POTEF

General Information

Gene Name       : POTEF
Gene ID             : ENSG00000196604.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: POTEF)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POTEFENSG00000196604.120.000.020.01ENCSR000AEF
HepG2POTEFENSG00000196604.123.321.792.55ENCSR985KAT
K562POTEFENSG00000196604.120.190.170.18ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POTEF is not avaliable on ENCORE database.



Proteins bound to RNA
  • POTEF RNA is bound by 9 proteins.  







eCLIP assay for POTEF is not avaliable on ENCORE database.





9 proteins are bound to POTEF RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2130831566130831621-3'-UTR,intron-Distal,intron-Proximal3.529353.88253HepG2HLTF
chr2130833068130833143-3'-UTR,CDS,intron-Distal3.669116.39464HepG2BCLAF1
chr2130833090130833143-3'-UTR,CDS,intron-Distal3.456053.61076HepG2HLTF
chr2130832965130833009-3'-UTR,CDS,intron-Distal4.359824.34038HepG2BCLAF1
chr2130831574130831638-3'-UTR,intron-Distal,intron-Proximal3.220393.45280HepG2BCLAF1
chr2130857178130857210-5'-UTR,CDS,intron-Distal,intron-Proximal3.559254.59506K562DDX24
chr2130886715130886770-5'-UTR,intron-Distal4.123475.48415HepG2EIF3H
chr2130877745130877821-CDS,intron-Distal3.967327.85063HepG2EIF3H
chr2130832504130832566-CDS,intron-Distal3.526883.87469HepG2BCLAF1
chr2130877670130877734-CDS,intron-Distal4.353816.21520HepG2EIF3H
chr2130832529130832572-CDS,intron-Distal4.728753.81516HepG2EIF3H
chr2130832601130832689-CDS,intron-Distal3.319333.57329HepG2EIF3H
chr2130832736130832764-CDS,intron-Distal4.915954.29511HepG2EIF3H
chr2130865581130865640-CDS,intron-Distal,intron-Proximal3.541286.32001K562DDX24
chr2130886171130886277-intron-Distal4.298473.58113K562EWSR1
chr2130878638130878750-intron-Distal5.5219315.67122HepG2DDX6
chr2130878185130878266-intron-Distal,intron-Proximal7.0768726.65735HepG2DROSHA
chr2130878629130878674-intron-Distal10.31001269.10886HepG2RBFOX2
chr2130886178130886291-intron-Distal4.019166.00014K562CSTF2T
chr2130878674130878753-intron-Distal9.76772400.00000HepG2RBFOX2
chr2130878633130878753-intron-Distal6.7625620.30052HepG2DROSHA
chr2130878304130878348-intron-Distal6.7421852.93791HepG2RBFOX2
chr2130878199130878257-intron-Distal,intron-Proximal6.4871275.60894HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for POTEF is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POTEF is not available on ENCORE database.

  • 92 RBPs can affect the levels of POTEF.  








The Knockdown/knockout RNA-Seq assay for POTEF is not available on ENCORE database.





