PPP4R1

General Information

Gene Name : PPP4R1
Gene ID : ENSG00000154845.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PPP4R1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PPP4R1	ENSG00000154845.15	33.84	30.22	32.03	ENCSR000AEF
HepG2	PPP4R1	ENSG00000154845.15	32.45	40.79	36.62	ENCSR985KAT
K562	PPP4R1	ENSG00000154845.15	40.00	56.81	48.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PPP4R1 is not avaliable on ENCORE database.

Proteins bound to RNA

PPP4R1 RNA is bound by 35 proteins.

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eCLIP assay for PPP4R1 is not avaliable on ENCORE database.

35 proteins are bound to PPP4R1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	9563499	9563604	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14279	7.38503	K562	SF3B4
chr18	9550008	9550054	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.93262	4.48002	K562	AQR
chr18	9577063	9577119	-	3'-UTR,CDS,intron-Distal	3.67541	6.06436	HepG2	BCLAF1
chr18	9577148	9577200	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.52848	4.64851	K562	U2AF1
chr18	9588110	9588178	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.22575	6.05769	K562	ZNF622
chr18	9570145	9570276	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.26621	11.20513	K562	ZNF622
chr18	9588100	9588172	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.42259	7.53358	HepG2	BCLAF1
chr18	9594987	9595045	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.02274	3.27405	HepG2	PRPF8
chr18	9577155	9577232	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17349	7.38503	K562	SF3B4
chr18	9570540	9570652	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.42100	6.81726	HepG2	GRWD1
chr18	9563408	9563476	-	3'-UTR,CDS,intron-Distal	3.85709	5.77244	K562	UCHL5
chr18	9547887	9547949	-	3'-UTR,CDS,intron-Distal	3.72061	4.53005	K562	YBX3
chr18	9563504	9563565	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.51315	3.91876	HepG2	U2AF2
chr18	9563425	9563458	-	3'-UTR,CDS,intron-Distal	4.31005	4.04372	HepG2	BCLAF1
chr18	9559575	9559603	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.03378	3.85381	HepG2	BCLAF1
chr18	9588118	9588183	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.76759	4.63912	HepG2	LIN28B
chr18	9588168	9588249	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.28913	5.09550	K562	U2AF2
chr18	9593707	9593798	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.38443	9.11687	K562	PRPF8
chr18	9547349	9547408	-	3'-UTR,intron-Distal	3.77650	4.93978	HepG2	BCLAF1
chr18	9570579	9570672	-	3'-UTR,CDS,intron-Distal	3.09481	6.05977	K562	UCHL5
chr18	9546969	9547051	-	3'-UTR,intron-Distal	6.48624	39.11218	K562	PUM2
chr18	9570315	9570360	-	3'-UTR,CDS,intron-Distal	3.84962	3.15006	K562	RBM15
chr18	9594905	9595054	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.22327	11.76789	K562	GPKOW
chr18	9594962	9595019	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.36059	6.02419	K562	AQR
chr18	9588707	9588749	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.02466	4.22851	HepG2	BCLAF1
chr18	9563373	9563401	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.26714	3.87995	K562	UCHL5
chr18	9549272	9549331	-	3'-UTR,CDS,intron-Distal	3.79104	3.31827	HepG2	GRWD1
