NREP

General Information

Gene Name : NREP
Gene ID : ENSG00000134986.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NREP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NREP	ENSG00000134986.13	48.16	40.64	44.40	ENCSR000AEF
HepG2	NREP	ENSG00000134986.13	39.48	69.40	54.44	ENCSR985KAT
K562	NREP	ENSG00000134986.13	0.22	0.10	0.16	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NREP is not avaliable on ENCORE database.

Proteins bound to RNA

NREP RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for NREP is not avaliable on ENCORE database.

9 proteins are bound to NREP RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	111093258	111093318	-	5'-UTR,intron-Distal,intron-Proximal	4.18859	17.71274	HepG2	DDX3X
chr5	111092909	111093008	-	5'-UTR,intron-Distal,intron-Proximal	4.56367	10.46790	HepG2	PCBP2
chr5	111093318	111093379	-	5'-UTR,intron-Distal,intron-Proximal	4.13471	8.97908	HepG2	DDX3X
chr5	111092780	111092887	-	5'-UTR,intron-Distal,intron-Proximal	3.20292	7.80135	HepG2	EFTUD2
chr5	111092790	111092856	-	5'-UTR,intron-Distal,intron-Proximal	3.29508	6.92749	HepG2	PRPF8
chr5	111092722	111092780	-	intron-Distal,intron-Proximal	3.39217	6.39581	HepG2	EFTUD2
chr5	111066241	111066377	-	3'-UTR,intron-Distal,intron-Proximal	3.88354	5.62569	HepG2	IGF2BP1
chr5	111093264	111093365	-	5'-UTR,intron-Distal,intron-Proximal	3.64810	5.38934	HepG2	NCBP2
chr5	111091476	111091528	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.43894	4.88012	HepG2	PPIG
chr5	111071114	111071197	-	CDS,intron-Distal,intron-Proximal	4.54122	4.50179	HepG2	CDC40
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 11 entries

eCLIP assay for NREP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NREP is not available on ENCORE database.
116 RBPs can affect the levels of NREP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.

116 RBPs can affect the gene expression of NREP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NREP	ENSG00000134986.9	7728.30800	2468.46180	1.64640	164.34230	162.04200	HepG2	SRFBP1
NREP	ENSG00000134986.9	1117.77320	3463.51920	-1.63160	104.55570	101.76090	HepG2	PCBP1
NREP	ENSG00000134986.9	1329.64130	3524.18000	-1.40630	78.95780	76.99620	HepG2	PTBP1
NREP	ENSG00000134986.9	1411.38070	3115.74850	-1.14250	57.99070	56.13020	HepG2	SRSF9
NREP	ENSG00000134986.9	1120.89910	4307.04900	-1.94200	50.85280	49.01030	HepG2	AKAP1
NREP	ENSG00000134986.9	6838.21150	2302.22170	1.57050	49.12510	46.98990	HepG2	HNRNPLL
NREP	ENSG00000134986.9	733.57100	2384.45510	-1.70070	48.43310	46.42680	HepG2	CELF1
NREP	ENSG00000134986.9	7342.35710	2128.13940	1.78660	45.21050	42.91340	HepG2	CPSF6
NREP	ENSG00000134986.9	1931.67270	3669.27030	-0.92560	38.82300	37.09430	HepG2	SF3B4
NREP	ENSG00000134986.9	1209.53780	3544.14740	-1.55100	33.26370	31.47030	HepG2	DDX6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 116 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.

6 RBPs can affect the splicing of NREP :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NREP	ENSG00000134986.9	chr5	-	111091466	111091527	111071126	111071204	111092832	111092876	0.14100	0.00000	0.00000	included	HepG2	SRSF1
SE	NREP	ENSG00000134986.9	chr5	-	111091466	111091527	111071126	111071204	111092832	111092876	0.08300	0.00001	0.00191	included	HepG2	IGF2BP3
SE	NREP	ENSG00000134986.9	chr5	-	111091466	111091527	111071126	111071204	111092832	111092876	0.13300	0.00005	0.00413	included	HepG2	PCBP1
SE	NREP	ENSG00000134986.9	chr5	-	111091466	111091527	111071126	111071204	111092832	111092876	0.07300	0.00017	0.01893	included	HepG2	TBRG4
A3SS	NREP	ENSG00000134986.9	chr5	-	111091466	111091623	111091466	111091527	111092832	111092876	-0.12300	0.00090	0.06364	shorter	HepG2	SF3B4
SE	NREP	ENSG00000134986.9	chr5	-	111091466	111091623	111071192	111071204	111092832	111092876	0.05900	0.00620	0.08955	included	HepG2	U2AF1

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NREP

General Information

Functions

Localization

Domains (AlphaFold: NREP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NREP is not avaliable on ENCORE database.

9 proteins are bound to NREP RNA:

eCLIP assay for NREP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.

116 RBPs can affect the gene expression of NREP :

The Knockdown/knockout RNA-Seq assay for NREP is not available on ENCORE database.

6 RBPs can affect the splicing of NREP :

The Knockdown/knockout RNA-Seq assay for NREP is not avaliable on ENCORE database.