TRIM2

General Information

Gene Name       : TRIM2
Gene ID             : ENSG00000109654.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM2ENSG00000109654.140.000.050.03ENCSR000AEF
HepG2TRIM2ENSG00000109654.141.651.411.53ENCSR985KAT
K562TRIM2ENSG00000109654.140.020.180.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TRIM2Ribo-STAMP-293TshRNABGRSLV05-17,BGRSLV05-18BGRSLV05-1,BGRSLV05-2NotSatisfiedENCORE2
TRIM2Ribo-STAMP-293TshRNATRIM2-BGRSLV07-23,TRIM2-BGRSLV07-24NT-BGRSLV07-1,NT-BGRSLV07-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on TRIM2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TRIM2 is not avaliable on ENCORE database.






NO known proteins are bound to TRIM2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TRIM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM2 is not available on ENCORE database.

  • 90 RBPs can affect the levels of TRIM2.  








The Knockdown/knockout RNA-Seq assay for TRIM2 is not available on ENCORE database.





90 RBPs can affect the gene expression of TRIM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM2ENSG00000109654.10359.97070564.90010-0.650103.981703.36100HepG2AKAP1
TRIM2ENSG00000109654.10332.06100230.797200.524703.472902.62460HepG2AKAP8L
TRIM2ENSG00000109654.10324.33310467.42120-0.527202.996902.18040HepG2ASCC1
TRIM2ENSG00000109654.10676.21400344.851700.9714016.0579014.64840HepG2AUH
TRIM2ENSG00000109654.10473.67990221.162001.0987012.6119011.16240HepG2CALR
TRIM2ENSG00000109654.10170.60850444.07780-1.3801014.3305012.72740HepG2CIRBP
TRIM2ENSG00000109654.101249.77240143.028403.1272056.7242053.65780HepG2CNOT7
TRIM2ENSG00000109654.10845.61820224.287101.9146038.5093036.36600HepG2CPSF6
TRIM2ENSG00000109654.1065.48560121.45990-0.891202.862001.76890HepG2CSTF2
TRIM2ENSG00000109654.10174.76760269.01160-0.622203.550902.84130HepG2CELF1
TRIM2ENSG00000109654.10476.94140289.222600.721508.585007.38900HepG2DAZAP1
TRIM2ENSG00000109654.1087.06180180.87650-1.054905.597104.66760HepG2DDX21
TRIM2ENSG00000109654.10757.95800541.161100.486003.233702.56420HepG2DDX3X
TRIM2ENSG00000109654.10523.76910254.692001.040106.346204.89470HepG2DDX59
TRIM2ENSG00000109654.10378.06730264.130000.517302.914901.87930HepG2DDX5
TRIM2ENSG00000109654.10256.33180464.79900-0.858606.067305.18210HepG2DDX6
TRIM2ENSG00000109654.10276.98950166.511100.734103.573702.30240HepG2AGO1
TRIM2ENSG00000109654.10332.49900480.81830-0.532102.424901.77950HepG2EIF4B
TRIM2ENSG00000109654.10426.39600285.362500.579304.696303.65000HepG2EIF4G1
TRIM2ENSG00000109654.10516.61450273.354200.918209.093407.65450HepG2EIF4G2
TRIM2ENSG00000109654.10170.98480498.22450-1.5429018.5135016.90280HepG2FXR1
TRIM2ENSG00000109654.10600.89800462.229500.378401.876901.32320HepG2G3BP1
TRIM2ENSG00000109654.10170.50080254.26790-0.576602.301301.71410HepG2GPKOW
TRIM2ENSG00000109654.10338.27760202.888500.737403.832103.02670HepG2HNRNPC
