POLR3E

General Information

Gene Name : POLR3E
Gene ID : ENSG00000058600.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: POLR3E)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POLR3E	ENSG00000058600.15	18.93	39.18	29.05	ENCSR000AEF
HepG2	POLR3E	ENSG00000058600.15	210.59	85.65	148.12	ENCSR985KAT
K562	POLR3E	ENSG00000058600.15	92.34	100.39	96.37	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POLR3E is not avaliable on ENCORE database.

Proteins bound to RNA

POLR3E RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for POLR3E is not avaliable on ENCORE database.

45 proteins are bound to POLR3E RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	22328387	22328461	+	3'-UTR,5'-UTR,CDS,intron-Proximal	6.52264	35.12487	K562	SF3B4
chr16	22337032	22337089	+	3'-UTR,CDS,intron-Proximal	3.58574	11.66296	HepG2	SF3A3
chr16	22345758	22345880	+	3'-UTR	3.00605	3.74888	HepG2	CSTF2
chr16	22336537	22336586	+	3'-UTR,CDS	3.10538	3.18660	HepG2	PABPN1
chr16	22335825	22335836	+	3'-UTR,CDS	4.26347	5.18972	HepG2	GRWD1
chr16	22328397	22328441	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.26440	9.46809	HepG2	SF3A3
chr16	22337144	22337185	+	3'-UTR,CDS	3.78580	5.20093	K562	DDX24
chr16	22337281	22337355	+	3'-UTR,CDS	4.04687	18.22249	HepG2	PPIG
chr16	22335675	22335735	+	3'-UTR,CDS,intron-Proximal	3.19475	9.64262	HepG2	BCLAF1
chr16	22336559	22336630	+	3'-UTR,CDS,intron-Proximal	3.14843	12.33522	HepG2	PPIG
chr16	22337020	22337107	+	3'-UTR,CDS,intron-Proximal	4.49542	26.94192	K562	SF3B4
chr16	22334172	22334238	+	3'-UTR,CDS	4.92231	11.94830	K562	DDX24
chr16	22336531	22336595	+	3'-UTR,CDS,intron-Proximal	3.18256	9.07205	HepG2	GRWD1
chr16	22337128	22337270	+	3'-UTR,CDS	3.38284	10.22686	HepG2	GRWD1
chr16	22335901	22335971	+	3'-UTR,CDS	3.07200	6.98206	HepG2	PRPF4
chr16	22336583	22336663	+	3'-UTR,CDS,intron-Proximal	4.84313	36.83603	HepG2	PRPF8
chr16	22345105	22345144	+	3'-UTR	3.00219	4.86633	K562	RBM15
chr16	22325395	22325448	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.21818	9.22286	HepG2	BUD13
chr16	22334187	22334276	+	3'-UTR,CDS,intron-Proximal	4.18435	16.51596	HepG2	PRPF8
chr16	22339903	22339937	+	3'-UTR,CDS,intron-Proximal	3.53979	3.96535	HepG2	AQR
chr16	22337229	22337324	+	3'-UTR,CDS	3.32259	10.30436	HepG2	SRSF1
chr16	22337132	22337191	+	3'-UTR,CDS	4.22160	3.70701	HepG2	PRPF4
chr16	22325355	22325407	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.32468	5.67192	K562	SF3B4
chr16	22326407	22326441	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.69413	5.82303	K562	BUD13
chr16	22334101	22334179	+	3'-UTR,CDS,intron-Proximal	4.57369	7.82456	K562	SF3B4
chr16	22330175	22330256	+	3'-UTR,CDS	4.59459	9.27525	K562	ZNF622
chr16	22328273	22328358	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.37841	22.98318	HepG2	EFTUD2
chr16	22336547	22336586	+	3'-UTR,CDS	4.48624	6.36164	K562	DDX24
chr16	22326459	22326489	+	3'-UTR,5'-UTR,CDS	3.59296	3.29519	HepG2	UCHL5
chr16	22339811	22339875	+	3'-UTR,CDS,intron-Proximal	3.26633	4.38107	K562	AQR
chr16	22326408	22326451	+	3'-UTR,5'-UTR,CDS,intron-Proximal	6.13254	10.14153	K562	DDX24
chr16	22336583	22336626	+	3'-UTR,CDS,intron-Proximal	5.72905	10.68826	HepG2	AQR
chr16	22337324	22337408	+	3'-UTR,CDS	3.29127	5.37770	HepG2	SRSF1
chr16	22328321	22328347	+	3'-UTR,5'-UTR,CDS	3.49920	11.97351	HepG2	PPIG
chr16	22335824	22335882	+	3'-UTR,CDS	3.37925	8.43531	K562	ZNF622
chr16	22337086	22337179	+	3'-UTR,CDS	3.60476	4.83478	K562	PUM1
chr16	22337138	22337234	+	3'-UTR,CDS	3.57682	5.17702	K562	SRSF1
chr16	22328332	22328420	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.77745	13.26607	HepG2	PRPF8
chr16	22325431	22325451	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.64292	6.93329	K562	DDX24
chr16	22326451	22326531	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.72636	12.19740	K562	DDX24
chr16	22337559	22337625	+	3'-UTR,CDS,intron-Proximal	3.82022	11.69715	HepG2	PRPF8
chr16	22345186	22345267	+	3'-UTR	4.07335	3.73926	K562	RBM15
chr16	22337024	22337140	+	3'-UTR,CDS,intron-Proximal	3.67925	11.36875	K562	BUD13
chr16	22319466	22319547	+	3'-UTR,CDS,intron-Proximal	4.66547	21.98661	K562	DDX24
chr16	22330146	22330266	+	3'-UTR,CDS,intron-Proximal	4.33299	15.78065	K562	DDX24
chr16	22335674	22335734	+	3'-UTR,CDS,intron-Proximal	3.20855	8.05533	K562	DDX24
chr16	22328370	22328444	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.17729	31.83496	HepG2	SF3B4
chr16	22335825	22335873	+	3'-UTR,CDS	3.93708	4.06874	HepG2	UCHL5
