0.397904.482703.68590HepG2HNRNPA1
USO1ENSG00000138768.102079.683402957.16840-0.507906.585605.55320HepG2HNRNPC
USO1ENSG00000138768.102752.894603257.64350-0.242903.041102.29140HepG2HNRNPF
USO1ENSG00000138768.102123.099403728.53910-0.8124014.4033012.93170HepG2HNRNPK
USO1ENSG00000138768.103013.187203470.03850-0.203703.555202.79830HepG2HNRNPL
USO1ENSG00000138768.101773.911902781.78270-0.6491010.366008.73780HepG2HNRNPM
USO1ENSG00000138768.102101.032902937.61790-0.4835011.4534010.29110HepG2HNRNPU
USO1ENSG00000138768.102557.170403743.66970-0.549906.231705.25580HepG2IGF2BP2
USO1ENSG00000138768.103990.249005358.82740-0.425402.214101.47810HepG2LARP4
USO1ENSG00000138768.102554.168803993.50450-0.644807.125006.14810HepG2MATR3
USO1ENSG00000138768.102458.601603263.23940-0.408504.761203.72010HepG2MSI2
USO1ENSG00000138768.102061.683004087.64990-0.9874016.5051015.04280HepG2NCBP2
USO1ENSG00000138768.102637.047003777.27190-0.518405.187204.14720HepG2NOL12
USO1ENSG00000138768.103061.538403657.15230-0.256503.607903.00100HepG2PTBP1
USO1ENSG00000138768.103074.884103605.67500-0.229701.964001.45030HepG2PUF60
USO1ENSG00000138768.103128.161403827.51100-0.291106.818505.97270HepG2PUM1
USO1ENSG00000138768.102613.431503202.12350-0.293105.248604.44920HepG2PUS1
USO1ENSG00000138768.103423.906503960.66220-0.210102.115201.55690HepG2QKI
USO1ENSG00000138768.103656.689504302.04670-0.234502.971902.44060HepG2RBM22
USO1ENSG00000138768.101758.202702438.30820-0.471803.563202.35950HepG2RCC2
USO1ENSG00000138768.102856.010204070.01100-0.5110013.0408012.02490HepG2NELFE
USO1ENSG00000138768.103002.299103790.74980-0.336406.227805.35430HepG2RECQL
USO1ENSG00000138768.102256.008803508.98880-0.637309.952908.79390HepG2RPLP0
USO1ENSG00000138768.101405.354302149.55180-0.613108.818607.79550HepG2RPS19
USO1ENSG00000138768.101910.845802769.43840-0.535405.053603.99160HepG2RPS2
USO1ENSG00000138768.101998.198802660.12730-0.412802.570701.79900HepG2RPS3A
USO1ENSG00000138768.103219.340302616.083200.299305.465804.61310HepG2SAFB2
USO1ENSG00000138768.102820.773103993.95370-0.501703.757602.96710HepG2SF3A3
USO1ENSG00000138768.103353.428403807.46330-0.183202.185401.65100HepG2SF3B4
USO1ENSG00000138768.103934.098303457.132000.186402.784602.08050HepG2SLBP
USO1ENSG00000138768.102125.803003050.80270-0.5212017.3351015.93610HepG2SMN1
USO1ENSG00000138768.103258.498704858.98810-0.5764020.5891019.55310HepG2SRFBP1
USO1ENSG00000138768.104982.982303974.209900.326207.070006.39710HepG2SRSF1
USO1ENSG00000138768.102514.658304328.03370-0.783309.141707.24110HepG2SRSF3
USO1ENSG00000138768.103023.360603559.99230-0.235703.483902.79640HepG2SRSF5
USO1ENSG00000138768.102635.719403200.45980-0.280103.940703.13180HepG2SRSF7
USO1ENSG00000138768.102649.856003716.11320-0.487902.621801.37210HepG2SSRP1
USO1ENSG00000138768.101566.140702313.56880-0.562904.464503.03130HepG2STIP1
USO1ENSG00000138768.103365.467704048.76610-0.266705.370104.55530HepG2SUCLG1
USO1ENSG00000138768.103305.831902722.614700.279902.869601.91110HepG2SUPT6H
USO1ENSG00000138768.102873.999103572.29300-0.313804.491903.80390HepG2TAF15
USO1ENSG00000138768.10950.105501620.28990-0.770108.492106.93720HepG2TFIP11
USO1ENSG00000138768.101884.938602854.47350-0.5987011.3074010.41740HepG2TIAL1
USO1ENSG00000138768.10916.755601428.04220-0.639406.437805.27300HepG2UCHL5
USO1ENSG00000138768.102181.198403542.02970-0.6995025.3432023.66540HepG2UPF1
USO1ENSG00000138768.101823.556303419.68530-0.9071038.7105036.83510HepG2UTP3
USO1ENSG00000138768.102654.882103095.07160-0.221303.508002.76540HepG2ZC3H8
USO1ENSG00000138768.105909.383107066.85310-0.258104.528503.83430K562AGGF1
USO1ENSG00000138768.105928.603407353.37990-0.310703.064302.37540K562AKAP8L
USO1ENSG00000138768.103142.393605783.09570-0.8800018.2913016.94990K562AQR
USO1ENSG00000138768.101753.211402144.48450-0.290603.482602.27460K562CSTF2
USO1ENSG00000138768.103112.570503715.63420-0.255503.501202.13590K562DDX21
USO1ENSG00000138768.109305.073907912.770500.233703.278302.31530K562DKC1
USO1ENSG00000138768.102625.314503459.77810-0.398206.600905.38670K562EIF3G
USO1ENSG00000138768.103094.182303908.49790-0.337102.353601.59530K562EIF4A3
USO1ENSG00000138768.102792.824403519.91120-0.333803.576802.23570K562EIF4B
USO1ENSG00000138768.105534.881507060.98830-0.351306.584005.15660K562EIF4G2
USO1ENSG00000138768.103922.946503058.650900.358903.572802.02410K562FUS
USO1ENSG00000138768.102422.878304064.69070-0.7464019.3416017.85910K562FXR1
USO1ENSG00000138768.106641.099904586.395700.534004.421303.48320K562G3BP2
USO1ENSG00000138768.103495.354104070.81660-0.219902.382201.33200K562GLRX3