chr18	9593760	9593817	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.29107	8.02162	HepG2	BCLAF1
chr18	9595011	9595072	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30428	6.42383	HepG2	GRWD1
chr18	9577125	9577201	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.10749	7.95735	K562	U2AF2
chr18	9584817	9584878	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.58328	4.72639	K562	KHSRP
chr18	9563440	9563552	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.59459	11.97898	K562	ZNF622
chr18	9588113	9588173	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.43579	9.22045	K562	LIN28B
chr18	9593729	9593789	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.61906	4.68690	HepG2	PRPF8
chr18	9547706	9547771	-	3'-UTR,intron-Distal,intron-Proximal	4.49125	5.40333	K562	RBM15
chr18	9588827	9588906	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.55093	17.70754	K562	SF3B4
chr18	9570360	9570415	-	3'-UTR,CDS,intron-Distal	3.24682	4.89070	K562	UCHL5
chr18	9563377	9563440	-	3'-UTR,CDS,intron-Distal	3.47444	4.62864	K562	ZNF622
chr18	9563471	9563587	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.32629	4.94335	K562	GPKOW
chr18	9562032	9562065	-	3'-UTR,CDS,intron-Distal	3.11934	4.26492	HepG2	BCLAF1
chr18	9570179	9570269	-	3'-UTR,CDS,intron-Distal	4.13008	4.45558	HepG2	GRWD1
chr18	9561976	9562032	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.21685	10.68105	HepG2	BCLAF1
chr18	9550173	9550246	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.59864	7.17119	K562	SF3B4
chr18	9547304	9547364	-	3'-UTR,intron-Distal	3.36602	4.94406	K562	YBX3
chr18	9588831	9588902	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.38969	3.05149	K562	SMNDC1
chr18	9614166	9614284	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.94960	12.49465	HepG2	PRPF8
chr18	9614221	9614270	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.79969	9.72545	K562	ZNF622
chr18	9614222	9614269	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.77889	3.70637	K562	DDX3X
chr18	9614255	9614335	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.91940	9.65239	HepG2	EFTUD2
chr18	9614276	9614329	-	5'-UTR,intron-Distal,intron-Proximal	3.90453	3.05889	HepG2	SF3B4
chr18	9614477	9614536	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.94430	9.42102	HepG2	DDX3X
chr18	9614422	9614484	-	5'-UTR,CDS,intron-Distal	3.72557	4.90219	HepG2	AQR
chr18	9614205	9614335	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.16133	8.41080	HepG2	PRPF4
chr18	9584509	9584554	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.43993	3.86355	HepG2	PPIG
chr18	9614483	9614550	-	5'-UTR,intron-Distal,intron-Proximal	5.20289	4.97000	K562	DDX3X
chr18	9614418	9614479	-	CDS,intron-Distal	4.37677	9.97647	HepG2	PRPF8
chr18	9559731	9559799	-	intron-Distal	4.44531	4.76003	K562	KHSRP
chr18	9572460	9572536	-	intron-Distal	5.70200	12.73169	K562	MATR3
chr18	9572073	9572098	-	intron-Distal	3.91477	3.54208	HepG2	SUGP2
chr18	9582050	9582175	-	intron-Distal	4.37848	11.81161	K562	MATR3
chr18	9549593	9549723	-	intron-Distal	5.04213	12.76044	HepG2	HNRNPL
chr18	9551836	9551887	-	intron-Distal	3.74578	4.08493	K562	HNRNPM
chr18	9576967	9576997	-	intron-Distal,intron-Proximal	3.78531	8.43196	K562	KHSRP
