DCAF13

General Information

Gene Name : DCAF13
Gene ID : ENSG00000164934.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DCAF13)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DCAF13	ENSG00000164934.13	66.87	56.89	61.88	ENCSR000AEF
HepG2	DCAF13	ENSG00000164934.13	41.80	56.97	49.38	ENCSR985KAT
K562	DCAF13	ENSG00000164934.13	87.20	94.28	90.74	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DCAF13 is not avaliable on ENCORE database.

Proteins bound to RNA

DCAF13 RNA is bound by 14 proteins.

CanvasJS.com

eCLIP assay for DCAF13 is not avaliable on ENCORE database.

14 proteins are bound to DCAF13 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	104455073	104455190	+	3'-UTR,CDS	3.90716	15.08036	K562	PUM2
chr8	104427679	104427740	+	5'-UTR,CDS	3.68432	13.41602	K562	DDX3X
chr8	104427625	104427679	+	5'-UTR,CDS	4.80611	10.52516	K562	DDX3X
chr8	104442781	104442827	+	intron-Proximal	5.62204	10.42871	HepG2	SF3B4
chr8	104452403	104452502	+	CDS,intron-Proximal	4.71832	10.38007	K562	UCHL5
chr8	104451114	104451193	+	intron-Distal	4.67114	10.17421	K562	QKI
chr8	104452395	104452507	+	CDS,intron-Proximal	3.22036	10.08361	K562	ZNF622
chr8	104439515	104439635	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.35181	8.55250	K562	KHSRP
chr8	104432496	104432683	+	CDS,intron-Distal	3.14042	8.46305	K562	ZNF622
chr8	104455020	104455136	+	3'-UTR,CDS,intron-Proximal	3.32651	6.85184	K562	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 31 entries

eCLIP assay for DCAF13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DCAF13 is not available on ENCORE database.
96 RBPs can affect the levels of DCAF13.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.

96 RBPs can affect the gene expression of DCAF13 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DCAF13	ENSG00000164934.9	1469.23570	881.51500	0.73690	17.11790	15.81730	HepG2	UTP3
DCAF13	ENSG00000164934.9	2150.26190	2976.61490	-0.46920	15.35190	13.78650	K562	NSUN2
DCAF13	ENSG00000164934.9	1491.27950	943.27820	0.66070	13.51540	12.64000	HepG2	SRSF1
DCAF13	ENSG00000164934.9	507.90300	908.76890	-0.83940	12.96250	12.01650	HepG2	TIAL1
DCAF13	ENSG00000164934.9	1212.02890	2046.26830	-0.75560	11.23450	10.10040	K562	HNRNPC
DCAF13	ENSG00000164934.9	992.67540	1440.92020	-0.53760	10.04000	9.18020	HepG2	SSB
DCAF13	ENSG00000164934.9	703.51390	1252.87300	-0.83260	10.27800	9.15370	HepG2	HNRNPLL
DCAF13	ENSG00000164934.9	507.02730	834.06920	-0.71810	10.47720	9.09070	HepG2	PPIL4
DCAF13	ENSG00000164934.9	716.53420	1312.85230	-0.87360	10.07900	8.91130	HepG2	GPKOW
DCAF13	ENSG00000164934.9	3631.98770	2543.51800	0.51380	10.87450	8.90010	K562	DKC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 115 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.

4 RBPs can affect the splicing of DCAF13 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	DCAF13	ENSG00000164934.9	chr8	+	104453660	104453846			104453682	104453846	104452363	104452499	0.09100	0.00000	0.00000	longer	K562	AQR
RI	DCAF13	ENSG00000164934.9	chr8	+	104439324	104442917			104439324	104439480	104442839	104442917	0.05600	0.00000	0.00000	included	K562	AQR
SE	DCAF13	ENSG00000164934.9	chr8	+	104433202	104433310			104426941	104427744	104438283	104438373	-0.06500	0.00002	0.00047	excluded	K562	AQR
RI	DCAF13	ENSG00000164934.9	chr8	+	104439324	104442917			104439324	104439480	104442839	104442917	0.06200	0.00010	0.00329	included	HepG2	G3BP1
MXE	DCAF13	ENSG00000164934.9	chr8	+	104432491	104432691	104433202	104433310	104427639	104427744	104438283	104438373	-0.13700	0.00011	0.02483	2included	HepG2	SUB1
SE	DCAF13	ENSG00000164934.9	chr8	+	104432491	104432691			104427639	104427744	104438283	104438373	-0.06200	0.00040	0.01486	excluded	HepG2	SF3A3
SE	DCAF13	ENSG00000164934.9	chr8	+	104444886	104444969			104439275	104439480	104447853	104448014	-0.05400	0.00055	0.00738	excluded	K562	AQR

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DCAF13

General Information

Functions

Localization

Domains (AlphaFold: DCAF13)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DCAF13 is not avaliable on ENCORE database.

14 proteins are bound to DCAF13 RNA:

eCLIP assay for DCAF13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.

96 RBPs can affect the gene expression of DCAF13 :

The Knockdown/knockout RNA-Seq assay for DCAF13 is not available on ENCORE database.

4 RBPs can affect the splicing of DCAF13 :

The Knockdown/knockout RNA-Seq assay for DCAF13 is not avaliable on ENCORE database.