ANKRD27

General Information

Gene Name : ANKRD27
Gene ID : ENSG00000105186.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ANKRD27)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ANKRD27	ENSG00000105186.15	16.51	19.15	17.83	ENCSR000AEF
HepG2	ANKRD27	ENSG00000105186.15	17.35	16.99	17.17	ENCSR985KAT
K562	ANKRD27	ENSG00000105186.15	39.26	40.51	39.88	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ANKRD27 is not avaliable on ENCORE database.

Proteins bound to RNA

ANKRD27 RNA is bound by 26 proteins.

CanvasJS.com

eCLIP assay for ANKRD27 is not avaliable on ENCORE database.

26 proteins are bound to ANKRD27 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	33137369	33137439	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.23951	22.65351	K562	PUM2
chr19	33130268	33130393	-	CDS,intron-Distal	3.91676	18.34974	K562	DDX24
chr19	33133020	33133051	-	CDS,intron-Distal	4.92188	17.43234	K562	YBX3
chr19	33134026	33134083	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.24499	15.25586	K562	DDX24
chr19	33098492	33098528	-	intron-Distal,intron-Proximal	5.14643	13.75908	K562	AQR
chr19	33134188	33134259	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.49963	13.19442	K562	DDX24
chr19	33134396	33134453	-	intron-Distal,intron-Proximal	6.19877	12.75970	K562	EFTUD2
chr19	33130313	33130395	-	CDS,intron-Distal,intron-Proximal	3.44820	12.48200	K562	ZNF622
chr19	33132992	33133020	-	CDS,intron-Distal	4.57186	12.40060	K562	YBX3
chr19	33089067	33089203	-	CDS,intron-Distal,intron-Proximal	5.47148	10.56686	K562	FMR1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 82 entries

eCLIP assay for ANKRD27 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ANKRD27 is not available on ENCORE database.
67 RBPs can affect the levels of ANKRD27.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.

67 RBPs can affect the gene expression of ANKRD27 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ANKRD27	ENSG00000105186.10	1034.13590	2036.99050	-0.97800	34.11180	31.82680	K562	MTPAP
ANKRD27	ENSG00000105186.10	591.63490	1203.38050	-1.02430	27.52900	26.37480	HepG2	SRFBP1
ANKRD27	ENSG00000105186.10	1236.18580	2830.63180	-1.19520	27.90590	26.24560	K562	AQR
ANKRD27	ENSG00000105186.10	860.67890	1757.00520	-1.02960	21.69790	20.10720	K562	HNRNPC
ANKRD27	ENSG00000105186.10	1748.53930	3166.79400	-0.85690	18.23000	16.22330	K562	GRSF1
ANKRD27	ENSG00000105186.10	320.35430	622.95260	-0.95950	12.81430	11.87360	HepG2	TIAL1
ANKRD27	ENSG00000105186.10	771.30660	1332.41190	-0.78870	13.42390	11.72900	K562	POLR2G
ANKRD27	ENSG00000105186.10	405.61000	665.83050	-0.71510	10.92280	9.77940	HepG2	SMN1
ANKRD27	ENSG00000105186.10	728.56620	1110.24400	-0.60770	10.05620	8.88280	HepG2	AUH
ANKRD27	ENSG00000105186.10	1337.57830	2038.14680	-0.60760	9.65430	8.46820	K562	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 77 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.

10 RBPs can affect the splicing of ANKRD27 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ANKRD27	ENSG00000105186.10	chr19	-	33137364	33137521			33135230	33135385	33140587	33140698	-0.20500	0.00000	0.00008	excluded	K562	SRSF1
A3SS	ANKRD27	ENSG00000105186.10	chr19	-	33090877	33090985			33090877	33090956	33092920	33093032	0.10400	0.00000	0.00005	longer	K562	AQR
MXE	ANKRD27	ENSG00000105186.10	chr19	-	33106563	33106686	33108494	33108539	33098540	33098738	33110165	33110285	0.19600	0.00001	0.00276	1included	K562	PUM1
SE	ANKRD27	ENSG00000105186.10	chr19	-	33134028	33134105			33132929	33133051	33134192	33134258	-0.08900	0.00010	0.00297	excluded	K562	U2AF2
MXE	ANKRD27	ENSG00000105186.10	chr19	-	33134336	33134390	33134477	33134537	33134192	33134258	33135230	33135385	0.12700	0.00027	0.00736	1included	K562	DROSHA
MXE	ANKRD27	ENSG00000105186.10	chr19	-	33134336	33134390	33134477	33134639	33134192	33134258	33135230	33135385	0.05400	0.00048	0.00480	1included	K562	AQR
SE	ANKRD27	ENSG00000105186.10	chr19	-	33134028	33134105			33132929	33133051	33134192	33134258	-0.09400	0.00062	0.01290	excluded	K562	HNRNPC
A3SS	ANKRD27	ENSG00000105186.10	chr19	-	33095168	33095363			33095168	33095330	33096740	33096860	0.08200	0.00082	0.00580	longer	K562	AQR
SE	ANKRD27	ENSG00000105186.10	chr19	-	33149819	33149951			33140587	33140698	33165976	33166075	-0.10100	0.00083	0.01807	excluded	K562	SF3B4
A3SS	ANKRD27	ENSG00000105186.10	chr19	-	33137364	33137542			33137364	33137521	33140587	33140698	0.05600	0.00085	0.00599	longer	K562	AQR

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ANKRD27

General Information

Functions

Localization

Domains (AlphaFold: ANKRD27)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ANKRD27 is not avaliable on ENCORE database.

26 proteins are bound to ANKRD27 RNA:

eCLIP assay for ANKRD27 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.

67 RBPs can affect the gene expression of ANKRD27 :

The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.

10 RBPs can affect the splicing of ANKRD27 :

The Knockdown/knockout RNA-Seq assay for ANKRD27 is not avaliable on ENCORE database.