chr18	9582529	9582596	-	intron-Distal	5.19100	8.94476	K562	HNRNPM
chr18	9572208	9572276	-	intron-Distal	3.43165	7.80569	HepG2	SUGP2
chr18	9572418	9572460	-	intron-Distal	5.13020	9.35615	K562	MATR3
chr18	9584639	9584700	-	intron-Distal,intron-Proximal	3.49246	4.74253	K562	KHSRP
chr18	9580987	9581079	-	intron-Distal	5.05616	8.94499	HepG2	SUGP2
chr18	9614131	9614186	-	intron-Distal,intron-Proximal	4.31792	5.23978	HepG2	PRPF4
chr18	9588557	9588593	-	intron-Distal	4.32493	4.22101	K562	PRPF8
chr18	9571636	9571735	-	intron-Distal	3.61892	3.33633	HepG2	MATR3
chr18	9608424	9608502	-	intron-Distal	4.01003	4.59145	HepG2	XPO5
chr18	9581063	9581167	-	intron-Distal	4.61821	5.76685	K562	EXOSC5
chr18	9571895	9571953	-	intron-Distal	4.46320	7.22321	K562	PTBP1
chr18	9571574	9571629	-	intron-Distal	5.14996	9.35615	K562	MATR3
chr18	9570917	9570979	-	intron-Distal	3.20992	4.67309	K562	KHSRP
chr18	9571977	9572039	-	intron-Distal	3.21208	3.57598	HepG2	MATR3
chr18	9551838	9551913	-	intron-Distal	4.57769	5.37406	HepG2	HNRNPM
chr18	9576935	9576967	-	intron-Distal,intron-Proximal	4.41682	9.74134	K562	KHSRP
chr18	9582697	9582779	-	intron-Distal	4.51654	4.36036	HepG2	SUGP2
chr18	9559799	9559853	-	intron-Distal	3.25947	3.68839	K562	KHSRP
chr18	9594900	9594963	-	intron-Distal,intron-Proximal	3.56438	3.88924	K562	PRPF8
chr18	9571697	9571735	-	intron-Distal	4.68232	5.26569	K562	MATR3
chr18	9582676	9582729	-	intron-Distal	3.42879	4.02241	K562	EXOSC5
chr18	9614047	9614187	-	intron-Distal,intron-Proximal	3.92825	7.33509	K562	EFTUD2
chr18	9614061	9614145	-	intron-Distal,intron-Proximal	3.83647	4.11837	K562	NCBP2
chr18	9614080	9614131	-	intron-Distal,intron-Proximal	4.72046	7.34038	HepG2	PRPF4
chr18	9576827	9576900	-	intron-Distal	3.41994	4.03817	HepG2	KHSRP
chr18	9581481	9581550	-	intron-Distal	4.15223	3.98115	K562	MATR3
chr18	9584913	9584982	-	intron-Distal,intron-Proximal	3.73867	8.05068	K562	KHSRP
chr18	9593883	9593927	-	intron-Distal,intron-Proximal	4.73016	4.40745	K562	SF3B4
chr18	9614037	9614159	-	intron-Distal,intron-Proximal	3.77211	5.24056	K562	GTF2F1
chr18	9549797	9549873	-	intron-Distal,intron-Proximal	4.62311	7.83098	K562	AGGF1
chr18	9571837	9571962	-	intron-Distal	3.99223	11.24044	HepG2	SUGP2
chr18	9571825	9571912	-	intron-Distal	3.66329	4.09242	HepG2	QKI
chr18	9614117	9614190	-	intron-Distal,intron-Proximal	3.29156	3.27222	HepG2	CSTF2T
chr18	9570786	9570905	-	intron-Distal	3.38475	3.81210	HepG2	KHSRP
chr18	9582062	9582135	-	intron-Distal	3.41234	6.31916	HepG2	SUGP2
chr18	9549798	9549867	-	intron-Distal,intron-Proximal	3.88611	6.68143	K562	HNRNPL
chr18	9595961	9596014	-	intron-Distal	4.14647	3.86809	HepG2	SUGP2
chr18	9582056	9582109	-	intron-Distal	4.61821	5.76685	K562	EXOSC5
chr18	9571656	9571726	-	intron-Distal	4.29676	6.12189	K562	PTBP1
chr18	9549585	9549724	-	intron-Distal	4.28288	16.49785	K562	HNRNPL
chr18	9597659	9597741	-	intron-Distal	3.85695	6.25619	HepG2	SUGP2
chr18	9571642	9571697	-	intron-Distal	3.27419	6.52950	K562	MATR3
chr18	9588622	9588662	-	intron-Distal,intron-Proximal	4.16070	3.49003	K562	PRPF8
chr18	9570787	9570828	-	intron-Distal	3.79449	8.76942	K562	KHSRP
chr18	9613994	9614177	-	intron-Distal,intron-Proximal	4.08686	9.76669	K562	PRPF8
chr18	9571668	9571695	-	intron-Distal	3.36089	3.35050	HepG2	SUGP2
