RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr8 | 71520477 | 71520564 | - | 5'-UTR,intron-Distal | 4.27990 | 58.70841 | HepG2 | DDX3X |
chr8 | 71520564 | 71520613 | - | 5'-UTR,intron-Distal,intron-Proximal | 4.31279 | 40.35376 | HepG2 | DDX3X |
chr8 | 71520418 | 71520477 | - | 5'-UTR,CDS,intron-Distal,intron-Proximal | 4.33163 | 36.29875 | HepG2 | DDX3X |
chr8 | 71495422 | 71495471 | - | CDS,intron-Distal | 5.07022 | 28.22880 | HepG2 | SND1 |
chr8 | 71495471 | 71495500 | - | CDS,intron-Distal | 5.11643 | 20.93432 | HepG2 | SND1 |
chr8 | 71485850 | 71485962 | - | 3'-UTR,intron-Distal | 4.42771 | 20.69836 | K562 | IGF2BP1 |
chr8 | 71520249 | 71520358 | - | 5'-UTR,CDS,intron-Distal,intron-Proximal | 3.23214 | 14.71704 | HepG2 | PRPF8 |
chr8 | 71498785 | 71498873 | - | intron-Distal | 5.78431 | 13.98859 | K562 | EXOSC5 |
chr8 | 71495913 | 71496009 | - | CDS,intron-Distal,intron-Proximal | 3.51622 | 13.34779 | K562 | SND1 |
chr8 | 71520421 | 71520572 | - | 5'-UTR,CDS,intron-Distal,intron-Proximal | 3.19336 | 12.75419 | HepG2 | RPS3 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
TRAM1 | ENSG00000067167.3 | 1949.34830 | 5037.65960 | -1.36980 | 44.09380 | 41.46080 | HepG2 | NOL12 | |
TRAM1 | ENSG00000067167.3 | 2386.95360 | 5104.41710 | -1.09660 | 40.79120 | 39.06270 | HepG2 | PUM1 | |
TRAM1 | ENSG00000067167.3 | 1814.90480 | 3643.05530 | -1.00530 | 39.01150 | 37.37710 | HepG2 | ACO1 | |
TRAM1 | ENSG00000067167.3 | 6828.38880 | 4220.64580 | 0.69400 | 22.99590 | 21.83380 | HepG2 | SSB | |
TRAM1 | ENSG00000067167.3 | 2591.08430 | 3918.35260 | -0.59670 | 23.25760 | 21.53190 | HepG2 | DNAJC2 | |
TRAM1 | ENSG00000067167.3 | 2767.00000 | 5126.12910 | -0.88950 | 22.52220 | 20.98810 | HepG2 | QKI | |
TRAM1 | ENSG00000067167.3 | 2817.28230 | 4409.92290 | -0.64640 | 22.11510 | 20.51640 | HepG2 | HNRNPU | |
TRAM1 | ENSG00000067167.3 | 2434.27570 | 5463.72340 | -1.16640 | 21.76720 | 20.13310 | HepG2 | MATR3 | |
TRAM1 | ENSG00000067167.3 | 2495.17690 | 4031.52230 | -0.69220 | 19.05450 | 16.56830 | HepG2 | DDX1 | |
TRAM1 | ENSG00000067167.3 | 3002.18520 | 6157.99030 | -1.03640 | 16.88100 | 15.67840 | HepG2 | AKAP1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | TRAM1 | ENSG00000067167.3 | chr8 | - | 71510368 | 71510490 | 71510129 | 71510246 | 71512253 | 71512317 | -0.05100 | 0.00000 | 0.00003 | excluded | K562 | AQR | |||
A3SS | TRAM1 | ENSG00000067167.3 | chr8 | - | 71506740 | 71506853 | 71506740 | 71506825 | 71508497 | 71508556 | 0.12300 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
MXE | TRAM1 | ENSG00000067167.3 | chr8 | - | 71510129 | 71510246 | 71510368 | 71510490 | 71508497 | 71508556 | 71512253 | 71512317 | -0.09900 | 0.00170 | 0.05363 | 2included | HepG2 | SUPV3L1 | |
A3SS | TRAM1 | ENSG00000067167.3 | chr8 | - | 71495884 | 71496097 | 71495884 | 71496057 | 71499129 | 71499234 | -0.79100 | 0.01011 | 0.05339 | shorter | K562 | AQR |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".