chr16	22335809	22335859	+	3'-UTR,CDS,intron-Proximal	3.55846	13.91201	HepG2	EFTUD2
chr16	22337280	22337349	+	3'-UTR,CDS	3.71470	4.76009	HepG2	PRPF4
chr16	22336584	22336641	+	3'-UTR,CDS,intron-Proximal	4.15659	5.99968	K562	PRPF8
chr16	22328002	22328016	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.89684	18.81299	HepG2	PRPF8
chr16	22336563	22336645	+	3'-UTR,CDS,intron-Proximal	3.09817	14.25439	HepG2	BUD13
chr16	22334169	22334250	+	3'-UTR,CDS,intron-Proximal	3.80491	24.45362	HepG2	PPIG
chr16	22327921	22327935	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.46896	5.93845	K562	DDX24
chr16	22320749	22320788	+	3'-UTR,CDS	4.22848	6.28735	K562	DDX24
chr16	22328526	22328544	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.50756	7.79098	HepG2	PRPF8
chr16	22336582	22336648	+	3'-UTR,CDS,intron-Proximal	4.01255	31.65492	HepG2	EFTUD2
chr16	22328308	22328325	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.73209	4.24111	K562	EFTUD2
chr16	22337365	22337402	+	3'-UTR,CDS	3.38133	4.48818	HepG2	GRWD1
chr16	22326456	22326514	+	3'-UTR,5'-UTR,CDS	3.27677	17.83192	HepG2	PPIG
chr16	22327921	22327964	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.20518	10.90751	HepG2	PPIG
chr16	22335673	22335734	+	3'-UTR,CDS,intron-Proximal	4.01146	20.35447	HepG2	PPIG
chr16	22337437	22337490	+	3'-UTR,CDS	4.57116	4.15208	K562	RBM15
chr16	22330179	22330248	+	3'-UTR,CDS	3.34314	4.89070	K562	UCHL5
chr16	22325424	22325473	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.28857	22.74734	HepG2	PRPF8
chr16	22337150	22337208	+	3'-UTR,CDS	3.27432	6.18983	HepG2	RBM15
chr16	22339871	22339908	+	3'-UTR,CDS	3.09764	3.90804	HepG2	GRWD1
chr16	22335980	22335990	+	3'-UTR,CDS,intron-Proximal	3.52756	7.85990	HepG2	PRPF8
chr16	22320187	22320256	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78679	6.57821	HepG2	AQR
chr16	22328006	22328041	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.37015	10.30697	K562	AQR
chr16	22334250	22334300	+	3'-UTR,CDS,intron-Proximal	3.84715	3.39008	HepG2	AQR
chr16	22337084	22337121	+	3'-UTR,CDS	3.94677	5.20093	K562	DDX24
chr16	22337017	22337100	+	3'-UTR,CDS,intron-Proximal	4.12141	11.56965	HepG2	AQR
chr16	22330151	22330187	+	3'-UTR,CDS	3.08868	3.26275	K562	BUD13
chr16	22328245	22328348	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.20562	9.29543	K562	AQR
chr16	22337490	22337546	+	3'-UTR,CDS	4.79386	4.82934	K562	RBM15
chr16	22326489	22326532	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.94438	4.43797	HepG2	UCHL5
chr16	22320313	22320404	+	3'-UTR,CDS,intron-Proximal	3.87908	20.01130	HepG2	PRPF8
chr16	22337133	22337249	+	3'-UTR,CDS	3.14107	5.59151	HepG2	SRSF9
chr16	22339792	22339876	+	3'-UTR,CDS,intron-Proximal	4.68465	21.15984	HepG2	EFTUD2
chr16	22335875	22335966	+	3'-UTR,CDS	4.55554	23.91264	K562	DDX24
chr16	22320276	22320349	+	3'-UTR,CDS,intron-Proximal	3.37566	4.76009	HepG2	PRPF4
chr16	22337284	22337357	+	3'-UTR,CDS	3.82140	7.45042	K562	UCHL5
chr16	22337028	22337103	+	3'-UTR,CDS,intron-Proximal	4.47950	20.52365	K562	AQR
chr16	22337234	22337333	+	3'-UTR,CDS	4.88163	7.76645	K562	SRSF1
chr16	22326514	22326531	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.74710	11.66833	HepG2	PPIG
chr16	22328004	22328026	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.81606	5.99700	HepG2	AQR
chr16	22335873	22335965	+	3'-UTR,CDS	4.97544	10.34309	HepG2	UCHL5
chr16	22335886	22335976	+	3'-UTR,CDS	4.37837	29.21209	HepG2	PPIG
chr16	22326510	22326574	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.51982	28.74596	HepG2	PRPF8
chr16	22343405	22343468	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30047	8.48025	HepG2	U2AF2
chr16	22337258	22337412	+	3'-UTR,CDS	3.19354	6.15187	K562	ZNF800
chr16	22328317	22328361	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.12201	8.66757	K562	DDX24
chr16	22337279	22337365	+	3'-UTR,CDS	3.16563	8.01908	HepG2	GRWD1
chr16	22337078	22337122	+	3'-UTR,CDS,intron-Proximal	3.09548	10.96565	HepG2	PPIG
chr16	22320244	22320280	+	3'-UTR,CDS,intron-Proximal	5.36574	11.60475	K562	DDX24
chr16	22339773	22339838	+	3'-UTR,CDS,intron-Proximal	4.08374	6.26407	K562	SF3B4
chr16	22344961	22345023	+	3'-UTR,CDS,intron-Proximal	3.15202	3.17639	HepG2	LSM11
chr16	22345095	22345105	+	3'-UTR	3.61269	4.22460	K562	RBM15
chr16	22337208	22337254	+	3'-UTR,CDS	4.68831	5.50697	K562	UCHL5
chr16	22337135	22337269	+	3'-UTR,CDS	3.08762	21.17239	HepG2	PPIG
chr16	22328514	22328526	+	3'-UTR,5'-UTR,CDS	5.07828	4.17466	K562	DDX24
chr16	22335822	22335840	+	3'-UTR,CDS,intron-Proximal	3.71132	11.11819	HepG2	PPIG