TRIM2ENSG00000109654.10165.05820467.92500-1.5033017.2627015.67610HepG2HNRNPK
TRIM2ENSG00000109654.10356.77320263.450300.437402.906202.21810HepG2HNRNPL
TRIM2ENSG00000109654.10167.87970242.65060-0.531502.062401.51020HepG2HNRNPLL
TRIM2ENSG00000109654.10117.36540201.82830-0.782103.682902.59840HepG2HNRNPM
TRIM2ENSG00000109654.10404.45630201.547301.0048012.0033010.81410HepG2HNRNPU
TRIM2ENSG00000109654.10499.17550289.009700.788305.291003.61540HepG2HSPD1
TRIM2ENSG00000109654.10266.57850472.56860-0.826005.302703.87350HepG2KHSRP
TRIM2ENSG00000109654.10849.92690288.768101.557304.696703.06330HepG2KRR1
TRIM2ENSG00000109654.10157.79640501.20390-1.6673018.7337017.21120HepG2MATR3
TRIM2ENSG00000109654.10329.48130513.02340-0.638804.112903.34580HepG2NCBP2
TRIM2ENSG00000109654.10149.12270286.79420-0.943507.208505.98900HepG2NOL12
TRIM2ENSG00000109654.1077.48010130.69160-0.754302.145401.37980HepG2PABPC1
TRIM2ENSG00000109654.10268.76470149.155800.849404.893103.85170HepG2PRPF8
TRIM2ENSG00000109654.10530.74460273.778800.954908.609707.63460HepG2PUF60
TRIM2ENSG00000109654.10574.15030290.419700.9832012.5271011.16110HepG2PUM2
TRIM2ENSG00000109654.10325.78880216.213800.591402.069001.45160HepG2RAVER1
TRIM2ENSG00000109654.10496.06820330.917800.584004.966604.32350HepG2RBM22
TRIM2ENSG00000109654.10224.93170477.45860-1.0859013.1856012.16430HepG2NELFE
TRIM2ENSG00000109654.10279.15530444.70070-0.671805.920905.06580HepG2RECQL
TRIM2ENSG00000109654.10278.88560172.321600.694503.995903.27090HepG2RPS19
TRIM2ENSG00000109654.10322.95130230.649100.485502.186201.47030HepG2RPS2
TRIM2ENSG00000109654.10294.05620143.510701.034806.188804.99820HepG2RPS3A
TRIM2ENSG00000109654.10237.24070147.552300.685003.135302.30580HepG2RRP9
TRIM2ENSG00000109654.10300.27920179.487900.742305.760404.88400HepG2SAFB2
TRIM2ENSG00000109654.10259.42430172.958100.584802.694601.76970HepG2SERBP1
TRIM2ENSG00000109654.10253.54260463.74770-0.871106.290105.24870HepG2SF3A3
TRIM2ENSG00000109654.10344.67100466.21950-0.435802.984102.49780HepG2SRSF1
TRIM2ENSG00000109654.10417.83060237.855300.812708.859607.73300HepG2SRSF7
TRIM2ENSG00000109654.10211.90830379.29980-0.839908.388207.51930HepG2SRSF9
TRIM2ENSG00000109654.10445.08710324.529200.455602.626502.12220HepG2SSB
TRIM2ENSG00000109654.10382.76280236.453600.694804.665303.75680HepG2TARDBP
TRIM2ENSG00000109654.10338.19580195.848300.788005.468604.81380HepG2TIAL1
TRIM2ENSG00000109654.10287.35690197.591000.540203.364202.75590HepG2TRIM56
TRIM2ENSG00000109654.10599.61050422.735900.504204.789003.45090HepG2UTP18
TRIM2ENSG00000109654.10200.41000397.06860-0.9864010.104609.07330HepG2UTP3
TRIM2ENSG00000109654.10120.08720189.41090-0.657402.019501.39160HepG2XRN2
TRIM2ENSG00000109654.10462.78320239.439000.9506012.4236011.17170HepG2ZC3H8
TRIM2ENSG00000109654.109.6581036.87250-1.932703.075401.76540K562APOBEC3C
TRIM2ENSG00000109654.1090.4618016.711102.436404.153903.46330K562AQR