chr18	9614047	9614182	-	intron-Distal,intron-Proximal	3.19929	6.58568	HepG2	FAM120A
chr18	9581044	9581109	-	intron-Distal	4.55094	4.28571	K562	HNRNPM
chr18	9572319	9572383	-	intron-Distal	3.22487	6.28061	K562	PTBP1
chr18	9570827	9570896	-	intron-Distal	4.59811	3.35169	HepG2	U2AF2
chr18	9582258	9582340	-	intron-Distal	3.64678	4.03284	K562	MATR3
chr18	9551887	9551917	-	intron-Distal	4.24065	3.04182	K562	HNRNPM
chr18	9585044	9585076	-	intron-Distal	4.78616	4.07352	K562	KHSRP
chr18	9603068	9603158	-	intron-Distal	4.25610	6.07515	K562	QKI
chr18	9549649	9549692	-	intron-Distal	3.82821	14.94773	K562	AGGF1
chr18	9584586	9584639	-	intron-Distal,intron-Proximal	4.18440	7.26586	K562	KHSRP
chr18	9570728	9570787	-	intron-Distal,intron-Proximal	4.86843	22.94462	K562	KHSRP
chr18	9614108	9614177	-	intron-Distal,intron-Proximal	3.92439	8.19973	HepG2	EFTUD2
chr18	9572335	9572416	-	intron-Distal	4.68858	5.41368	HepG2	PTBP1
chr18	9564588	9564685	-	intron-Distal	4.99154	6.76436	K562	HNRNPL
chr18	9581059	9581109	-	intron-Distal	4.14337	3.60235	HepG2	HNRNPM
chr18	9572310	9572418	-	intron-Distal	5.29070	19.67402	K562	MATR3
chr18	9581079	9581151	-	intron-Distal	3.42741	4.57452	HepG2	SUGP2
chr18	9594914	9594981	-	intron-Distal,intron-Proximal	4.62204	10.83950	K562	EFTUD2
chr18	9571974	9572041	-	intron-Distal	4.65178	11.72322	K562	MATR3
chr18	9571468	9571525	-	intron-Distal	3.81322	6.02877	HepG2	SUGP2
chr18	9561840	9561947	-	intron-Distal,intron-Proximal	4.13036	7.05160	K562	PRPF8
chr18	9571931	9571961	-	intron-Distal	3.59290	4.51915	K562	MATR3
chr18	9576891	9576916	-	intron-Distal	3.56669	5.98045	K562	KHSRP
chr18	9574988	9575076	-	intron-Distal	3.47611	5.12846	K562	HNRNPL
chr18	9584982	9585044	-	intron-Distal	5.82334	12.29181	K562	KHSRP
chr18	9594841	9594882	-	intron-Distal	4.30809	3.64144	K562	EFTUD2
chr18	9579459	9579565	-	intron-Distal	3.43189	3.62826	K562	HNRNPL
chr18	9614010	9614117	-	intron-Distal	3.07489	6.89356	HepG2	CSTF2T
chr18	9582074	9582187	-	intron-Distal	4.02024	6.29761	HepG2	MATR3
chr18	9570979	9571047	-	intron-Distal	3.84426	6.57673	K562	KHSRP
chr18	9594823	9594900	-	intron-Distal	3.36958	5.03897	K562	PRPF8
chr18	9571888	9571931	-	intron-Distal	4.82928	7.02715	K562	MATR3
chr18	9614041	9614143	-	intron-Distal,intron-Proximal	3.63221	5.04221	K562	XRN2
chr18	9582279	9582320	-	intron-Distal	4.00048	3.27829	HepG2	MATR3
chr18	9576916	9576935	-	intron-Distal	3.74974	4.10408	K562	KHSRP
chr18	9610820	9610899	-	intron-Distal	4.73346	7.20766	K562	TARDBP
chr18	9572172	9572278	-	intron-Distal	3.75092	10.55947	K562	MATR3
chr18	9582519	9582596	-	intron-Distal	4.58948	5.01910	HepG2	MATR3
chr18	9570861	9570909	-	intron-Distal	3.11021	4.76345	K562	KHSRP
chr18	9598297	9598337	-	intron-Distal	3.77002	3.16028	HepG2	SUGP2
chr18	9581760	9581891	-	intron-Distal	3.44651	3.89977	K562	MATR3
chr18	9571890	9571978	-	intron-Distal	4.58330	4.74221	HepG2	PTBP1
chr18	9597449	9597511	-	intron-Distal	3.43098	4.81844	HepG2	SUGP2
chr18	9576229	9576303	-	intron-Distal	3.26751	3.06355	HepG2	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for PPP4R1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PPP4R1 is not available on ENCORE database.
57 RBPs can affect the levels of PPP4R1.