chr16	22328434	22328459	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.58161	6.28735	K562	DDX24
chr16	22339822	22339874	+	3'-UTR,CDS,intron-Proximal	4.84420	18.91284	HepG2	AQR
chr16	22328396	22328509	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.41559	8.30660	K562	BUD13
chr16	22345523	22345558	+	3'-UTR	3.14408	3.04831	K562	RBM15
chr16	22337303	22337402	+	3'-UTR,CDS	3.15557	9.90630	HepG2	BCLAF1
chr16	22336586	22336592	+	3'-UTR,CDS,intron-Proximal	5.23721	19.12979	K562	AQR
chr16	22335600	22335699	+	3'-UTR,CDS,intron-Proximal	5.75381	9.44792	K562	SF3B4
chr16	22320280	22320358	+	3'-UTR,CDS,intron-Proximal	4.20225	13.82711	K562	DDX24
chr16	22328459	22328506	+	3'-UTR,5'-UTR,CDS	4.00228	9.86697	K562	DDX24
chr16	22337052	22337114	+	3'-UTR,CDS,intron-Proximal	4.16974	25.87260	HepG2	SF3B4
chr16	22328331	22328360	+	3'-UTR,5'-UTR,CDS	3.26431	3.43213	K562	UCHL5
chr16	22345259	22345329	+	3'-UTR	3.64535	4.96777	HepG2	ZC3H11A
chr16	22335892	22335980	+	3'-UTR,CDS	3.26793	13.92075	HepG2	GRWD1
chr16	22325342	22325428	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.15636	13.42847	HepG2	EFTUD2
chr16	22320244	22320280	+	3'-UTR,CDS,intron-Proximal	3.14504	13.53623	HepG2	PPIG
chr16	22344930	22344997	+	3'-UTR,CDS,intron-Proximal	5.24915	6.40247	K562	SF3B4
chr16	22325445	22325493	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.40475	12.70303	K562	AQR
chr16	22325381	22325422	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.39234	5.81258	K562	AQR
chr16	22337453	22337496	+	3'-UTR,CDS	3.52476	3.57153	HepG2	RBM15
chr16	22337016	22337121	+	3'-UTR,CDS,intron-Proximal	3.47288	21.50220	HepG2	BUD13
chr16	22337023	22337120	+	3'-UTR,CDS,intron-Proximal	4.19729	32.87864	HepG2	EFTUD2
chr16	22319471	22319545	+	3'-UTR,CDS,intron-Proximal	3.32303	8.03770	HepG2	GRWD1
chr16	22335823	22335875	+	3'-UTR,CDS,intron-Proximal	3.71893	9.86075	K562	DDX24
chr16	22320827	22320845	+	5'-UTR,CDS,intron-Proximal	3.38999	8.04398	K562	AQR
chr16	22308758	22308818	+	5'-UTR	3.04250	10.19648	HepG2	DDX3X
chr16	22325047	22325056	+	5'-UTR,CDS,intron-Proximal	4.08682	7.84250	HepG2	AQR
chr16	22308799	22308857	+	5'-UTR	3.20210	4.07771	K562	ZNF622
chr16	22320788	22320833	+	5'-UTR,CDS,intron-Proximal	4.47657	10.65187	K562	DDX24
chr16	22316496	22316517	+	5'-UTR,CDS,intron-Distal	3.65077	4.42776	HepG2	BUD13
chr16	22314207	22314283	+	5'-UTR,intron-Distal,intron-Proximal	3.36241	7.47024	HepG2	AQR
chr16	22308818	22308859	+	5'-UTR,intron-Proximal	3.81279	3.42371	HepG2	DDX3X
chr16	22314272	22314309	+	5'-UTR,CDS,intron-Distal	3.45008	4.48818	HepG2	GRWD1
chr16	22316476	22316507	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.39132	13.60405	HepG2	PPIG
chr16	22324940	22324955	+	5'-UTR,CDS,intron-Proximal	5.82421	8.32974	K562	DDX24
chr16	22308738	22308823	+	5'-UTR	3.46623	7.22071	HepG2	NCBP2
chr16	22324955	22325007	+	5'-UTR,CDS,intron-Proximal	4.71634	15.20984	K562	DDX24
chr16	22308856	22308900	+	5'-UTR,intron-Proximal	3.12364	7.13280	HepG2	PRPF8
chr16	22314222	22314288	+	5'-UTR,intron-Distal,intron-Proximal	3.71108	8.84055	HepG2	BUD13
chr16	22316476	22316529	+	5'-UTR,CDS,intron-Distal,intron-Proximal	5.15428	15.45094	K562	DDX24
chr16	22316505	22316534	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.58983	6.81564	HepG2	PRPF8
chr16	22316476	22316522	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.14755	4.50387	HepG2	AQR
chr16	22325035	22325094	+	5'-UTR,CDS,intron-Proximal	3.55261	13.79463	HepG2	PRPF8
chr16	22308748	22308799	+	5'-UTR	3.82742	7.71102	K562	ZNF622
chr16	22316475	22316519	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.05940	4.56061	K562	BUD13
chr16	22325047	22325065	+	5'-UTR,CDS,intron-Proximal	3.93659	7.53394	K562	AQR
chr16	22308741	22308854	+	5'-UTR	4.54282	12.01551	HepG2	SDAD1
chr16	22308740	22308801	+	5'-UTR	4.68697	10.89272	HepG2	ZNF800
chr16	22320823	22320871	+	5'-UTR,CDS,intron-Proximal	5.74933	25.03659	HepG2	PRPF8
chr16	22314246	22314286	+	5'-UTR,intron-Distal,intron-Proximal	4.59391	5.35746	HepG2	DDX3X
chr16	22314294	22314325	+	CDS,intron-Distal	4.62201	5.79396	K562	DDX24
chr16	22314300	22314325	+	CDS,intron-Distal	3.65336	7.10944	HepG2	PPIG
chr16	22314322	22314356	+	CDS,intron-Distal,intron-Proximal	4.45624	4.62947	HepG2	AQR
chr16	22336717	22336772	+	intron-Distal	3.18376	3.21151	HepG2	U2AF2
chr16	22339235	22339295	+	intron-Distal	3.46623	6.59715	HepG2	HNRNPK
chr16	22337696	22337727	+	intron-Distal,intron-Proximal	5.91981	12.37853	HepG2	EFTUD2
chr16	22338296	22338339	+	intron-Distal	3.29924	7.39418	HepG2	EFTUD2
