SORBS2

General Information

Gene Name : SORBS2
Gene ID : ENSG00000154556.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SORBS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SORBS2	ENSG00000154556.18	0.73	0.47	0.60	ENCSR000AEF
HepG2	SORBS2	ENSG00000154556.18	36.23	35.33	35.78	ENCSR985KAT
K562	SORBS2	ENSG00000154556.18	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SORBS2 is not avaliable on ENCORE database.

Proteins bound to RNA

SORBS2 RNA is bound by 21 proteins.

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eCLIP assay for SORBS2 is not avaliable on ENCORE database.

21 proteins are bound to SORBS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	186598463	186598598	-	CDS,intron-Distal,intron-Proximal	4.63966	23.81193	HepG2	HNRNPL
chr4	186598472	186598588	-	CDS,intron-Distal,intron-Proximal	5.03501	15.32767	HepG2	QKI
chr4	186559920	186560090	-	CDS,intron-Distal,intron-Proximal	3.97094	11.67401	HepG2	DDX59
chr4	186631025	186631072	-	intron-Distal	5.05402	11.26059	K562	TROVE2
chr4	186559783	186559920	-	intron-Distal	4.87221	11.21342	HepG2	DDX59
chr4	186599572	186599655	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.33762	10.76374	HepG2	BCLAF1
chr4	186682642	186682795	-	5'-UTR,intron-Distal,intron-Proximal	3.30124	9.52820	HepG2	SUGP2
chr4	186567186	186567246	-	intron-Distal,intron-Proximal	4.29162	9.48825	HepG2	U2AF2
chr4	186683142	186683216	-	intron-Distal	4.91795	8.16055	HepG2	SUGP2
chr4	186598638	186598712	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.20702	7.97897	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 46 entries

eCLIP assay for SORBS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SORBS2 is not available on ENCORE database.
109 RBPs can affect the levels of SORBS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SORBS2 is not available on ENCORE database.

109 RBPs can affect the gene expression of SORBS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SORBS2	ENSG00000154556.13	439.15700	1418.64720	-1.69170	52.12150	50.42850	HepG2	RBM22
SORBS2	ENSG00000154556.13	505.32290	1230.63650	-1.28410	30.60620	28.54810	HepG2	PUM2
SORBS2	ENSG00000154556.13	238.13300	787.94270	-1.72630	27.12910	25.57830	HepG2	BOP1
SORBS2	ENSG00000154556.13	2513.73180	1363.13110	0.88280	24.93480	23.47860	HepG2	TAF15
SORBS2	ENSG00000154556.13	1476.40040	775.03950	0.92960	24.29780	22.78100	HepG2	DKC1
SORBS2	ENSG00000154556.13	2067.26900	819.90810	1.33410	24.45240	22.76000	HepG2	GPKOW
SORBS2	ENSG00000154556.13	418.50970	1175.17990	-1.48950	22.10400	20.31040	HepG2	FIP1L1
SORBS2	ENSG00000154556.13	708.59160	1478.25620	-1.06090	21.04190	19.47150	HepG2	AUH
SORBS2	ENSG00000154556.13	2225.89490	1391.07350	0.67810	18.44950	17.37550	HepG2	SSB
SORBS2	ENSG00000154556.13	723.90270	1225.64740	-0.75970	18.57900	16.96940	HepG2	DAZAP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SORBS2 is not available on ENCORE database.

28 RBPs can affect the splicing of SORBS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SORBS2	ENSG00000154556.13	chr4	-	186572937	186572982			186570620	186570810	186573815	186573882	0.23000	0.00462	included	HepG2	NKRF
SE	SORBS2	ENSG00000154556.13	chr4	-	186572937	186572982			186570620	186570810	186573815	186573882	-0.32200	0.00000	excluded	HepG2	U2AF2
SE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000			186599949	186599976	186611715	186611765	0.46000	0.00001	included	HepG2	SFPQ
SE	SORBS2	ENSG00000154556.13	chr4	-	186560030	186560189			186551702	186551752	186567821	186567936	0.72300	0.00000	included	HepG2	PTBP1
SE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000			186599949	186599976	186611715	186611765	0.56300	0.00001	included	HepG2	RBFOX2
SE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000			186599949	186599976	186611715	186611765	0.40800	0.00234	included	HepG2	XRCC6
MXE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000	186611715	186611765	186599949	186599976	186696380	186696520	-0.48700	0.00000	2included	HepG2	SFPQ
MXE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000	186611715	186611765	186599949	186599976	186655252	186655308	-0.49000	0.00000	2included	HepG2	SFPQ
MXE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000	186611715	186611765	186599949	186599976	186696380	186696520	-0.44200	0.00013	2included	HepG2	RBFOX2
MXE	SORBS2	ENSG00000154556.13	chr4	-	186605907	186606000	186611715	186611765	186599949	186599976	186655252	186655308	-0.55000	0.00011	2included	HepG2	RBFOX2

Showing 1 to 10 of 52 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SORBS2

General Information

Functions

Localization

Domains (AlphaFold: SORBS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SORBS2 is not avaliable on ENCORE database.

21 proteins are bound to SORBS2 RNA:

eCLIP assay for SORBS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SORBS2 is not available on ENCORE database.

109 RBPs can affect the gene expression of SORBS2 :

The Knockdown/knockout RNA-Seq assay for SORBS2 is not available on ENCORE database.

28 RBPs can affect the splicing of SORBS2 :

The Knockdown/knockout RNA-Seq assay for SORBS2 is not avaliable on ENCORE database.