MAGED1

General Information

Gene Name : MAGED1
Gene ID : ENSG00000179222.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MAGED1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MAGED1	ENSG00000179222.17	107.50	85.74	96.62	ENCSR000AEF
HepG2	MAGED1	ENSG00000179222.17	129.09	186.28	157.69	ENCSR985KAT
K562	MAGED1	ENSG00000179222.17	24.56	27.68	26.12	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MAGED1 is not avaliable on ENCORE database.

Proteins bound to RNA

MAGED1 RNA is bound by 25 proteins.

CanvasJS.com

eCLIP assay for MAGED1 is not avaliable on ENCORE database.

25 proteins are bound to MAGED1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	51636803	51636846	+	5'-UTR,intron-Distal	3.93421	45.05222	HepG2	DDX3X
chrX	51636846	51636852	+	5'-UTR,intron-Distal,intron-Proximal	4.08937	44.97634	HepG2	DDX3X
chrX	51637364	51637367	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.98172	35.33425	HepG2	DDX3X
chrX	51637367	51637409	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.73161	34.56575	HepG2	DDX3X
chrX	51639805	51639938	+	CDS	4.26317	31.55290	HepG2	RPS3
chrX	51645241	51645340	+	3'-UTR,intron-Proximal	4.06444	29.70805	HepG2	LARP4
chrX	51645241	51645352	+	3'-UTR,intron-Proximal	4.02253	28.90403	HepG2	DDX55
chrX	51641259	51641341	+	CDS,intron-Proximal	4.02274	24.61454	HepG2	PRPF8
chrX	51638709	51638786	+	CDS	4.63331	24.39677	HepG2	G3BP1
chrX	51643312	51643377	+	CDS	6.38784	23.52873	HepG2	G3BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 82 entries

eCLIP assay for MAGED1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MAGED1 is not available on ENCORE database.
125 RBPs can affect the levels of MAGED1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MAGED1 is not available on ENCORE database.

125 RBPs can affect the gene expression of MAGED1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MAGED1	ENSG00000179222.13	3231.84280	11003.30260	-1.76750	205.86390	203.33050	HepG2	SRFBP1
MAGED1	ENSG00000179222.13	4550.55500	11655.99320	-1.35700	107.40290	104.71300	HepG2	ETF1
MAGED1	ENSG00000179222.13	3370.63240	9742.17950	-1.53120	103.78670	101.53900	HepG2	RBM22
MAGED1	ENSG00000179222.13	3892.29660	9073.14470	-1.22100	92.79100	90.08630	HepG2	UTP3
MAGED1	ENSG00000179222.13	3356.72560	7266.66560	-1.11420	78.56540	76.49070	HepG2	ACO1
MAGED1	ENSG00000179222.13	4226.34760	8244.29270	-0.96400	70.55330	68.11750	HepG2	ZC3H8
MAGED1	ENSG00000179222.13	1515.98400	6095.82880	-2.00760	67.17050	64.48540	HepG2	SF3B1
MAGED1	ENSG00000179222.13	3825.81440	7264.45450	-0.92510	64.30380	62.10930	HepG2	CKAP4
MAGED1	ENSG00000179222.13	3318.56690	6921.06010	-1.06040	49.12220	47.36740	HepG2	SRSF9
MAGED1	ENSG00000179222.13	6469.08470	10335.71530	-0.67600	42.88610	41.40400	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 141 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MAGED1 is not available on ENCORE database.

11 RBPs can affect the splicing of MAGED1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MAGED1	ENSG00000179222.13	chrX	+	51641380	51641423	51641209	51641289	51641676	51641739	-0.08500	0.00000	0.00002	excluded	HepG2	U2AF1
SE	MAGED1	ENSG00000179222.13	chrX	+	51637722	51637890	51637364	51637445	51638148	51638856	0.14400	0.00000	0.00000	included	HepG2	U2AF2
SE	MAGED1	ENSG00000179222.13	chrX	+	51641380	51641423	51641209	51641289	51641676	51641739	-0.18500	0.00000	0.00000	excluded	HepG2	U2AF2
SE	MAGED1	ENSG00000179222.13	chrX	+	51637364	51637445	51546102	51546213	51638148	51638856	0.16500	0.00001	0.00596	included	K562	DROSHA
SE	MAGED1	ENSG00000179222.13	chrX	+	51641380	51641423	51641209	51641289	51641676	51641739	-0.05700	0.00001	0.00057	excluded	HepG2	SF3A3
A3SS	MAGED1	ENSG00000179222.13	chrX	+	51640618	51640722	51640642	51640722	51640303	51640367	0.07800	0.00011	0.00095	longer	K562	AQR
SE	MAGED1	ENSG00000179222.13	chrX	+	51595204	51595450	51546102	51546213	51637364	51637445	0.30700	0.00034	0.01732	included	K562	PTBP1
RI	MAGED1	ENSG00000179222.13	chrX	+	51644648	51645450	51644648	51645034	51645241	51645450	-0.06000	0.00049	0.03578	excluded	HepG2	TBRG4
SE	MAGED1	ENSG00000179222.13	chrX	+	51637364	51637445	51546102	51546213	51638148	51638856	0.15600	0.00072	0.05206	included	K562	HNRNPUL1
RI	MAGED1	ENSG00000179222.13	chrX	+	51644648	51645450	51644648	51645034	51645241	51645450	0.05400	0.00086	0.01815	included	HepG2	TIAL1

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MAGED1

General Information

Functions

Localization

Domains (AlphaFold: MAGED1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MAGED1 is not avaliable on ENCORE database.

25 proteins are bound to MAGED1 RNA:

eCLIP assay for MAGED1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MAGED1 is not available on ENCORE database.

125 RBPs can affect the gene expression of MAGED1 :

The Knockdown/knockout RNA-Seq assay for MAGED1 is not available on ENCORE database.

11 RBPs can affect the splicing of MAGED1 :

The Knockdown/knockout RNA-Seq assay for MAGED1 is not avaliable on ENCORE database.