chr16	22328185	22328303	+	intron-Distal,intron-Proximal	3.04953	7.89029	HepG2	PRPF4
chr16	22336698	22336736	+	intron-Distal	3.67472	3.91320	HepG2	RBM15
chr16	22333967	22334027	+	intron-Distal	3.36925	4.38394	K562	DROSHA
chr16	22334817	22334881	+	intron-Distal	3.26257	4.09699	HepG2	HNRNPK
chr16	22333960	22334038	+	intron-Distal	3.76040	5.55601	HepG2	GTF2F1
chr16	22338571	22338619	+	intron-Distal	5.42013	39.25235	HepG2	XPO5
chr16	22309013	22309051	+	intron-Distal	4.03354	6.20417	HepG2	BUD13
chr16	22337638	22337719	+	intron-Distal,intron-Proximal	3.56746	10.72166	HepG2	CDC40
chr16	22324872	22324925	+	intron-Distal,intron-Proximal	5.45624	9.96618	HepG2	AQR
chr16	22337632	22337706	+	intron-Distal,intron-Proximal	3.99315	6.19396	K562	AKAP8L
chr16	22328200	22328233	+	intron-Distal,intron-Proximal	4.57567	24.29860	HepG2	SF3B4
chr16	22332714	22332760	+	intron-Distal	4.66961	6.19745	HepG2	HNRNPM
chr16	22311199	22311250	+	intron-Distal	4.00426	3.64484	HepG2	HNRNPC
chr16	22338966	22339026	+	intron-Distal	5.33596	29.28831	HepG2	XPO5
chr16	22338343	22338369	+	intron-Distal	3.35586	9.47595	HepG2	XPO5
chr16	22319410	22319431	+	intron-Distal,intron-Proximal	4.32624	3.95187	HepG2	AQR
chr16	22319395	22319444	+	intron-Distal,intron-Proximal	3.87098	9.88830	HepG2	SF3B4
chr16	22331758	22331771	+	intron-Distal	3.54254	4.19942	HepG2	HNRNPC
chr16	22338103	22338164	+	intron-Distal	3.43051	13.58917	HepG2	XPO5
chr16	22319728	22319843	+	intron-Distal	4.32328	4.43116	HepG2	RBFOX2
chr16	22334725	22334787	+	intron-Distal	4.28140	8.35676	HepG2	HNRNPK
chr16	22337635	22337724	+	intron-Distal,intron-Proximal	4.72073	13.13696	K562	EFTUD2
chr16	22340296	22340396	+	intron-Distal	3.37983	3.11609	HepG2	ILF3
chr16	22337642	22337738	+	intron-Distal,intron-Proximal	3.51136	6.95673	HepG2	GTF2F1
chr16	22333943	22333989	+	intron-Distal	3.82225	7.11537	HepG2	PRPF4
chr16	22326749	22326786	+	intron-Distal	4.58036	5.29549	HepG2	EFTUD2
chr16	22314562	22314640	+	intron-Distal	3.93999	3.41442	HepG2	HNRNPK
chr16	22335365	22335423	+	intron-Distal	5.15178	6.59160	HepG2	DGCR8
chr16	22332159	22332267	+	intron-Distal	3.78764	7.58130	HepG2	HNRNPM
chr16	22337630	22337714	+	intron-Distal,intron-Proximal	3.63054	9.07913	K562	BUD13
chr16	22313514	22313595	+	intron-Distal	3.70483	3.06084	HepG2	HNRNPK
chr16	22336109	22336164	+	intron-Distal	4.34562	9.29215	HepG2	EFTUD2
chr16	22338557	22338571	+	intron-Distal	7.74568	65.55027	HepG2	XPO5
chr16	22324771	22324882	+	intron-Distal,intron-Proximal	4.51992	4.57154	HepG2	FAM120A
chr16	22341659	22341708	+	intron-Distal	4.20557	7.01244	HepG2	ILF3
chr16	22336689	22336753	+	intron-Distal	3.73954	19.14489	HepG2	EFTUD2
chr16	22333989	22334052	+	intron-Distal	3.65807	8.33704	HepG2	PRPF4
chr16	22328196	22328265	+	intron-Distal,intron-Proximal	4.16174	10.60725	HepG2	SF3A3
chr16	22336954	22337020	+	intron-Distal,intron-Proximal	3.19483	6.16954	HepG2	SF3B4
chr16	22328096	22328157	+	intron-Distal,intron-Proximal	5.05377	17.46213	HepG2	RBFOX2
chr16	22314352	22314372	+	intron-Distal,intron-Proximal	3.86499	4.45914	HepG2	PRPF8
chr16	22324523	22324590	+	intron-Distal	3.50718	4.76009	HepG2	PRPF4
chr16	22338307	22338374	+	intron-Distal	4.03019	3.07008	K562	NONO
chr16	22328029	22328143	+	intron-Distal,intron-Proximal	5.33373	20.76108	HepG2	EFTUD2
chr16	22314153	22314207	+	intron-Distal,intron-Proximal	3.33760	3.60559	HepG2	AQR
chr16	22337646	22337707	+	intron-Distal,intron-Proximal	3.83471	3.33043	HepG2	NCBP2
chr16	22338485	22338522	+	intron-Distal	4.94931	47.47579	HepG2	XPO5
chr16	22338619	22338673	+	intron-Distal	4.45246	31.26467	HepG2	XPO5
chr16	22337641	22337703	+	intron-Distal,intron-Proximal	3.66035	4.13833	K562	GTF2F1
chr16	22337632	22337734	+	intron-Distal,intron-Proximal	3.31649	4.45054	HepG2	PCBP2
chr16	22325100	22325164	+	intron-Distal,intron-Proximal	4.53082	3.89565	K562	PRPF8
chr16	22328191	22328273	+	intron-Distal,intron-Proximal	4.71659	27.82232	HepG2	EFTUD2
chr16	22337639	22337711	+	intron-Distal,intron-Proximal	3.29773	17.17151	HepG2	BUD13
chr16	22324783	22324866	+	intron-Distal,intron-Proximal	4.63750	5.59467	HepG2	PRPF4
chr16	22328056	22328133	+	intron-Distal,intron-Proximal	3.31458	3.91530	HepG2	PRPF4
chr16	22335458	22335551	+	intron-Distal	4.62506	5.63630	HepG2	DROSHA
chr16	22338290	22338343	+	intron-Distal	4.02490	14.33444	HepG2	XPO5
chr16	22314556	22314649	+	intron-Distal	5.11210	8.19722	HepG2	PCBP2
chr16	22336938	22337023	+	intron-Distal,intron-Proximal	3.46931	22.08327	HepG2	EFTUD2