TRIM2ENSG00000109654.1034.2435010.754301.670802.577001.32290K562BCCIP
TRIM2ENSG00000109654.1078.0931023.672701.721905.104903.90810K562BOP1
TRIM2ENSG00000109654.1020.015104.608802.118502.348701.39430K562CCAR1
TRIM2ENSG00000109654.1093.2923019.303902.272807.868806.02620K562CNOT7
TRIM2ENSG00000109654.1095.5914025.167201.925207.867906.53280K562CPSF6
TRIM2ENSG00000109654.1038.493709.535302.013203.577602.53120K562EFTUD2
TRIM2ENSG00000109654.1084.0087017.694602.247109.257007.75220K562EIF4A3
TRIM2ENSG00000109654.1047.2887015.306501.627203.223701.44830K562ESF1
TRIM2ENSG00000109654.1033.418908.996301.893203.125601.91300K562FKBP4
TRIM2ENSG00000109654.1057.6362025.614001.169902.462101.65470K562FMR1
TRIM2ENSG00000109654.1075.0896021.713201.789905.651304.29240K562FTO
TRIM2ENSG00000109654.1030.170908.455401.835102.915901.74610K562GLRX3
TRIM2ENSG00000109654.1061.5134024.025601.356203.171102.32320K562GPKOW
TRIM2ENSG00000109654.1064.1137014.872802.107905.068704.04440K562GRSF1
TRIM2ENSG00000109654.1045.4554012.950501.811303.835901.53060K562HLTF
TRIM2ENSG00000109654.1061.6674016.637101.890005.831804.30030K562HNRNPA1
TRIM2ENSG00000109654.1059.9851010.381702.530506.940906.03570K562HNRNPC
TRIM2ENSG00000109654.1060.6807018.418701.720004.936203.72840K562HNRNPU
TRIM2ENSG00000109654.1078.8118020.522501.941105.699204.30150K562KRR1
TRIM2ENSG00000109654.1071.1726023.452901.601502.402301.58940K562METAP2
TRIM2ENSG00000109654.10162.2933044.541201.8653011.323109.17060K562MSI2
TRIM2ENSG00000109654.1061.389108.889202.787806.246705.07370K562MTPAP
TRIM2ENSG00000109654.1041.696909.879602.077304.243003.34070K562NSUN2
TRIM2ENSG00000109654.1047.208609.279102.346904.606403.63960K562PRPF8
TRIM2ENSG00000109654.1092.3125047.516000.958002.804301.83890K562PUM2
TRIM2ENSG00000109654.1026.0404060.61400-1.218902.386901.46530K562RPS3
TRIM2ENSG00000109654.1032.996909.744301.759602.444301.67480K562SF3A3
TRIM2ENSG00000109654.1055.1487022.859701.270402.490401.56890K562SF3B1
TRIM2ENSG00000109654.1022.793705.074502.167202.705501.45660K562SLBP
TRIM2ENSG00000109654.1041.788009.982902.065504.187303.06010K562SRPK2
TRIM2ENSG00000109654.1064.4038017.209601.903804.510702.41160K562STIP1
TRIM2ENSG00000109654.1094.8103025.115601.916405.071002.93350K562SUPT6H
TRIM2ENSG00000109654.103.4934024.17790-2.791003.757802.80060K562SYNCRIP
TRIM2ENSG00000109654.1060.1253022.996301.386503.620602.80670K562TARDBP
TRIM2ENSG00000109654.1050.940609.504602.422005.585704.09090K562UCHL5
TRIM2ENSG00000109654.1077.3542028.153901.458003.629902.08790K562UTP18
TRIM2ENSG00000109654.1045.123108.963802.331605.551104.29060K562WDR3
TRIM2ENSG00000109654.1073.0018019.829601.880206.460604.48360K562WRN
TRIM2ENSG00000109654.10130.6226018.810802.7957018.7994016.39380K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TRIM2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TRIM2 is not avaliable on ENCORE database.