GIPC2

General Information

Gene Name : GIPC2
Gene ID : ENSG00000137960.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GIPC2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GIPC2	ENSG00000137960.5	0.00	0.02	0.01	ENCSR000AEF
HepG2	GIPC2	ENSG00000137960.5	5.24	11.03	8.13	ENCSR985KAT
K562	GIPC2	ENSG00000137960.5	0.00	0.01	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GIPC2 is not avaliable on ENCORE database.

Proteins bound to RNA

GIPC2 RNA is bound by 15 proteins.

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eCLIP assay for GIPC2 is not avaliable on ENCORE database.

15 proteins are bound to GIPC2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	78448080	78448213	+	intron-Distal	5.30153	18.13366	HepG2	QKI
chr1	78478815	78478858	+	CDS,intron-Distal	4.65663	17.65246	K562	RBM15
chr1	78452125	78452272	+	intron-Distal	4.77938	16.70440	K562	PTBP1
chr1	78481978	78482082	+	3'-UTR,intron-Distal	3.59258	16.61712	K562	PUM2
chr1	78572782	78572911	+	intron-Distal	6.21006	16.44511	HepG2	PCBP2
chr1	78572727	78572891	+	intron-Distal	5.18663	14.28299	HepG2	PTBP1
chr1	78451803	78451926	+	intron-Distal	4.13403	12.68275	HepG2	SUGP2
chr1	78482653	78482751	+	3'-UTR,intron-Distal	3.61950	12.29741	K562	KHSRP
chr1	78448073	78448194	+	intron-Distal	4.21617	11.84040	K562	QKI
chr1	78454663	78454741	+	intron-Distal	5.54503	11.35201	HepG2	SUGP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 49 entries

eCLIP assay for GIPC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GIPC2 is not available on ENCORE database.
104 RBPs can affect the levels of GIPC2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.

104 RBPs can affect the gene expression of GIPC2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GIPC2	ENSG00000137960.5	558.11950	1538.17550	-1.46260	54.56010	52.81410	HepG2	PTBP1
GIPC2	ENSG00000137960.5	438.21120	1696.79350	-1.95310	42.79420	40.33640	HepG2	HNRNPK
GIPC2	ENSG00000137960.5	550.55470	2048.43200	-1.89560	35.62440	33.99880	HepG2	AKAP1
GIPC2	ENSG00000137960.5	540.76200	1685.45150	-1.64010	31.03220	29.29610	HepG2	DDX6
GIPC2	ENSG00000137960.5	2271.51380	851.11420	1.41610	30.76400	29.06470	HepG2	PUF60
GIPC2	ENSG00000137960.5	684.62130	1359.90910	-0.99010	28.82300	27.40510	HepG2	SRSF9
GIPC2	ENSG00000137960.5	816.88200	1594.32460	-0.96470	27.47040	25.88660	HepG2	RECQL
GIPC2	ENSG00000137960.5	345.30100	757.12390	-1.13270	24.67000	23.26490	HepG2	ACO1
GIPC2	ENSG00000137960.5	928.26830	1711.86800	-0.88300	23.84790	22.57160	HepG2	NELFE
GIPC2	ENSG00000137960.5	1800.86050	1030.66740	0.80500	23.21250	22.04500	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.

3 RBPs can affect the splicing of GIPC2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GIPC2	ENSG00000137960.5	chr1	+	78558440	78558660	78546358	78546544	78560635	78560816	0.17700	0.00000	0.00000	included	HepG2	PTBP1
SE	GIPC2	ENSG00000137960.5	chr1	+	78560635	78560816	78546358	78546544	78585076	78585183	0.08700	0.00005	0.00614	included	HepG2	TIAL1
SE	GIPC2	ENSG00000137960.5	chr1	+	78585076	78585183	78546358	78546544	78591564	78591646	-0.11400	0.00031	0.02032	excluded	HepG2	PTBP1
SE	GIPC2	ENSG00000137960.5	chr1	+	78560635	78560816	78546358	78546544	78585076	78585183	0.07500	0.00153	0.05972	included	HepG2	HNRNPU

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GIPC2

General Information

Functions

Localization

Domains (AlphaFold: GIPC2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GIPC2 is not avaliable on ENCORE database.

15 proteins are bound to GIPC2 RNA:

eCLIP assay for GIPC2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.

104 RBPs can affect the gene expression of GIPC2 :

The Knockdown/knockout RNA-Seq assay for GIPC2 is not available on ENCORE database.

3 RBPs can affect the splicing of GIPC2 :

The Knockdown/knockout RNA-Seq assay for GIPC2 is not avaliable on ENCORE database.