chr16	22333960	22334013	+	intron-Distal	3.57446	4.76523	HepG2	SF3B4
chr16	22337634	22337712	+	intron-Distal,intron-Proximal	4.29646	15.85890	HepG2	PRPF4
chr16	22338522	22338557	+	intron-Distal	6.72896	400.00000	HepG2	XPO5
chr16	22316562	22316596	+	intron-Distal,intron-Proximal	3.66750	6.95612	HepG2	PRPF8
chr16	22337640	22337705	+	intron-Distal,intron-Proximal	5.08994	5.13952	K562	SF3B4
chr16	22328113	22328158	+	intron-Distal	3.42607	5.55128	HepG2	SF3B4
chr16	22336902	22336957	+	intron-Distal	3.49617	7.69474	HepG2	RBFOX2
chr16	22336731	22336774	+	intron-Distal	3.22532	3.76326	HepG2	RBFOX2
chr16	22338758	22338809	+	intron-Distal	3.25318	4.14686	HepG2	FKBP4
chr16	22337640	22337696	+	intron-Proximal	6.09244	62.50299	HepG2	EFTUD2
chr16	22328026	22328050	+	intron-Proximal	4.47805	7.26476	HepG2	AQR
chr16	22325473	22325500	+	intron-Proximal	5.48599	5.68078	HepG2	AQR
chr16	22337608	22337638	+	intron-Proximal	3.92935	4.00320	K562	AQR
chr16	22325456	22325489	+	intron-Proximal	4.56076	6.88230	HepG2	BUD13
chr16	22326541	22326612	+	intron-Proximal	5.23811	17.29805	HepG2	EFTUD2
chr16	22320893	22320924	+	intron-Proximal	5.52485	6.68817	HepG2	EFTUD2
chr16	22336986	22337075	+	intron-Proximal	3.25624	3.59099	K562	SMNDC1
chr16	22337602	22337678	+	intron-Proximal	4.23595	5.56912	HepG2	AQR
chr16	22326574	22326602	+	intron-Proximal	3.32156	5.13777	HepG2	PRPF8
chr16	22339919	22339989	+	intron-Proximal	3.94194	10.54702	HepG2	EFTUD2
chr16	22335766	22335804	+	intron-Proximal	5.54471	10.05439	HepG2	SF3B4
chr16	22325065	22325089	+	intron-Proximal	5.54007	9.41643	K562	AQR
chr16	22328034	22328094	+	intron-Proximal	3.74371	6.34623	HepG2	RBM22
chr16	22334274	22334343	+	intron-Proximal	5.13796	16.97177	HepG2	EFTUD2
chr16	22328544	22328567	+	intron-Proximal	4.18256	9.68077	HepG2	PRPF8
chr16	22339919	22339996	+	intron-Proximal	3.40012	5.99889	HepG2	TIAL1
chr16	22339808	22339822	+	intron-Proximal	5.67785	10.32702	HepG2	AQR
chr16	22328016	22328039	+	intron-Proximal	3.97246	20.40896	HepG2	PRPF8
chr16	22328220	22328313	+	intron-Proximal	5.37064	32.54456	K562	SF3B4
chr16	22320877	22320926	+	intron-Proximal	3.80045	6.79537	K562	AQR
chr16	22328056	22328102	+	intron-Proximal	3.35015	4.72062	HepG2	PRPF8
chr16	22325056	22325085	+	intron-Proximal	5.76499	11.04988	HepG2	AQR
chr16	22334121	22334152	+	intron-Proximal	5.09491	10.47516	HepG2	EFTUD2
chr16	22328039	22328056	+	intron-Proximal	3.47947	12.21824	HepG2	PRPF8
chr16	22337643	22337699	+	intron-Proximal	4.19632	3.81265	K562	MTPAP
chr16	22337031	22337052	+	intron-Proximal	5.08411	26.93149	HepG2	SF3B4
chr16	22325488	22325512	+	intron-Proximal	5.23811	5.24235	HepG2	EFTUD2
chr16	22335604	22335662	+	intron-Proximal	5.77863	9.50015	HepG2	SF3B4
chr16	22320670	22320734	+	intron-Proximal	4.12122	12.32366	HepG2	SF3B4
chr16	22336592	22336643	+	intron-Proximal	4.28101	7.66928	K562	BUD13
chr16	22328233	22328307	+	intron-Proximal	4.78737	36.11402	HepG2	SF3B4
chr16	22325473	22325506	+	intron-Proximal	5.00695	17.79328	HepG2	PRPF8
chr16	22337638	22337692	+	intron-Proximal	3.62550	12.77531	K562	AQR
chr16	22308858	22308913	+	intron-Proximal	4.89278	5.68078	HepG2	AQR
chr16	22328007	22328059	+	intron-Proximal	3.62714	3.88924	K562	PRPF8
chr16	22334096	22334166	+	intron-Proximal	3.08171	6.24257	HepG2	SF3B4
chr16	22337652	22337692	+	intron-Proximal	3.89700	5.20093	K562	DDX24
chr16	22328041	22328063	+	intron-Proximal	4.05675	10.08968	K562	AQR
chr16	22335990	22336022	+	intron-Proximal	3.67724	9.09021	HepG2	PRPF8
chr16	22308868	22308912	+	intron-Proximal	3.84233	4.52312	K562	AQR
chr16	22328280	22328315	+	intron-Proximal	6.06177	21.11883	HepG2	SF3A3
chr16	22319546	22319585	+	intron-Proximal	3.78003	6.65114	HepG2	PRPF8
chr16	22328265	22328280	+	intron-Proximal	5.74434	13.54742	HepG2	SF3A3
chr16	22325454	22325473	+	intron-Proximal	5.32091	4.62947	HepG2	AQR
chr16	22334276	22334347	+	intron-Proximal	3.85212	11.94608	HepG2	PRPF8
chr16	22336592	22336652	+	intron-Proximal	5.34579	26.58915	K562	AQR
chr16	22327863	22327915	+	intron-Proximal	3.96906	6.37709	K562	EFTUD2
chr16	22334093	22334171	+	intron-Proximal	3.68319	10.47466	HepG2	PRPF4
chr16	22320845	22320877	+	intron-Proximal	4.57885	12.86643	K562	AQR
chr16	22327847	22327913	+	intron-Proximal	4.96050	13.00415	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for POLR3E is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POLR3E is not available on ENCORE database.
70 RBPs can affect the levels of POLR3E.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.

