GAN

General Information

Gene Name : GAN
Gene ID : ENSG00000261609.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GAN)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GAN	ENSG00000261609.6	1.03	0.92	0.98	ENCSR000AEF
HepG2	GAN	ENSG00000261609.6	2.07	2.54	2.30	ENCSR985KAT
K562	GAN	ENSG00000261609.6	1.79	1.58	1.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GAN is not avaliable on ENCORE database.

Proteins bound to RNA

GAN RNA is bound by 12 proteins.

CanvasJS.com

eCLIP assay for GAN is not avaliable on ENCORE database.

12 proteins are bound to GAN RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	81420016	81420085	+	3'-UTR,intron-Distal	4.61337	12.68141	K562	TARDBP
chr16	81397413	81397548	+	CDS	4.35982	7.53358	HepG2	BCLAF1
chr16	81351895	81351983	+	intron-Distal	3.39168	7.29915	K562	KHSRP
chr16	81351793	81351895	+	intron-Distal	4.69406	6.93191	K562	KHSRP
chr16	81405634	81405726	+	intron-Distal	4.76459	6.36200	HepG2	PTBP1
chr16	81349130	81349241	+	intron-Distal	4.33279	5.15063	HepG2	CSTF2T
chr16	81350104	81350203	+	intron-Distal	4.85234	4.95161	K562	GTF2F1
chr16	81405660	81405728	+	intron-Distal	4.99128	4.90095	K562	PTBP1
chr16	81386127	81386249	+	intron-Distal	4.64433	4.40618	K562	PTBP1
chr16	81412390	81412461	+	3'-UTR	3.91261	4.19039	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 21 entries

eCLIP assay for GAN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GAN is not available on ENCORE database.
92 RBPs can affect the levels of GAN.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

92 RBPs can affect the gene expression of GAN :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GAN	ENSG00000261609.3	1468.88620	774.51350	0.92330	21.98340	20.80510	HepG2	RBM22
GAN	ENSG00000261609.3	1500.58550	874.80850	0.77840	20.28530	19.25560	HepG2	SRFBP1
GAN	ENSG00000261609.3	241.56310	530.66120	-1.13540	19.82990	18.23490	HepG2	DNAJC2
GAN	ENSG00000261609.3	271.72800	585.54670	-1.10760	18.74860	17.44860	HepG2	TRIM56
GAN	ENSG00000261609.3	1002.40110	538.58330	0.89610	18.45810	17.12020	HepG2	UTP3
GAN	ENSG00000261609.3	217.34400	540.54290	-1.31440	16.27020	14.91460	HepG2	HNRNPA1
GAN	ENSG00000261609.3	1363.64660	638.26100	1.09520	15.54410	14.12630	HepG2	NCBP2
GAN	ENSG00000261609.3	267.19250	531.90140	-0.99330	14.65880	13.35220	HepG2	SAFB2
GAN	ENSG00000261609.3	511.68340	889.22540	-0.79730	14.28770	12.80950	K562	UPF1
GAN	ENSG00000261609.3	316.33530	597.27140	-0.91690	14.05030	12.77390	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 103 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

1 RBPs can affect the splicing of GAN :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	GAN	ENSG00000261609.3	chr16	+	81397377	81397548			81397398	81397548	81396103	81396216	0.11000	0.01809	0.08752	longer	K562	AQR

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GAN

General Information

Functions

Localization

Domains (AlphaFold: GAN)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GAN is not avaliable on ENCORE database.

12 proteins are bound to GAN RNA:

eCLIP assay for GAN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

92 RBPs can affect the gene expression of GAN :

The Knockdown/knockout RNA-Seq assay for GAN is not available on ENCORE database.

1 RBPs can affect the splicing of GAN :

The Knockdown/knockout RNA-Seq assay for GAN is not avaliable on ENCORE database.