TJP2

General Information

Gene Name : TJP2
Gene ID : ENSG00000119139.19
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TJP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TJP2	ENSG00000119139.19	23.13	20.12	21.62	ENCSR000AEF
HepG2	TJP2	ENSG00000119139.19	103.07	134.22	118.64	ENCSR985KAT
K562	TJP2	ENSG00000119139.19	9.47	11.59	10.53	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TJP2 is not avaliable on ENCORE database.

Proteins bound to RNA

TJP2 RNA is bound by 50 proteins.

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eCLIP assay for TJP2 is not avaliable on ENCORE database.

50 proteins are bound to TJP2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	71768107	71768144	+	intron-Distal	5.70365	400.00000	HepG2	XPO5
chr9	71768098	71768107	+	intron-Distal	5.48954	85.70261	HepG2	XPO5
chr9	71786261	71786382	+	intron-Distal	5.78175	41.64932	HepG2	QKI
chr9	71840987	71841066	+	CDS	3.88943	35.70732	HepG2	BCLAF1
chr9	71845076	71845143	+	CDS	3.93201	29.53820	HepG2	BCLAF1
chr9	71852000	71852052	+	CDS	3.94596	28.71300	HepG2	BCLAF1
chr9	71849331	71849421	+	CDS,intron-Proximal	4.53012	26.65345	HepG2	U2AF2
chr9	71869048	71869111	+	intron-Proximal	5.62601	26.19838	K562	SF3B4
chr9	71852851	71852889	+	CDS	4.22704	25.01895	HepG2	BCLAF1
chr9	71852811	71852851	+	CDS	3.77748	24.68571	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 236 entries

eCLIP assay for TJP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TJP2 is not available on ENCORE database.
186 RBPs can affect the levels of TJP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TJP2 is not available on ENCORE database.

186 RBPs can affect the gene expression of TJP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TJP2	ENSG00000119139.12	4451.03360	1264.88810	1.81500	205.67620	201.96720	K562	NSUN2
TJP2	ENSG00000119139.12	3484.62970	1138.41260	1.61390	94.87250	91.58100	K562	MTPAP
TJP2	ENSG00000119139.12	3366.15290	7474.02710	-1.15080	77.43360	75.68270	HepG2	SSB
TJP2	ENSG00000119139.12	3479.89630	1341.18700	1.37540	77.81880	75.02390	K562	UPF1
TJP2	ENSG00000119139.12	4547.74990	1147.61260	1.98640	77.94100	74.62330	K562	WDR3
TJP2	ENSG00000119139.12	3251.69410	1278.71190	1.34640	73.06910	69.92280	K562	SRPK2
TJP2	ENSG00000119139.12	3442.99030	7069.12790	-1.03790	56.29300	54.59500	HepG2	NELFE
TJP2	ENSG00000119139.12	3301.12250	890.96760	1.88940	58.40600	54.50720	K562	UCHL5
TJP2	ENSG00000119139.12	3538.14680	1059.12760	1.74000	53.23710	49.92670	K562	BOP1
TJP2	ENSG00000119139.12	4840.34070	1662.82460	1.54140	50.76190	48.54380	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 250 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TJP2 is not available on ENCORE database.

20 RBPs can affect the splicing of TJP2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TJP2	ENSG00000119139.12	chr9	+	71864290	71864401	71862927	71863140	71865950	71866280	-0.09800	0.00000	excluded	HepG2	U2AF1
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.35400	0.00000	excluded	K562	AKAP8L
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.19400	0.00000	excluded	HepG2	HNRNPK
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.09500	0.00000	excluded	HepG2	DDX59
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.40600	0.00000	excluded	K562	PUS1
SE	TJP2	ENSG00000119139.12	chr9	+	71849354	71849463	71844997	71845148	71850943	71851154	0.06300	0.00009	included	HepG2	PTBP1
SE	TJP2	ENSG00000119139.12	chr9	+	71864290	71864401	71862927	71863140	71865950	71866280	-0.10700	0.00017	excluded	HepG2	PTBP1
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.31500	0.00000	excluded	K562	UTP18
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.29800	0.00000	excluded	K562	RBM15
SE	TJP2	ENSG00000119139.12	chr9	+	71865950	71866280	71862927	71863140	71867730	71867816	-0.36900	0.00000	excluded	K562	AGGF1

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TJP2

General Information

Functions

Localization

Domains (AlphaFold: TJP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TJP2 is not avaliable on ENCORE database.

50 proteins are bound to TJP2 RNA:

eCLIP assay for TJP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TJP2 is not available on ENCORE database.

186 RBPs can affect the gene expression of TJP2 :

The Knockdown/knockout RNA-Seq assay for TJP2 is not available on ENCORE database.

20 RBPs can affect the splicing of TJP2 :

The Knockdown/knockout RNA-Seq assay for TJP2 is not avaliable on ENCORE database.