70 RBPs can affect the gene expression of POLR3E :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POLR3E	ENSG00000058600.11	1650.09590	2292.84250	-0.47460	7.39710	6.50070	HepG2	ACO1
POLR3E	ENSG00000058600.11	1819.77710	2575.06260	-0.50080	4.14610	3.51280	HepG2	AKAP1
POLR3E	ENSG00000058600.11	3004.96520	3686.60350	-0.29490	3.73810	2.96210	HepG2	AUH
POLR3E	ENSG00000058600.11	1452.37250	1952.92180	-0.42720	4.62860	3.05090	HepG2	BUD13
POLR3E	ENSG00000058600.11	1126.06770	1519.72020	-0.43250	4.96850	3.97160	HepG2	CALR
POLR3E	ENSG00000058600.11	1640.64150	2188.16910	-0.41550	6.55970	5.65000	HepG2	CELF1
POLR3E	ENSG00000058600.11	2627.33360	2352.78090	0.15910	1.95970	1.31970	HepG2	DAZAP1
POLR3E	ENSG00000058600.11	1028.08400	1478.74490	-0.52440	5.79260	4.85090	HepG2	DDX21
POLR3E	ENSG00000058600.11	1020.62920	1563.59860	-0.61540	5.59020	4.53620	HepG2	DDX55
POLR3E	ENSG00000058600.11	1629.76460	2193.62820	-0.42870	7.67570	6.65530	HepG2	DKC1
POLR3E	ENSG00000058600.11	1223.21600	1679.19760	-0.45710	4.03940	2.94760	HepG2	EEF2
POLR3E	ENSG00000058600.11	2300.14950	1694.27220	0.44100	5.04430	3.99480	HepG2	FUBP3
POLR3E	ENSG00000058600.11	1219.83640	1512.48940	-0.31020	1.86660	1.33380	HepG2	GPKOW
POLR3E	ENSG00000058600.11	2352.84960	1958.83260	0.26430	3.12910	2.37020	HepG2	HNRNPF
POLR3E	ENSG00000058600.11	3824.91010	2134.19220	0.84160	15.44210	13.93030	HepG2	HNRNPK
POLR3E	ENSG00000058600.11	2288.09100	1928.87830	0.24630	2.03010	1.40360	HepG2	IGF2BP1
POLR3E	ENSG00000058600.11	2473.09920	2156.27610	0.19770	2.23330	1.67740	HepG2	PCBP1
POLR3E	ENSG00000058600.11	1684.26070	1424.33580	0.24170	2.30390	1.62440	HepG2	PPIL4
POLR3E	ENSG00000058600.11	907.78450	1206.06810	-0.40990	2.97040	2.13540	HepG2	PRPF8
POLR3E	ENSG00000058600.11	1697.06910	2194.11670	-0.37060	5.99300	5.25040	HepG2	PTBP1
POLR3E	ENSG00000058600.11	1462.31880	2335.40840	-0.67540	20.42490	19.02840	HepG2	PUS1
POLR3E	ENSG00000058600.11	3055.56330	2376.22910	0.36270	5.01690	4.21330	HepG2	QKI
POLR3E	ENSG00000058600.11	2719.54070	3537.93380	-0.37950	6.56850	5.85150	HepG2	RBM22
POLR3E	ENSG00000058600.11	1937.10120	2441.82030	-0.33410	5.07370	4.37750	HepG2	NELFE
POLR3E	ENSG00000058600.11	2531.92990	2110.33090	0.26270	1.90070	1.32240	HepG2	RPLP0
POLR3E	ENSG00000058600.11	1107.32540	1326.39490	-0.26040	1.91550	1.39550	HepG2	RPS19
POLR3E	ENSG00000058600.11	1860.83150	2500.45680	-0.42620	2.66960	1.88350	HepG2	RPS3A
POLR3E	ENSG00000058600.11	2111.64240	1422.14180	0.57020	14.67060	13.36320	HepG2	SAFB2
POLR3E	ENSG00000058600.11	2033.17920	1428.63410	0.50900	5.70120	4.71820	HepG2	SF3B1
POLR3E	ENSG00000058600.11	2869.42400	2284.31370	0.32890	5.41710	4.63650	HepG2	SF3B4
POLR3E	ENSG00000058600.11	2573.58390	2135.44500	0.26910	4.61470	3.74470	HepG2	SLBP
POLR3E	ENSG00000058600.11	1412.38360	1658.46510	-0.23170	2.89890	2.24230	HepG2	SMN1
POLR3E	ENSG00000058600.11	3244.72460	3995.86730	-0.30040	4.51310	3.91790	HepG2	SRFBP1
POLR3E	ENSG00000058600.11	1835.67620	2384.34730	-0.37730	6.58880	5.93440	HepG2	SRSF1
POLR3E	ENSG00000058600.11	1722.90070	2198.92900	-0.35200	5.35850	4.52910	HepG2	SRSF5
POLR3E	ENSG00000058600.11	2439.88330	1924.53180	0.34220	5.05600	4.15970	HepG2	SRSF7
POLR3E	ENSG00000058600.11	2190.81230	3469.18650	-0.66310	17.68620	16.62670	HepG2	SSB
