SENP5

General Information

Gene Name : SENP5
Gene ID : ENSG00000119231.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SENP5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SENP5	ENSG00000119231.10	15.76	11.44	13.60	ENCSR000AEF
HepG2	SENP5	ENSG00000119231.10	7.59	10.54	9.06	ENCSR985KAT
K562	SENP5	ENSG00000119231.10	17.18	17.48	17.33	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SENP5 is not avaliable on ENCORE database.

Proteins bound to RNA

SENP5 RNA is bound by 25 proteins.

CanvasJS.com

eCLIP assay for SENP5 is not avaliable on ENCORE database.

25 proteins are bound to SENP5 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	196594787	196594943	+	5'-UTR	4.51814	19.29649	K562	DDX3X
chr3	196642091	196642305	+	intron-Distal	3.97108	11.19696	HepG2	HLTF
chr3	196644133	196644332	+	intron-Distal	5.46808	10.74012	K562	SAFB2
chr3	196626536	196626645	+	3'-UTR,CDS,intron-Proximal	3.65376	10.26109	HepG2	BCLAF1
chr3	196612155	196612189	+	CDS,intron-Distal	3.72877	10.17756	K562	YBX3
chr3	196657683	196657851	+	3'-UTR,CDS,intron-Proximal	3.31255	9.81234	K562	ZNF622
chr3	196630423	196630475	+	CDS	4.60254	8.41475	HepG2	BCLAF1
chr3	196626794	196626862	+	CDS,intron-Proximal	4.65230	8.41475	HepG2	BCLAF1
chr3	196657768	196657841	+	3'-UTR,CDS,intron-Proximal	3.97099	8.16229	HepG2	GRWD1
chr3	196594780	196594945	+	5'-UTR,intron-Proximal	3.82042	7.93865	HepG2	NCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 66 entries

eCLIP assay for SENP5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SENP5 is not available on ENCORE database.
49 RBPs can affect the levels of SENP5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.

49 RBPs can affect the gene expression of SENP5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SENP5	ENSG00000119231.6	495.24080	862.34660	-0.80010	15.83630	14.48960	HepG2	SMN1
SENP5	ENSG00000119231.6	831.14620	1324.24020	-0.67200	11.74440	10.83080	HepG2	RBM22
SENP5	ENSG00000119231.6	537.11140	830.35260	-0.62850	9.51990	8.44830	HepG2	HNRNPU
SENP5	ENSG00000119231.6	634.35580	954.91370	-0.59010	8.75240	7.48630	HepG2	AKAP8L
SENP5	ENSG00000119231.6	934.82270	1301.62620	-0.47760	8.23470	7.32520	HepG2	PUM1
SENP5	ENSG00000119231.6	1604.00760	1074.68870	0.57770	7.64120	6.56890	HepG2	RBM25
SENP5	ENSG00000119231.6	484.12210	740.60870	-0.61330	7.43430	6.26850	HepG2	PPIL4
SENP5	ENSG00000119231.6	3743.42500	2592.58760	0.52990	6.75440	5.90240	K562	AQR
SENP5	ENSG00000119231.6	1074.76310	708.60640	0.60090	6.30560	5.44350	HepG2	BOP1
SENP5	ENSG00000119231.6	905.36940	1300.64040	-0.52260	6.22800	5.23550	HepG2	PUM2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 51 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.

16 RBPs can affect the splicing of SENP5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SENP5	ENSG00000119231.6	chr3	+	196612021	196613565	196594726	196594944	196626536	196626642	-0.39000	0.00000	0.00000	excluded	HepG2	U2AF2
SE	SENP5	ENSG00000119231.6	chr3	+	196654666	196654750	196630403	196630481	196656503	196656554	-0.66400	0.00000	0.00000	excluded	K562	PUS1
SE	SENP5	ENSG00000119231.6	chr3	+	196654666	196654750	196630403	196630481	196656503	196656554	-0.40900	0.00000	0.00039	excluded	K562	HNRNPU
SE	SENP5	ENSG00000119231.6	chr3	+	196654666	196654750	196630403	196630481	196656503	196656554	-0.46400	0.00000	0.00003	excluded	K562	RBM15
SE	SENP5	ENSG00000119231.6	chr3	+	196654666	196654750	196630403	196630481	196656503	196656554	-0.64800	0.00000	0.00000	excluded	K562	AGGF1
SE	SENP5	ENSG00000119231.6	chr3	+	196650284	196650422	196630403	196630481	196654666	196654750	-0.21000	0.00003	0.00056	excluded	K562	AQR
SE	SENP5	ENSG00000119231.6	chr3	+	196612021	196613565	196594726	196594944	196626536	196626642	-0.28900	0.00004	0.00115	excluded	HepG2	U2AF1
SE	SENP5	ENSG00000119231.6	chr3	+	196612021	196613565	196594726	196594944	196626536	196626642	-0.32500	0.00009	0.00436	excluded	HepG2	SF3A3
SE	SENP5	ENSG00000119231.6	chr3	+	196612021	196613565	196594726	196594944	196626536	196626642	-0.18500	0.00010	0.00656	excluded	K562	SF3B1
SE	SENP5	ENSG00000119231.6	chr3	+	196654666	196654750	196650284	196650422	196656503	196656554	-0.34900	0.00019	0.01413	excluded	K562	EFTUD2

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SENP5

General Information

Functions

Localization

Domains (AlphaFold: SENP5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SENP5 is not avaliable on ENCORE database.

25 proteins are bound to SENP5 RNA:

eCLIP assay for SENP5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.

49 RBPs can affect the gene expression of SENP5 :

The Knockdown/knockout RNA-Seq assay for SENP5 is not available on ENCORE database.

16 RBPs can affect the splicing of SENP5 :

The Knockdown/knockout RNA-Seq assay for SENP5 is not avaliable on ENCORE database.