USO1ENSG00000138768.103576.777404506.07280-0.333203.806002.92400K562GRSF1
USO1ENSG00000138768.102516.461603130.39870-0.314903.054002.43020K562HNRNPC
USO1ENSG00000138768.104147.604905647.50000-0.445306.297404.64110K562HNRNPL
USO1ENSG00000138768.107074.242605269.630900.424804.871603.82350K562HSPD1
USO1ENSG00000138768.103737.497005084.96770-0.444202.737301.90290K562MAGOH
USO1ENSG00000138768.103781.378505075.09340-0.424502.453901.58960K562MATR3
USO1ENSG00000138768.103648.503004279.95160-0.230303.676402.75440K562MTPAP
USO1ENSG00000138768.103824.078404755.30510-0.314409.376408.11150K562NSUN2
USO1ENSG00000138768.103422.644204524.89220-0.402802.218401.34720K562PCBP2
USO1ENSG00000138768.103563.314404940.14760-0.471302.985802.29840K562PTBP1
USO1ENSG00000138768.106847.793508028.89980-0.229603.224402.18780K562PUM2
USO1ENSG00000138768.103289.885004738.59790-0.526402.756201.91820K562RBM22
USO1ENSG00000138768.103344.730304986.24530-0.576103.514902.26170K562NELFE
USO1ENSG00000138768.103067.770202284.793200.425003.641302.70140K562RPS19
USO1ENSG00000138768.103419.269404621.44340-0.434704.421003.11810K562RPS3
USO1ENSG00000138768.104107.690604692.42940-0.192002.028701.32290K562SF3A3
USO1ENSG00000138768.103562.354804769.99130-0.421206.482405.13490K562SF3B4
USO1ENSG00000138768.104066.433004807.50940-0.241504.594003.42210K562SRPK2
USO1ENSG00000138768.103587.578104461.68530-0.314603.486002.28590K562SRSF4
USO1ENSG00000138768.103256.010704901.79600-0.590203.369502.58640K562TARDBP
USO1ENSG00000138768.101487.962001979.66390-0.411903.274901.43500K562TFIP11
USO1ENSG00000138768.105924.206004592.199700.367305.280404.17620K562U2AF2
USO1ENSG00000138768.102827.188802298.531100.298602.329201.40300K562UCHL5
USO1ENSG00000138768.105627.134005042.159200.158302.068801.44120K562UPF1
USO1ENSG00000138768.103813.441804486.57190-0.234504.041103.03220K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USO1 is not available on ENCORE database.





25 RBPs can affect the splicing of USO1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.057000.000020.00080includedK562SRSF1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.098000.000030.00221includedK562PRPF8
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.091000.000000.00030excludedHepG2RBM22
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.108000.000920.01901excludedHepG2U2AF1
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.074000.001910.04563excludedHepG2HNRNPK
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.253000.000000.00001includedHepG2TBRG4
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.070000.000060.00889excludedHepG2QKI
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720913-0.099000.006980.06904excludedHepG2U2AF2
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.109000.000000.00000excludedHepG2AKAP1
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.092000.000000.00007excludedHepG2DDX3X
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.340000.000000.00001includedHepG2SDAD1
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.067000.000150.01130excludedHepG2PTBP1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.296000.000000.00001includedHepG2FTO
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.067000.001100.05480includedK562EFTUD2
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.131000.000310.03999includedHepG2LARP4
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.079000.000140.01412excludedHepG2HNRNPL
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.101000.000080.00296includedHepG2SRSF1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.097000.000810.08079includedHepG2SSB
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.128000.000080.00931includedHepG2TIAL1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.255000.000000.00016includedHepG2SUPV3L1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.092000.000280.01722includedHepG2PCBP1
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.121000.000040.02649excludedHepG2SMNDC1
SEUSO1ENSG00000138768.10chr4+7671648876716509767148427671505476720774767208850.091000.000940.05829includedHepG2SRSF9
SEUSO1ENSG00000138768.10chr4+767164887671650976714842767150547672077476720885-0.153000.000000.00007excludedHepG2SLTM
SEUSO1ENSG00000138768.10chr4+767333127673352876731584767316927673435876735382-0.127000.000350.00780excludedK562HNRNPC
A3SSUSO1ENSG00000138768.10chr4+7672174576721952767217707672195276721496767216220.091000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USO1 is not avaliable on ENCORE database.