POLR3E	ENSG00000058600.11	1132.91110	1556.50300	-0.45830	3.43090	2.68730	HepG2	SUPV3L1
POLR3E	ENSG00000058600.11	2322.55580	1969.25040	0.23800	2.07320	1.34680	HepG2	TIA1
POLR3E	ENSG00000058600.11	1910.80300	1565.58580	0.28740	3.79270	3.15480	HepG2	TRIM56
POLR3E	ENSG00000058600.11	1789.37000	919.45000	0.96050	14.56860	12.86160	HepG2	UCHL5
POLR3E	ENSG00000058600.11	1854.57320	2310.75120	-0.31730	5.11060	4.20710	HepG2	UPF1
POLR3E	ENSG00000058600.11	3392.82130	2230.93770	0.60470	14.94030	13.71580	HepG2	UTP3
POLR3E	ENSG00000058600.11	1177.46680	1918.85530	-0.70460	20.86980	19.34030	HepG2	ZC3H8
POLR3E	ENSG00000058600.11	2125.91920	2541.38240	-0.25750	4.44670	3.79590	HepG2	ZNF622
POLR3E	ENSG00000058600.11	1966.78100	1471.12230	0.41880	2.55950	1.31730	HepG2	ZRANB2
POLR3E	ENSG00000058600.11	2143.03700	2767.60030	-0.36900	4.52050	3.82730	K562	AGGF1
POLR3E	ENSG00000058600.11	2420.37630	3041.12830	-0.32940	3.05260	2.00660	K562	AKAP8
POLR3E	ENSG00000058600.11	2501.55780	3357.42080	-0.42450	4.71780	3.98870	K562	AQR
POLR3E	ENSG00000058600.11	2606.19460	3021.58430	-0.21340	2.14700	1.34910	K562	ATP5C1
POLR3E	ENSG00000058600.11	963.33580	1290.62720	-0.42200	3.39030	2.42410	K562	BOP1
POLR3E	ENSG00000058600.11	2463.14200	3307.47100	-0.42520	6.05830	4.28440	K562	CCDC124
POLR3E	ENSG00000058600.11	1360.23270	1118.90550	0.28170	2.42970	1.68210	K562	EIF3G
POLR3E	ENSG00000058600.11	1726.96380	1437.61200	0.26450	2.50370	1.42470	K562	EIF4B
POLR3E	ENSG00000058600.11	1047.43620	1396.35440	-0.41480	3.48620	2.52270	K562	FMR1
POLR3E	ENSG00000058600.11	875.35490	1183.59540	-0.43520	3.26130	2.26130	K562	FTO
POLR3E	ENSG00000058600.11	2099.01330	1660.21200	0.33820	4.35550	3.62030	K562	FXR1
POLR3E	ENSG00000058600.11	1419.07510	1699.71220	-0.26030	2.07040	1.54360	K562	HNRNPC
POLR3E	ENSG00000058600.11	2337.40830	3056.22960	-0.38680	4.51850	3.42470	K562	KIF1C
POLR3E	ENSG00000058600.11	2378.86020	2925.53160	-0.29840	2.66940	1.61730	K562	MAK16
POLR3E	ENSG00000058600.11	2791.66450	3423.74360	-0.29440	2.58860	1.71430	K562	MBNL1
POLR3E	ENSG00000058600.11	1298.92170	1594.22410	-0.29550	2.76770	1.53810	K562	NCBP2
POLR3E	ENSG00000058600.11	1847.96570	1357.40170	0.44500	2.67360	1.71100	K562	PCBP2
POLR3E	ENSG00000058600.11	1817.23580	2387.24320	-0.39360	3.08730	2.20730	K562	PCBP3
POLR3E	ENSG00000058600.11	1454.96530	1831.14510	-0.33180	3.48790	2.58180	K562	POLR2G
POLR3E	ENSG00000058600.11	3811.38590	4744.84150	-0.31600	3.84280	2.56410	K562	PUM1
POLR3E	ENSG00000058600.11	3630.35330	4649.01670	-0.35680	6.02330	4.58850	K562	PUM2
POLR3E	ENSG00000058600.11	1895.37920	2856.05490	-0.59150	7.58810	6.73460	K562	PUS1
POLR3E	ENSG00000058600.11	2001.61880	2782.72780	-0.47530	8.02140	7.04290	K562	RBM15
POLR3E	ENSG00000058600.11	1259.28160	1634.56260	-0.37630	2.76930	1.95280	K562	RPS19
POLR3E	ENSG00000058600.11	1474.05480	1111.62150	0.40700	4.71430	3.58710	K562	SF3B4
POLR3E	ENSG00000058600.11	1810.78850	1418.74600	0.35190	2.49850	1.72630	K562	TIA1
POLR3E	ENSG00000058600.11	2676.29070	3256.68000	-0.28320	4.28580	2.70280	K562	TROVE2
POLR3E	ENSG00000058600.11	1313.80480	1070.14980	0.29580	2.61520	1.83390	K562	U2AF2
POLR3E	ENSG00000058600.11	2236.86720	2783.48560	-0.31540	5.21490	4.26250	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.

