CTSS

General Information

Gene Name : CTSS
Gene ID : ENSG00000163131.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CTSS)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CTSS	ENSG00000163131.10	49.02	39.30	44.16	ENCSR000AEF
HepG2	CTSS	ENSG00000163131.10	0.78	0.74	0.76	ENCSR985KAT
K562	CTSS	ENSG00000163131.10	8.07	6.08	7.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CTSS is not avaliable on ENCORE database.

Proteins bound to RNA

CTSS RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for CTSS is not avaliable on ENCORE database.

1 proteins are bound to CTSS RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	150724424	150724484	-	CDS,intron-Distal	4.82123	3.02572	K562	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for CTSS is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CTSS is not available on ENCORE database.
97 RBPs can affect the levels of CTSS.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CTSS is not available on ENCORE database.

97 RBPs can affect the gene expression of CTSS :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CTSS	ENSG00000163131.6	523.58250	155.73620	1.74920	33.49460	31.31730	K562	UPF1
CTSS	ENSG00000163131.6	234.57240	16.35580	3.84210	30.44500	28.23020	HepG2	PRPF8
CTSS	ENSG00000163131.6	278.33840	12.72470	4.45100	24.84690	23.25680	HepG2	HNRNPA1
CTSS	ENSG00000163131.6	200.85030	34.87590	2.52570	19.26390	17.59240	HepG2	PUM2
CTSS	ENSG00000163131.6	188.42550	41.83610	2.17110	17.57920	16.60330	HepG2	SRFBP1
CTSS	ENSG00000163131.6	75.28360	253.12780	-1.74950	17.84980	15.51560	K562	SF3B4
CTSS	ENSG00000163131.6	820.96070	366.00800	1.16530	18.18950	15.25480	K562	UBE2L3
CTSS	ENSG00000163131.6	687.92480	338.26560	1.02400	14.58690	12.40700	K562	PUM2
CTSS	ENSG00000163131.6	404.75680	134.14220	1.59320	13.05580	11.67240	K562	EIF2S2
CTSS	ENSG00000163131.6	124.76200	19.51730	2.67630	13.27460	11.45540	HepG2	EIF3D
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 117 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CTSS

General Information

Functions

Localization

Domains (AlphaFold: CTSS)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CTSS is not avaliable on ENCORE database.

1 proteins are bound to CTSS RNA:

eCLIP assay for CTSS is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CTSS is not available on ENCORE database.

97 RBPs can affect the gene expression of CTSS :

The Knockdown/knockout RNA-Seq assay for CTSS is not available on ENCORE database.

No RBPs affect the alternative splcing events of CTSS on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CTSS is not avaliable on ENCORE database.