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The Knockdown/knockout RNA-Seq assay for PPP4R1 is not available on ENCORE database.

57 RBPs can affect the gene expression of PPP4R1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PPP4R1	ENSG00000154845.11	936.88490	1232.35260	-0.39550	3.03440	1.99310	HepG2	ADAR
PPP4R1	ENSG00000154845.11	1564.51870	1878.49470	-0.26390	2.97100	2.30890	HepG2	CELF1
PPP4R1	ENSG00000154845.11	1455.08070	1200.83860	0.27700	1.93080	1.35150	HepG2	DDX21
PPP4R1	ENSG00000154845.11	944.67700	1676.61800	-0.82770	8.49410	7.46810	HepG2	DDX6
PPP4R1	ENSG00000154845.11	908.95070	1229.94530	-0.43630	7.21160	6.22790	HepG2	DNAJC2
PPP4R1	ENSG00000154845.11	1391.33320	1133.81290	0.29520	2.41410	1.40360	HepG2	EIF3G
PPP4R1	ENSG00000154845.11	2324.79210	1992.71510	0.22230	2.33890	1.55810	HepG2	EIF4G1
PPP4R1	ENSG00000154845.11	3287.46600	2331.32530	0.49570	11.94610	10.83880	HepG2	ETF1
PPP4R1	ENSG00000154845.11	677.07700	857.08740	-0.34010	2.62590	1.48910	HepG2	FAM120A
PPP4R1	ENSG00000154845.11	805.15400	1551.14030	-0.94600	12.33590	11.07300	HepG2	GPKOW
PPP4R1	ENSG00000154845.11	1121.57520	1687.84120	-0.58970	6.50150	5.46150	HepG2	HNRNPK
PPP4R1	ENSG00000154845.11	1266.45010	1840.07860	-0.53900	13.36550	11.98630	HepG2	HNRNPL
PPP4R1	ENSG00000154845.11	1470.09010	1160.03620	0.34160	3.22710	2.20810	HepG2	HNRNPM
PPP4R1	ENSG00000154845.11	910.27130	1414.02730	-0.63540	16.13200	14.52970	HepG2	ILF2
PPP4R1	ENSG00000154845.11	676.89010	1003.83190	-0.56850	2.92380	1.84240	HepG2	METAP2
PPP4R1	ENSG00000154845.11	1323.74060	1648.36090	-0.31640	1.99640	1.37450	HepG2	PABPC4
PPP4R1	ENSG00000154845.11	1329.03280	1617.81420	-0.28370	3.42120	2.76210	HepG2	PCBP1
PPP4R1	ENSG00000154845.11	1758.76870	1312.30310	0.42240	4.88970	3.89180	HepG2	PRPF4
PPP4R1	ENSG00000154845.11	1418.20930	1646.16200	-0.21500	2.11110	1.62100	HepG2	PTBP1
PPP4R1	ENSG00000154845.11	2402.38780	1794.07190	0.42110	4.37130	3.54170	HepG2	RPLP0
PPP4R1	ENSG00000154845.11	878.32550	1232.79390	-0.48910	8.16340	7.14360	HepG2	SAFB2
PPP4R1	ENSG00000154845.11	1380.69140	1713.91100	-0.31190	3.98570	3.29760	HepG2	SF3B4
PPP4R1	ENSG00000154845.11	1480.06120	1833.22020	-0.30870	4.92500	4.03060	HepG2	SLBP
PPP4R1	ENSG00000154845.11	2459.52360	1788.93410	0.45920	9.39360	8.63860	HepG2	SRSF1
PPP4R1	ENSG00000154845.11	2225.63280	1910.89270	0.21990	2.71100	2.20180	HepG2	SSB
PPP4R1	ENSG00000154845.11	2082.93310	1402.59540	0.57040	2.40290	1.40800	HepG2	TBRG4
PPP4R1	ENSG00000154845.11	657.89950	1357.13670	-1.04460	30.57950	28.95050	HepG2	TRIM56
PPP4R1	ENSG00000154845.11	922.36200	1425.85050	-0.62840	4.48700	2.87050	HepG2	XRCC5
PPP4R1	ENSG00000154845.11	2142.79370	1818.00530	0.23700	3.55990	2.96060	HepG2	ZNF622
PPP4R1	ENSG00000154845.11	2013.30760	1278.02070	0.65560	9.80320	7.59930	K562	AARS
