L3HYPDH

General Information

Gene Name : L3HYPDH
Gene ID : ENSG00000126790.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: L3HYPDH)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	L3HYPDH	ENSG00000126790.11	10.67	7.86	9.27	ENCSR000AEF
HepG2	L3HYPDH	ENSG00000126790.11	14.72	20.52	17.62	ENCSR985KAT
K562	L3HYPDH	ENSG00000126790.11	8.19	8.63	8.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for L3HYPDH is not avaliable on ENCORE database.

Proteins bound to RNA

L3HYPDH RNA is bound by 17 proteins.

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eCLIP assay for L3HYPDH is not avaliable on ENCORE database.

17 proteins are bound to L3HYPDH RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	59942549	59942623	-	CDS,intron-Distal,intron-Proximal	5.03656	23.13012	HepG2	PRPF8
chr14	59932136	59932203	-	intron-Distal,intron-Proximal	6.08091	18.42616	HepG2	NKRF
chr14	59950980	59951107	-	5'-UTR,CDS,intron-Distal	4.10037	12.15891	HepG2	NCBP2
chr14	59950361	59950468	-	5'-UTR,intron-Distal,intron-Proximal	3.89213	11.71568	HepG2	QKI
chr14	59932121	59932195	-	intron-Distal,intron-Proximal	4.95655	11.45619	HepG2	XRN2
chr14	59942809	59942869	-	CDS,intron-Distal,intron-Proximal	3.35250	9.25770	HepG2	BCLAF1
chr14	59940392	59940437	-	intron-Distal	5.49597	8.60492	HepG2	PCBP2
chr14	59942691	59942726	-	CDS,intron-Distal,intron-Proximal	4.72304	7.97334	HepG2	BCLAF1
chr14	59942658	59942727	-	CDS,intron-Distal,intron-Proximal	3.83464	7.69921	HepG2	PPIG
chr14	59942489	59942554	-	intron-Distal,intron-Proximal	3.21287	7.48835	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 31 entries

eCLIP assay for L3HYPDH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for L3HYPDH is not available on ENCORE database.
52 RBPs can affect the levels of L3HYPDH.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for L3HYPDH is not available on ENCORE database.

52 RBPs can affect the gene expression of L3HYPDH :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
L3HYPDH	ENSG00000126790.7	826.86510	282.26170	1.55050	45.64460	43.31120	HepG2	HNRNPL
L3HYPDH	ENSG00000126790.7	63.20170	197.27610	-1.64220	10.84970	9.82220	K562	PUS1
L3HYPDH	ENSG00000126790.7	128.08230	293.30990	-1.19540	9.67250	8.65070	HepG2	PUF60
L3HYPDH	ENSG00000126790.7	78.30580	198.89700	-1.34480	8.70830	7.48050	K562	AKAP8L
L3HYPDH	ENSG00000126790.7	79.23690	192.19530	-1.27830	8.10490	7.12010	K562	RBM15
L3HYPDH	ENSG00000126790.7	400.16220	196.87040	1.02320	8.00580	6.90190	HepG2	MAGOH
L3HYPDH	ENSG00000126790.7	260.60520	119.82100	1.12090	8.17620	6.87380	HepG2	UCHL5
L3HYPDH	ENSG00000126790.7	403.24010	189.89840	1.08630	7.10160	6.02790	HepG2	EIF4B
L3HYPDH	ENSG00000126790.7	338.90300	176.47540	0.94130	6.41850	5.53600	HepG2	EIF2S1
L3HYPDH	ENSG00000126790.7	92.20680	191.15030	-1.05180	6.07080	5.28190	K562	AGGF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for L3HYPDH is not available on ENCORE database.

8 RBPs can affect the splicing of L3HYPDH :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.41800	0.00000	0.00558	included	HepG2	FAM120A
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.47900	0.00000	0.00000	included	HepG2	HNRNPL
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.12100	0.00001	0.00432	included	HepG2	RBFOX2
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.23400	0.00003	0.00388	included	HepG2	RBM22
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.30700	0.00016	0.04357	included	HepG2	EIF3D
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.13200	0.00024	0.02995	included	HepG2	DDX59
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	-0.20500	0.00057	0.03278	excluded	HepG2	PTBP1
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.12400	0.00058	0.06129	included	HepG2	LARP4
SE	L3HYPDH	ENSG00000126790.7	chr14	-	59941156	59941244	59939688	59939808	59942586	59942724	0.14500	0.00165	0.09117	included	K562	HNRNPL

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

L3HYPDH

General Information

Functions

Localization

Domains (AlphaFold: L3HYPDH)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for L3HYPDH is not avaliable on ENCORE database.

17 proteins are bound to L3HYPDH RNA:

eCLIP assay for L3HYPDH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for L3HYPDH is not available on ENCORE database.

52 RBPs can affect the gene expression of L3HYPDH :

The Knockdown/knockout RNA-Seq assay for L3HYPDH is not available on ENCORE database.

8 RBPs can affect the splicing of L3HYPDH :

The Knockdown/knockout RNA-Seq assay for L3HYPDH is not avaliable on ENCORE database.