CCT5

General Information

Gene Name : CCT5
Gene ID : ENSG00000150753.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CCT5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CCT5	ENSG00000150753.11	413.03	386.89	399.96	ENCSR000AEF
HepG2	CCT5	ENSG00000150753.11	558.77	540.14	549.45	ENCSR985KAT
K562	CCT5	ENSG00000150753.11	792.35	786.77	789.56	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CCT5 is not avaliable on ENCORE database.

Proteins bound to RNA

CCT5 RNA is bound by 34 proteins.

CanvasJS.com

eCLIP assay for CCT5 is not avaliable on ENCORE database.

34 proteins are bound to CCT5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	10264932	10264977	+	3'-UTR	6.66900	400.00000	HepG2	SUB1
chr5	10265022	10265103	+	3'-UTR	6.12400	78.06819	HepG2	SUB1
chr5	10264977	10265012	+	3'-UTR	8.34240	54.20269	HepG2	SUB1
chr5	10250438	10250492	+	5'-UTR,CDS,intron-Distal	3.60007	45.34318	K562	DDX3X
chr5	10264996	10265017	+	3'-UTR	3.93825	45.26383	K562	PABPC4
chr5	10250492	10250558	+	CDS,intron-Distal,intron-Proximal	3.25826	39.27050	K562	DDX3X
chr5	10264975	10264996	+	3'-UTR	3.48238	34.99392	K562	PABPC4
chr5	10250423	10250571	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.75296	33.62366	K562	GEMIN5
chr5	10250548	10250676	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.32712	31.91664	HepG2	PRPF8
chr5	10264910	10264932	+	3'-UTR	4.00913	27.17025	HepG2	SUB1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 150 entries

eCLIP assay for CCT5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CCT5 is not available on ENCORE database.
131 RBPs can affect the levels of CCT5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CCT5 is not available on ENCORE database.

131 RBPs can affect the gene expression of CCT5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CCT5	ENSG00000150753.7	5903.11660	10709.09590	-0.85930	55.08000	53.58540	HepG2	SRFBP1
CCT5	ENSG00000150753.7	12549.08740	21739.44620	-0.79270	46.71140	44.22800	K562	UPF1
CCT5	ENSG00000150753.7	3178.61740	5919.23920	-0.89700	27.88090	26.59930	HepG2	TIAL1
CCT5	ENSG00000150753.7	3071.64300	7038.55930	-1.19630	27.09810	25.54860	HepG2	BOP1
CCT5	ENSG00000150753.7	6022.25890	9297.87360	-0.62660	26.41580	25.19320	HepG2	SSB
CCT5	ENSG00000150753.7	15417.13280	20502.72790	-0.41130	25.14840	23.24830	K562	NSUN2
CCT5	ENSG00000150753.7	3091.60500	6814.08680	-1.14020	24.56480	22.82310	HepG2	TARDBP
CCT5	ENSG00000150753.7	3234.58820	7074.05730	-1.12900	24.06220	22.42840	HepG2	EIF2S1
CCT5	ENSG00000150753.7	7838.56310	15441.47660	-0.97810	23.85840	22.17450	K562	HNRNPC
CCT5	ENSG00000150753.7	5708.33050	8181.89750	-0.51940	22.23820	20.62990	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 166 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CCT5 is not available on ENCORE database.

12 RBPs can affect the splicing of CCT5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CCT5	ENSG00000150753.7	chr5	+	10254785	10254950			10254256	10254317	10256066	10256265	-0.07900	0.00000	0.00000	excluded	K562	SRSF1
SE	CCT5	ENSG00000150753.7	chr5	+	10254877	10254950			10254256	10254317	10256066	10256265	-0.05900	0.00000	0.00000	excluded	K562	SF3B4
SE	CCT5	ENSG00000150753.7	chr5	+	10254785	10254950			10254256	10254317	10256066	10256265	-0.08400	0.00000	0.00000	excluded	HepG2	U2AF1
SE	CCT5	ENSG00000150753.7	chr5	+	10254749	10254950			10254228	10254317	10256066	10256265	-0.06200	0.00000	0.00000	excluded	K562	AQR
SE	CCT5	ENSG00000150753.7	chr5	+	10254785	10254950			10254256	10254317	10256066	10256265	-0.13200	0.00000	0.00000	excluded	K562	U2AF1
SE	CCT5	ENSG00000150753.7	chr5	+	10254855	10254950			10254256	10254317	10256066	10256265	-0.07800	0.00000	0.00000	excluded	K562	U2AF2
SE	CCT5	ENSG00000150753.7	chr5	+	10254785	10254950			10254256	10254317	10256066	10256265	-0.06000	0.00000	0.00000	excluded	K562	TARDBP
SE	CCT5	ENSG00000150753.7	chr5	+	10254877	10254950			10254256	10254317	10256066	10256265	-0.06200	0.00000	0.00000	excluded	K562	SF3B1
MXE	CCT5	ENSG00000150753.7	chr5	+	10260903	10261023	10262592	10262730	10258497	10258647	10263245	10263426	-0.11500	0.00001	0.00123	2included	K562	XRN2
SE	CCT5	ENSG00000150753.7	chr5	+	10254907	10254950			10250354	10250557	10256066	10256265	-0.05300	0.00002	0.00074	excluded	K562	PUS1

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CCT5

General Information

Functions

Localization

Domains (AlphaFold: CCT5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CCT5 is not avaliable on ENCORE database.

34 proteins are bound to CCT5 RNA:

eCLIP assay for CCT5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CCT5 is not available on ENCORE database.

131 RBPs can affect the gene expression of CCT5 :

The Knockdown/knockout RNA-Seq assay for CCT5 is not available on ENCORE database.

12 RBPs can affect the splicing of CCT5 :

The Knockdown/knockout RNA-Seq assay for CCT5 is not avaliable on ENCORE database.