5 RBPs can affect the splicing of POLR3E :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	POLR3E	ENSG00000058600.11	chr16	+	22339830	22339908	22337081	22337599	22344964	22345346	-0.24300	0.00223	0.05777	excluded	K562	AKAP8L
SE	POLR3E	ENSG00000058600.11	chr16	+	22337991	22338049	22337081	22337599	22339830	22339908	0.09700	0.00020	0.00317	included	K562	AQR
SE	POLR3E	ENSG00000058600.11	chr16	+	22336739	22336969	22336525	22336587	22337081	22337599	0.06600	0.00045	0.00879	included	K562	PUS1
SE	POLR3E	ENSG00000058600.11	chr16	+	22343380	22343506	22337081	22337599	22344964	22345017	-0.05400	0.00027	0.00571	excluded	K562	PUS1
SE	POLR3E	ENSG00000058600.11	chr16	+	22337991	22338022	22337081	22337599	22339830	22339908	0.08200	0.00034	0.01859	included	HepG2	MATR3
SE	POLR3E	ENSG00000058600.11	chr16	+	22339830	22339908	22337081	22337599	22344964	22345346	-0.28500	0.00163	0.03959	excluded	K562	RBM15
A3SS	POLR3E	ENSG00000058600.11	chr16	+	22314231	22314325	22314251	22314325	22308731	22308858	0.12400	0.00013	0.00112	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POLR3E

General Information

Functions

Localization

Domains (AlphaFold: POLR3E)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POLR3E is not avaliable on ENCORE database.

45 proteins are bound to POLR3E RNA:

eCLIP assay for POLR3E is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.

70 RBPs can affect the gene expression of POLR3E :

The Knockdown/knockout RNA-Seq assay for POLR3E is not available on ENCORE database.

5 RBPs can affect the splicing of POLR3E :

The Knockdown/knockout RNA-Seq assay for POLR3E is not avaliable on ENCORE database.