THOC6

General Information

Gene Name : THOC6
Gene ID : ENSG00000131652.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: THOC6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	THOC6	ENSG00000131652.13	3.05	9.74	6.39	ENCSR000AEF
HepG2	THOC6	ENSG00000131652.13	35.14	22.10	28.62	ENCSR985KAT
K562	THOC6	ENSG00000131652.13	34.91	28.47	31.69	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for THOC6 is not avaliable on ENCORE database.

Proteins bound to RNA

THOC6 RNA is bound by 13 proteins.

CanvasJS.com

eCLIP assay for THOC6 is not avaliable on ENCORE database.

13 proteins are bound to THOC6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	3076246	3076364	+	CDS,intron-Proximal	5.04015	28.82498	HepG2	EFTUD2
chr16	3076185	3076311	+	CDS,intron-Proximal	4.46935	21.48022	K562	EFTUD2
chr16	3076741	3076776	+	CDS	5.39312	20.74880	K562	LIN28B
chr16	3076311	3076385	+	CDS,intron-Proximal	6.56831	15.86009	K562	EFTUD2
chr16	3076259	3076332	+	CDS,intron-Proximal	3.94896	14.65016	HepG2	PRPF8
chr16	3076186	3076246	+	intron-Proximal	6.44884	14.06712	HepG2	EFTUD2
chr16	3076804	3076857	+	intron-Proximal	6.17477	10.90867	K562	EFTUD2
chr16	3074035	3074158	+	5'-UTR,intron-Proximal	4.36726	9.67020	HepG2	CSTF2T
chr16	3076706	3076741	+	CDS	3.78736	9.36842	K562	LIN28B
chr16	3076199	3076251	+	intron-Proximal	5.66213	8.71620	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 30 entries

eCLIP assay for THOC6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for THOC6 is not available on ENCORE database.
77 RBPs can affect the levels of THOC6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for THOC6 is not available on ENCORE database.

77 RBPs can affect the gene expression of THOC6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
THOC6	ENSG00000131652.9	1232.80840	728.56300	0.75870	15.95040	15.00780	HepG2	SRFBP1
THOC6	ENSG00000131652.9	48.14330	188.66290	-1.97040	13.10680	11.31670	K562	G3BP2
THOC6	ENSG00000131652.9	286.09580	634.27410	-1.14860	12.61020	10.84640	K562	PCBP3
THOC6	ENSG00000131652.9	264.28390	518.65020	-0.97270	11.73210	10.70260	HepG2	TAF15
THOC6	ENSG00000131652.9	235.94290	486.51820	-1.04410	11.98230	10.37360	K562	POLR2G
THOC6	ENSG00000131652.9	305.73670	575.02850	-0.91130	10.75080	9.63660	HepG2	QKI
THOC6	ENSG00000131652.9	250.40990	463.53430	-0.88840	8.56170	7.21980	HepG2	FUBP3
THOC6	ENSG00000131652.9	331.44180	530.96820	-0.67990	7.72750	6.90460	HepG2	PTBP1
THOC6	ENSG00000131652.9	313.23890	521.88410	-0.73650	6.68060	5.67260	HepG2	RBM25
THOC6	ENSG00000131652.9	272.22100	528.00110	-0.95580	6.64810	5.61440	HepG2	EIF4B
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 83 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for THOC6 is not available on ENCORE database.

30 RBPs can affect the splicing of THOC6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
RI	THOC6	ENSG00000131652.9	chr16	+	3075924	3076289	3075924	3076167	3076251	3076289	0.20700	0.00001	included	HepG2	SF3A3
RI	THOC6	ENSG00000131652.9	chr16	+	3075924	3076289	3075924	3075989	3076063	3076289	0.57700	0.00000	included	HepG2	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3075708	3076289	3075708	3075824	3075924	3076289	0.39300	0.00000	included	HepG2	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3076063	3076289	3076063	3076167	3076251	3076289	0.42300	0.00000	included	HepG2	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3075924	3076289	3075924	3075989	3076063	3076289	0.26100	0.00005	included	K562	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3075924	3076289	3075924	3076167	3076251	3076289	0.19600	0.00001	included	K562	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3075708	3076289	3075708	3075824	3075924	3076289	0.24400	0.00001	included	K562	PRPF8
RI	THOC6	ENSG00000131652.9	chr16	+	3075708	3076289	3075708	3075824	3075924	3076289	0.13500	0.00023	included	HepG2	IGF2BP3
RI	THOC6	ENSG00000131652.9	chr16	+	3075708	3076289	3075708	3075824	3075924	3076289	0.22200	0.00000	included	HepG2	PCBP1
RI	THOC6	ENSG00000131652.9	chr16	+	3075708	3076289	3075708	3075824	3075924	3076289	0.14800	0.00002	included	HepG2	G3BP1

Showing 1 to 10 of 67 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

THOC6

General Information

Functions

Localization

Domains (AlphaFold: THOC6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for THOC6 is not avaliable on ENCORE database.

13 proteins are bound to THOC6 RNA:

eCLIP assay for THOC6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for THOC6 is not available on ENCORE database.

77 RBPs can affect the gene expression of THOC6 :

The Knockdown/knockout RNA-Seq assay for THOC6 is not available on ENCORE database.

30 RBPs can affect the splicing of THOC6 :

The Knockdown/knockout RNA-Seq assay for THOC6 is not avaliable on ENCORE database.