ZNF385A

General Information

Gene Name : ZNF385A
Gene ID : ENSG00000161642.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF385A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF385A	ENSG00000161642.17	2.88	7.10	4.99	ENCSR000AEF
HepG2	ZNF385A	ENSG00000161642.17	1.29	1.61	1.45	ENCSR985KAT
K562	ZNF385A	ENSG00000161642.17	63.75	44.19	53.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF385A is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF385A RNA is bound by 17 proteins.

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eCLIP assay for ZNF385A is not avaliable on ENCORE database.

17 proteins are bound to ZNF385A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	54780149	54780225	-	intron-Distal	4.81583	19.66459	K562	PTBP1
chr12	54783681	54783773	-	intron-Distal	3.94105	19.18020	K562	PTBP1
chr12	54763455	54763683	-	3'-UTR,intron-Distal,intron-Proximal	4.19013	19.10057	K562	UPF1
chr12	54784933	54785020	-	5'-UTR,CDS,intron-Distal	5.55365	18.59418	K562	AQR
chr12	54778251	54778384	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.44315	16.58923	K562	AQR
chr12	54782272	54782392	-	intron-Distal	5.29130	14.40856	K562	QKI
chr12	54763289	54763376	-	3'-UTR,intron-Distal	5.09011	14.20681	K562	FAM120A
chr12	54780018	54780128	-	intron-Distal	3.84760	13.82076	K562	PTBP1
chr12	54763294	54763387	-	3'-UTR,intron-Distal	3.37550	12.81736	K562	UPF1
chr12	54783773	54783838	-	intron-Distal	4.13580	12.59313	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 32 entries

eCLIP assay for ZNF385A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF385A is not available on ENCORE database.
145 RBPs can affect the levels of ZNF385A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZNF385A is not available on ENCORE database.

145 RBPs can affect the gene expression of ZNF385A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF385A	ENSG00000161642.13	1313.44670	84.34260	3.96090	124.08860	120.02060	HepG2	ASCC1
ZNF385A	ENSG00000161642.13	566.16840	62.81890	3.17190	64.18380	61.92910	HepG2	RPS19
ZNF385A	ENSG00000161642.13	549.11800	79.20450	2.79340	61.27860	59.50820	HepG2	TIAL1
ZNF385A	ENSG00000161642.13	592.69310	103.20920	2.52160	52.94620	50.88090	HepG2	QKI
ZNF385A	ENSG00000161642.13	445.92430	81.51870	2.45150	49.63180	47.33830	HepG2	HNRNPU
ZNF385A	ENSG00000161642.13	414.27670	74.01310	2.48460	48.12610	46.16380	HepG2	CKAP4
ZNF385A	ENSG00000161642.13	605.64950	150.96440	2.00420	42.17960	40.62740	HepG2	RBM22
ZNF385A	ENSG00000161642.13	1015.61860	207.86440	2.28850	40.66030	37.44090	HepG2	CCAR1
ZNF385A	ENSG00000161642.13	392.51830	90.77200	2.11230	36.88370	34.94080	HepG2	UPF1
ZNF385A	ENSG00000161642.13	612.70690	83.92990	2.86780	36.69900	34.83160	HepG2	DDX6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 177 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF385A is not available on ENCORE database.

15 RBPs can affect the splicing of ZNF385A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF385A	ENSG00000161642.13	chr12	-	54778642	54778789			54778211	54778348	54785018	54785065	0.18300	0.00000	0.00001	included	K562	AQR
A3SS	ZNF385A	ENSG00000161642.13	chr12	-	54778211	54778427			54778211	54778348	54785018	54785065	0.14600	0.00000	0.00003	longer	K562	AQR
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.42400	0.00000	0.00000	1included	K562	UCHL5
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.50100	0.00000	0.00000	1included	K562	XRN2
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.32000	0.00000	0.00000	1included	K562	NONO
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.32600	0.00000	0.00024	1included	K562	TARDBP
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	-0.25600	0.00000	0.00001	2included	K562	PUM1
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.33900	0.00000	0.00002	1included	K562	PRPF8
MXE	ZNF385A	ENSG00000161642.13	chr12	-	54769627	54769738	54778211	54778348	54767756	54767919	54785018	54785065	0.47300	0.00000	0.00000	1included	K562	SUPV3L1
SE	ZNF385A	ENSG00000161642.13	chr12	-	54765256	54765499			54764789	54764880	54767756	54767919	-0.15800	0.00001	0.00032	excluded	K562	HNRNPC

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF385A

General Information

Functions

Localization

Domains (AlphaFold: ZNF385A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF385A is not avaliable on ENCORE database.

17 proteins are bound to ZNF385A RNA:

eCLIP assay for ZNF385A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF385A is not available on ENCORE database.

145 RBPs can affect the gene expression of ZNF385A :

The Knockdown/knockout RNA-Seq assay for ZNF385A is not available on ENCORE database.

15 RBPs can affect the splicing of ZNF385A :

The Knockdown/knockout RNA-Seq assay for ZNF385A is not avaliable on ENCORE database.