TMEM183A

General Information

Gene Name : TMEM183A
Gene ID : ENSG00000163444.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMEM183A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMEM183A	ENSG00000163444.11	43.79	51.28	47.53	ENCSR000AEF
HepG2	TMEM183A	ENSG00000163444.11	39.83	46.20	43.02	ENCSR985KAT
K562	TMEM183A	ENSG00000163444.11	104.34	127.62	115.98	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMEM183A is not avaliable on ENCORE database.

Proteins bound to RNA

TMEM183A RNA is bound by 16 proteins.

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eCLIP assay for TMEM183A is not avaliable on ENCORE database.

16 proteins are bound to TMEM183A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	202981316	202981380	+	intron-Distal	3.90550	12.67660	K562	AGGF1
chr1	202981412	202981467	+	intron-Distal	5.28020	10.25190	K562	HNRNPL
chr1	202988570	202988670	+	intron-Distal	5.02132	9.23289	K562	KHSRP
chr1	202989879	202989948	+	CDS,intron-Proximal	3.81739	8.47924	K562	SF3B4
chr1	202984194	202984222	+	intron-Proximal	3.68827	8.13013	K562	AQR
chr1	202987050	202987104	+	intron-Distal,intron-Proximal	3.96489	7.90583	K562	AQR
chr1	202976528	202976586	+	5'-UTR	4.70201	7.51958	HepG2	DDX3X
chr1	202976734	202976799	+	intron-Proximal	4.26867	7.46483	HepG2	PRPF8
chr1	202981319	202981381	+	intron-Distal	3.13348	7.32408	K562	HNRNPL
chr1	202981467	202981514	+	intron-Distal	4.76781	7.24657	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for TMEM183A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMEM183A is not available on ENCORE database.
77 RBPs can affect the levels of TMEM183A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.

77 RBPs can affect the gene expression of TMEM183A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMEM183A	ENSG00000163444.7	6099.82450	3354.31550	0.86260	28.61290	26.62670	K562	RBM15
TMEM183A	ENSG00000163444.7	5033.36230	3336.08300	0.59330	19.70350	18.30540	K562	AGGF1
TMEM183A	ENSG00000163444.7	6934.07330	3442.51220	1.01010	14.88320	13.66550	K562	PUS1
TMEM183A	ENSG00000163444.7	732.88400	1195.41730	-0.70590	14.08160	13.10470	HepG2	SSB
TMEM183A	ENSG00000163444.7	333.99380	768.21470	-1.20170	13.69130	12.14130	HepG2	DDX55
TMEM183A	ENSG00000163444.7	1911.95750	1097.97260	0.80010	10.22060	9.08530	HepG2	DDX3X
TMEM183A	ENSG00000163444.7	1396.73960	914.80520	0.61040	9.82660	8.87450	HepG2	TAF15
TMEM183A	ENSG00000163444.7	518.17710	805.33210	-0.63610	9.45680	8.38670	HepG2	HNRNPU
TMEM183A	ENSG00000163444.7	1887.42680	922.45060	1.03280	9.53340	8.22570	HepG2	SF3A3
TMEM183A	ENSG00000163444.7	241.82090	482.59920	-0.99690	9.89770	8.07090	HepG2	CSTF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 89 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.

14 RBPs can affect the splicing of TMEM183A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TMEM183A	ENSG00000163444.7	chr1	+	202986883	202987047			202984967	202985268	202987608	202987689	0.09500	0.00000	0.00000	included	K562	WDR43
SE	TMEM183A	ENSG00000163444.7	chr1	+	202986883	202987047			202985087	202985268	202987608	202987689	0.07300	0.00000	0.00000	included	K562	AQR
A3SS	TMEM183A	ENSG00000163444.7	chr1	+	202984016	202984176			202984019	202984176	202977770	202977938	-0.06300	0.00000	0.00005	shorter	K562	HNRNPUL1
A3SS	TMEM183A	ENSG00000163444.7	chr1	+	202985066	202985268			202985087	202985268	202984016	202984176	0.06700	0.00000	0.00000	longer	K562	AQR
MXE	TMEM183A	ENSG00000163444.7	chr1	+	202985066	202985268	202987628	202987689	202984016	202984176	202989920	202990076	0.07700	0.00000	0.00000	1included	K562	AQR
MXE	TMEM183A	ENSG00000163444.7	chr1	+	202985066	202985268	202987608	202987689	202984016	202984176	202989920	202990076	0.06500	0.00000	0.00000	1included	K562	AQR
MXE	TMEM183A	ENSG00000163444.7	chr1	+	202984016	202984176	202985087	202985268	202977770	202977938	202986883	202987047	-0.08700	0.00000	0.00000	2included	K562	AQR
SE	TMEM183A	ENSG00000163444.7	chr1	+	202984016	202984164			202977794	202977938	202985087	202985268	-0.11100	0.00001	0.00052	excluded	K562	SRSF1
SE	TMEM183A	ENSG00000163444.7	chr1	+	202986883	202987047			202984967	202985268	202987608	202987689	0.07500	0.00001	0.00089	included	HepG2	RBM22
SE	TMEM183A	ENSG00000163444.7	chr1	+	202986883	202987047			202985087	202985268	202987608	202987689	0.05300	0.00003	0.00257	included	K562	HNRNPK

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMEM183A

General Information

Functions

Localization

Domains (AlphaFold: TMEM183A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMEM183A is not avaliable on ENCORE database.

16 proteins are bound to TMEM183A RNA:

eCLIP assay for TMEM183A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.

77 RBPs can affect the gene expression of TMEM183A :

The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.

14 RBPs can affect the splicing of TMEM183A :

The Knockdown/knockout RNA-Seq assay for TMEM183A is not avaliable on ENCORE database.