PPP4R1	ENSG00000154845.11	2032.41920	1561.21560	0.38040	5.77260	5.00070	K562	AGGF1
PPP4R1	ENSG00000154845.11	2143.13370	1624.48620	0.39960	3.84390	3.07200	K562	AKAP8L
PPP4R1	ENSG00000154845.11	2156.58400	2953.11390	-0.45350	2.79630	2.20540	K562	AQR
PPP4R1	ENSG00000154845.11	1450.40410	1704.50700	-0.23290	2.48710	1.58020	K562	BCLAF1
PPP4R1	ENSG00000154845.11	1397.45610	1721.78410	-0.30110	2.08380	1.33240	K562	BOP1
PPP4R1	ENSG00000154845.11	3371.42670	2657.98850	0.34290	5.94410	5.04090	K562	DDX47
PPP4R1	ENSG00000154845.11	2104.11750	1611.42960	0.38480	2.84300	1.79390	K562	EIF3D
PPP4R1	ENSG00000154845.11	1800.99250	1350.97750	0.41470	5.50400	4.39580	K562	EIF3G
PPP4R1	ENSG00000154845.11	1237.45140	1578.82810	-0.35150	2.55380	1.67790	K562	FTO
PPP4R1	ENSG00000154845.11	2106.68980	1315.52840	0.67920	15.35080	14.03520	K562	FXR1
PPP4R1	ENSG00000154845.11	1494.08720	1791.50780	-0.26190	2.61350	1.50490	K562	GLRX3
PPP4R1	ENSG00000154845.11	1048.91350	1747.93400	-0.73680	11.24290	9.61830	K562	GPKOW
PPP4R1	ENSG00000154845.11	1970.39340	3318.63530	-0.75210	14.46820	12.70850	K562	GRSF1
PPP4R1	ENSG00000154845.11	2272.16670	1724.08890	0.39810	2.64650	1.84120	K562	KIF1C
PPP4R1	ENSG00000154845.11	1376.23230	1883.53180	-0.45270	8.22250	6.89870	K562	MTPAP
PPP4R1	ENSG00000154845.11	1660.26620	2092.80120	-0.33400	6.67680	5.58520	K562	NSUN2
PPP4R1	ENSG00000154845.11	1426.54910	1995.27930	-0.48410	4.33120	3.28960	K562	PCBP3
PPP4R1	ENSG00000154845.11	1167.57400	1530.47100	-0.39050	4.00300	3.03360	K562	POLR2G
PPP4R1	ENSG00000154845.11	2056.67250	2666.57610	-0.37470	3.50980	2.56720	K562	PPIG
PPP4R1	ENSG00000154845.11	954.14730	1254.22220	-0.39450	2.76850	1.86440	K562	PSIP1
PPP4R1	ENSG00000154845.11	2399.74580	1690.21150	0.50560	7.27230	6.23310	K562	PTBP1
PPP4R1	ENSG00000154845.11	3026.93460	1611.25490	0.90960	16.22890	14.95400	K562	PUS1
PPP4R1	ENSG00000154845.11	2120.34820	1569.75090	0.43370	6.01220	5.16460	K562	RBM15
PPP4R1	ENSG00000154845.11	2511.24260	3147.00050	-0.32560	3.43010	1.63710	K562	RBM17
PPP4R1	ENSG00000154845.11	1263.12860	1662.31770	-0.39620	2.81190	1.83020	K562	SF3B1
PPP4R1	ENSG00000154845.11	2110.17800	1656.98170	0.34870	3.62150	2.81990	K562	SRSF1
PPP4R1	ENSG00000154845.11	2553.22360	1535.06950	0.73390	6.69800	5.41100	K562	SYNCRIP
PPP4R1	ENSG00000154845.11	1093.78940	1676.95020	-0.61650	7.16620	5.96910	K562	TARDBP
PPP4R1	ENSG00000154845.11	966.42510	1281.29180	-0.40690	3.42110	2.34770	K562	TRIM56
PPP4R1	ENSG00000154845.11	1096.64320	1500.74710	-0.45260	3.72630	2.52850	K562	UCHL5
PPP4R1	ENSG00000154845.11	1927.69870	2219.03930	-0.20310	2.04110	1.41800	K562	UPF1
PPP4R1	ENSG00000154845.11	2386.56100	3327.19840	-0.47940	3.34100	2.38130	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PPP4R1 is not available on ENCORE database.

