PDE4C

General Information

Gene Name : PDE4C
Gene ID : ENSG00000105650.22
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PDE4C)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PDE4C	ENSG00000105650.22	0.00	0.10	0.05	ENCSR000AEF
HepG2	PDE4C	ENSG00000105650.22	1.24	0.87	1.05	ENCSR985KAT
K562	PDE4C	ENSG00000105650.22	0.17	0.04	0.11	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PDE4C is not avaliable on ENCORE database.

Proteins bound to RNA

PDE4C RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for PDE4C is not avaliable on ENCORE database.

1 proteins are bound to PDE4C RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	18331732	18331837	-	CDS,intron-Distal,intron-Proximal	3.08040	3.00054	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for PDE4C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PDE4C is not available on ENCORE database.
117 RBPs can affect the levels of PDE4C.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PDE4C is not available on ENCORE database.

117 RBPs can affect the gene expression of PDE4C :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PDE4C	ENSG00000105650.17	8431.53550	267.97730	4.97550	99999.99999	99999.99999	HepG2	TIAL1
PDE4C	ENSG00000105650.17	61.82200	595.23950	-3.26730	95.34380	92.96350	HepG2	PUM1
PDE4C	ENSG00000105650.17	1361.16130	303.88910	2.16310	67.05950	64.75860	HepG2	RPS19
PDE4C	ENSG00000105650.17	978.35070	218.75510	2.16090	60.61790	58.04000	HepG2	IGF2BP1
PDE4C	ENSG00000105650.17	3795.57390	239.42490	3.98660	54.83220	52.76790	HepG2	RPLP0
PDE4C	ENSG00000105650.17	1329.07420	460.54100	1.52890	45.41020	43.23310	HepG2	AUH
PDE4C	ENSG00000105650.17	866.78910	186.05430	2.21990	30.20660	27.68770	HepG2	SNRNP70
PDE4C	ENSG00000105650.17	198.60770	847.37060	-2.09310	27.23950	25.68010	HepG2	PUS1
PDE4C	ENSG00000105650.17	644.24960	177.03140	1.86350	26.62740	24.87920	HepG2	GPKOW
PDE4C	ENSG00000105650.17	626.96140	222.15800	1.49670	25.66590	23.79890	HepG2	HNRNPF
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 121 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PDE4C is not available on ENCORE database.

1 RBPs can affect the splicing of PDE4C :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	PDE4C	ENSG00000105650.17	chr19	-	18324414	18324628			18324177	18324300	18327550	18327705	0.51600	0.00008	0.00348	included	HepG2	HNRNPK

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PDE4C

General Information

Functions

Localization

Domains (AlphaFold: PDE4C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PDE4C is not avaliable on ENCORE database.

1 proteins are bound to PDE4C RNA:

eCLIP assay for PDE4C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PDE4C is not available on ENCORE database.

117 RBPs can affect the gene expression of PDE4C :

The Knockdown/knockout RNA-Seq assay for PDE4C is not available on ENCORE database.

1 RBPs can affect the splicing of PDE4C :

The Knockdown/knockout RNA-Seq assay for PDE4C is not avaliable on ENCORE database.