RPL30

General Information

Gene Name : RPL30
Gene ID : ENSG00000156482.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPL30)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPL30	ENSG00000156482.10	2768.76	2397.86	2583.31	ENCSR000AEF
HepG2	RPL30	ENSG00000156482.10	2198.50	2178.47	2188.48	ENCSR985KAT
K562	RPL30	ENSG00000156482.10	2267.06	2143.05	2205.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPL30 is not avaliable on ENCORE database.

Proteins bound to RNA

RPL30 RNA is bound by 23 proteins.

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eCLIP assay for RPL30 is not avaliable on ENCORE database.

23 proteins are bound to RPL30 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	99054994	99054998	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.48929	400.00000	K562	YBX3
chr8	99054917	99054928	-	3'-UTR,CDS,intron-Distal	3.44294	400.00000	K562	YBX3
chr8	99054872	99054874	-	3'-UTR,CDS,intron-Distal,intron-Proximal	7.28248	400.00000	K562	LIN28B
chr8	99054075	99054079	-	3'-UTR,CDS,intron-Distal	7.37830	400.00000	K562	LIN28B
chr8	99054974	99054978	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.83996	400.00000	K562	YBX3
chr8	99054998	99055003	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.86100	400.00000	K562	YBX3
chr8	99054978	99054984	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.88928	400.00000	K562	YBX3
chr8	99054886	99054891	-	3'-UTR,CDS,intron-Distal	6.44081	400.00000	K562	LIN28B
chr8	99054877	99054907	-	3'-UTR,CDS,intron-Distal	6.83553	400.00000	HepG2	LIN28B
chr8	99054874	99054886	-	3'-UTR,CDS,intron-Distal	7.14730	400.00000	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 142 entries

eCLIP assay for RPL30 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPL30 is not available on ENCORE database.
138 RBPs can affect the levels of RPL30.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPL30 is not available on ENCORE database.

138 RBPs can affect the gene expression of RPL30 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPL30	ENSG00000156482.6	5445.92800	17243.08690	-1.66280	159.75310	157.22890	HepG2	PTBP1
RPL30	ENSG00000156482.6	6817.25580	18738.07720	-1.45870	157.29090	155.15720	HepG2	SRSF1
RPL30	ENSG00000156482.6	7404.34020	19189.74310	-1.37390	119.67260	117.52530	HepG2	NELFE
RPL30	ENSG00000156482.6	6398.03830	14154.83180	-1.14560	96.98090	95.08780	HepG2	SRFBP1
RPL30	ENSG00000156482.6	7816.06840	18674.28580	-1.25650	67.89810	65.61920	HepG2	QKI
RPL30	ENSG00000156482.6	9238.06360	17951.94000	-0.95850	61.58880	59.50750	HepG2	SF3B4
RPL30	ENSG00000156482.6	9323.73590	17872.92280	-0.93880	59.78020	57.72700	HepG2	RECQL
RPL30	ENSG00000156482.6	8999.39710	15244.54310	-0.76040	41.62470	39.98650	HepG2	SRSF9
RPL30	ENSG00000156482.6	5980.70070	18364.94680	-1.61860	40.70700	38.45880	HepG2	MAGOH
RPL30	ENSG00000156482.6	7772.29310	16948.26700	-1.12470	40.60620	38.31520	HepG2	RBM25
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 160 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPL30 is not available on ENCORE database.

7 RBPs can affect the splicing of RPL30 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RPL30	ENSG00000156482.6	chr8	-	99057170	99057310			99054872	99055003	99057574	99057627	-0.05500	0.00000	0.00000	excluded	K562	TARDBP
A5SS	RPL30	ENSG00000156482.6	chr8	-	99057170	99057627			99057574	99057627	99054872	99055003	-0.05500	0.00000	0.00000	shorter	K562	TARDBP
RI	RPL30	ENSG00000156482.6	chr8	-	99057170	99057627			99057170	99057316	99057574	99057627	0.06600	0.00000	0.00000	included	K562	AQR
MXE	RPL30	ENSG00000156482.6	chr8	-	99057170	99057342	99057342	99057485	99054872	99054946	99057574	99057627	0.05600	0.00000	0.00000	1included	K562	AQR
MXE	RPL30	ENSG00000156482.6	chr8	-	99054872	99055003	99057170	99057316	99053948	99054078	99057574	99057627	-0.17700	0.00000	0.00000	2included	K562	DHX30
MXE	RPL30	ENSG00000156482.6	chr8	-	99054872	99054946	99057170	99057316	99053948	99054078	99057574	99057627	-0.17300	0.00000	0.00000	2included	K562	DHX30
MXE	RPL30	ENSG00000156482.6	chr8	-	99054872	99055003	99057170	99057316	99053948	99054078	99057574	99057627	-0.10300	0.00002	0.00159	2included	K562	RBM15
MXE	RPL30	ENSG00000156482.6	chr8	-	99054872	99054946	99057170	99057316	99053948	99054078	99057574	99057627	-0.10300	0.00002	0.00163	2included	K562	RBM15
A3SS	RPL30	ENSG00000156482.6	chr8	-	99054872	99055101			99054872	99055003	99057054	99057316	-0.20900	0.00020	0.00160	shorter	K562	AQR
MXE	RPL30	ENSG00000156482.6	chr8	-	99054872	99055003	99057170	99057316	99053948	99054078	99057574	99057627	-0.08800	0.00027	0.01272	2included	K562	PPIL4

Showing 1 to 10 of 15 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPL30

General Information

Functions

Localization

Domains (AlphaFold: RPL30)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPL30 is not avaliable on ENCORE database.

23 proteins are bound to RPL30 RNA:

eCLIP assay for RPL30 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPL30 is not available on ENCORE database.

138 RBPs can affect the gene expression of RPL30 :

The Knockdown/knockout RNA-Seq assay for RPL30 is not available on ENCORE database.

7 RBPs can affect the splicing of RPL30 :

The Knockdown/knockout RNA-Seq assay for RPL30 is not avaliable on ENCORE database.