25 RBPs can affect the splicing of PPP4R1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	-0.17800	0.00020	0.00560	excluded	K562	SRSF1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.21500	0.00242	0.04240	included	K562	SF3B4
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.28300	0.00002	0.00066	included	HepG2	U2AF1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.25600	0.00000	0.00011	included	K562	AKAP8L
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.28200	0.00010	0.03340	included	HepG2	ILF3
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.18200	0.00020	0.00702	included	HepG2	HNRNPK
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.26100	0.00000	0.00000	included	K562	AQR
SE	PPP4R1	ENSG00000154845.11	chr18	-	9553319	9553420			9550366	9550396	9557218	9557407	-0.05700	0.00096	0.01183	excluded	K562	AQR
SE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073			9559416	9559602	9562919	9563112	-0.09100	0.00004	0.00075	excluded	K562	AQR
SE	PPP4R1	ENSG00000154845.11	chr18	-	9584718	9584826			9584512	9584578	9588086	9588233	-0.08600	0.00010	0.00169	excluded	K562	AQR
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	-0.22000	0.00000	0.00015	excluded	K562	FXR1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.16100	0.00021	0.03949	included	HepG2	TIA1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.19300	0.00024	0.02517	included	K562	SUPV3L1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.26500	0.00000	0.00000	included	K562	PUS1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.33800	0.00001	0.00436	included	K562	GPKOW
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	-0.13500	0.00004	0.01560	excluded	K562	APOBEC3C
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.49400	0.00000	0.00063	included	K562	ILF3
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.21800	0.00001	0.00122	included	HepG2	HNRNPL
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.22500	0.00016	0.05300	included	K562	PPIL4
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	-0.10100	0.00030	0.00939	excluded	HepG2	SRSF1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.20800	0.00016	0.00686	included	HepG2	SF3A3
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.21600	0.00057	0.04474	included	K562	HNRNPUL1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.25200	0.00000	0.00025	included	K562	UTP18
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.23400	0.00000	0.00013	included	K562	RBM15
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.27100	0.00000	0.00001	included	K562	AGGF1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.27900	0.00015	0.02404	included	K562	CPSF6
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.42700	0.00000	0.00000	included	K562	SF3B1
SE	PPP4R1	ENSG00000154845.11	chr18	-	9562919	9563044			9561977	9562073	9563375	9563548	0.24400	0.00000	0.00249	included	K562	NPM1
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9595015	9595132			9595015	9595100	9614223	9614268	0.18200	0.00095	0.06734	longer	HepG2	SF3A3
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9547801	9548046			9547801	9547950	9549194	9549336	0.18900	0.00000	0.00000	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9583114	9583293			9583114	9583273	9584512	9584629	0.07100	0.00083	0.00586	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9595015	9595236			9595015	9595100	9614223	9614268	0.25900	0.00180	0.01175	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9549235	9549411			9549235	9549336	9550049	9550298	0.05200	0.00004	0.00036	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9584718	9584873			9584718	9584826	9588086	9588233	0.08200	0.00000	0.00002	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9557218	9557428			9557218	9557380	9559416	9559602	0.10000	0.00000	0.00000	longer	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073			9561977	9562041	9562919	9563144	-0.05100	0.01863	0.08975	shorter	K562	AQR
A3SS	PPP4R1	ENSG00000154845.11	chr18	-	9595015	9595151			9595015	9595100	9614223	9614268	0.33100	0.00000	0.00002	longer	HepG2	U2AF1
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073	9562919	9563044	9559416	9559602	9563375	9563548	-0.12200	0.00000	0.00008	2included	K562	SRSF1
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9593765	9593872	9595015	9595236	9588708	9588851	9614223	9614268	0.07000	0.00520	0.03715	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9584512	9584629	9584718	9584852	9583114	9583273	9588086	9588233	0.10400	0.00005	0.00059	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9577061	9577189	9583114	9583293	9570154	9570681	9584512	9584578	0.05300	0.00137	0.01196	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9584512	9584578	9584718	9584852	9583114	9583273	9588086	9588233	0.08100	0.00007	0.00090	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073	9562919	9563044	9559416	9559602	9563375	9563548	0.17000	0.00000	0.00000	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9559416	9559602	9562919	9563044	9557218	9557380	9563375	9563548	0.19500	0.00000	0.00000	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562041	9562919	9563112	9559416	9559602	9563375	9563864	0.08900	0.00001	0.00020	1included	K562	AQR
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562041	9562919	9563044	9559416	9559602	9563375	9563548	0.26000	0.00095	0.03616	1included	HepG2	SF3B4
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073	9562919	9563044	9559416	9559602	9563375	9563548	0.11900	0.00002	0.00132	1included	HepG2	SF3B4
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9593765	9593872	9595015	9595100	9588708	9588851	9614223	9614268	0.14500	0.00542	0.09125	1included	K562	SBDS
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9577061	9577189	9583114	9583273	9570154	9570681	9584512	9584578	-0.12300	0.00044	0.07867	2included	K562	PUM2
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9583114	9583273	9584512	9584578	9577061	9577189	9584718	9584826	-0.17700	0.00027	0.02917	2included	K562	CPSF6
MXE	PPP4R1	ENSG00000154845.11	chr18	-	9561977	9562073	9562919	9563044	9559416	9559602	9563375	9563548	0.19100	0.00356	0.05000	1included	K562	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PPP4R1

General Information

Functions

Localization

Domains (AlphaFold: PPP4R1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PPP4R1 is not avaliable on ENCORE database.

35 proteins are bound to PPP4R1 RNA:

eCLIP assay for PPP4R1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PPP4R1 is not available on ENCORE database.

57 RBPs can affect the gene expression of PPP4R1 :

The Knockdown/knockout RNA-Seq assay for PPP4R1 is not available on ENCORE database.

25 RBPs can affect the splicing of PPP4R1 :

The Knockdown/knockout RNA-Seq assay for PPP4R1 is not avaliable on ENCORE database.