92 RBPs can affect the gene expression of POTEF :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POTEFENSG00000196604.7321.12850169.973200.917705.441604.17230HepG2ABCF1
POTEFENSG00000196604.7360.06980253.608600.505603.442102.69100HepG2AUH
POTEFENSG00000196604.745.17040130.87750-1.534806.439004.98210HepG2BCCIP
POTEFENSG00000196604.7280.62290171.615500.709403.223802.16690HepG2CCAR1
POTEFENSG00000196604.7510.30040164.500701.6332014.3965012.71120HepG2CNOT7
POTEFENSG00000196604.7213.06600121.331200.812303.804503.01090HepG2CPSF6
POTEFENSG00000196604.7146.5848081.052300.854703.855803.00380HepG2DAZAP1
POTEFENSG00000196604.7294.75230177.259100.733503.860503.07220HepG2DDX21
POTEFENSG00000196604.7259.64210173.798300.579002.384401.54150HepG2DDX24
POTEFENSG00000196604.7179.8937097.472100.884003.494801.92420HepG2DDX28
POTEFENSG00000196604.7157.6060067.382401.225805.586904.76100HepG2EIF2S1
POTEFENSG00000196604.7193.5648074.466501.378102.538501.92530HepG2EIF4A3
POTEFENSG00000196604.7181.4642072.501601.323505.103504.18820HepG2EIF4B
POTEFENSG00000196604.7251.60320147.286100.772404.315102.97910HepG2ESF1
POTEFENSG00000196604.7603.90790291.189501.0523016.2778015.01850HepG2ETF1
POTEFENSG00000196604.7459.01930121.542901.917007.513205.84710HepG2FTO
POTEFENSG00000196604.7204.8223091.812501.157507.146005.92020HepG2FUBP3
POTEFENSG00000196604.7193.0226069.696101.469509.082807.91170HepG2G3BP1
POTEFENSG00000196604.7210.1361073.989201.505806.904405.48360HepG2G3BP2
POTEFENSG00000196604.7305.43000137.533301.151007.833406.79210HepG2GPKOW
POTEFENSG00000196604.7249.10040120.376201.049106.624405.68870HepG2HNRNPA1
POTEFENSG00000196604.7415.46140133.889601.6336018.3665016.74910HepG2HNRNPC
POTEFENSG00000196604.7190.1007073.838801.364209.443708.27010HepG2HNRNPL
POTEFENSG00000196604.7273.72250131.251001.060306.798805.86220HepG2HNRNPLL
POTEFENSG00000196604.7212.31070133.004900.674603.714903.02260HepG2HNRNPU
POTEFENSG00000196604.7134.6759070.845200.926603.361602.62410HepG2IGF2BP2
POTEFENSG00000196604.7275.5115066.482802.051009.087307.38380HepG2IGF2BP3
POTEFENSG00000196604.7225.2642071.257101.6604010.411308.38500HepG2KHSRP
POTEFENSG00000196604.7191.8722075.156601.352107.729306.64810HepG2MAGOH
POTEFENSG00000196604.7184.2031075.577801.285204.212603.45070HepG2MATR3
POTEFENSG00000196604.7297.82660138.985601.099408.692407.33390HepG2MSI2
POTEFENSG00000196604.7234.31730133.870000.807502.984401.97380HepG2MTPAP
POTEFENSG00000196604.7267.7981077.358501.791403.127202.45610HepG2NCBP2
POTEFENSG00000196604.776.67460150.28300-0.970902.071001.31960HepG2PABPC1
POTEFENSG00000196604.7114.4020068.894700.731502.180801.53450HepG2PABPC4
POTEFENSG00000196604.7218.20420111.048500.974404.175203.24590HepG2PRPF4
POTEFENSG00000196604.7157.9239070.542901.162602.970502.40740HepG2PTBP1
POTEFENSG00000196604.7270.5224081.428901.7320020.1952018.88980HepG2PUM1
POTEFENSG00000196604.7296.9259081.373701.8674020.0829018.37380HepG2PUM2
POTEFENSG00000196604.7219.8481076.388701.5250011.4436010.30150HepG2QKI
POTEFENSG00000196604.7204.3783069.331801.559608.205007.09380HepG2RBM25
POTEFENSG00000196604.786.45410166.59850-0.946403.037601.92600HepG2RCC2
POTEFENSG00000196604.7180.7324078.503201.202906.841506.05700HepG2NELFE
POTEFENSG00000196604.7199.8068073.122901.4501010.354609.27700HepG2RECQL
POTEFENSG00000196604.7360.17610212.544000.760805.138104.24560HepG2RPLP0
POTEFENSG00000196604.7110.83450193.14380-0.801303.439302.23910HepG2RPS5
POTEFENSG00000196604.7171.88040118.450700.537002.210001.62310HepG2SAFB2
POTEFENSG00000196604.782.42490383.30000-2.2173010.544409.16470HepG2SF3A3
POTEFENSG00000196604.782.34480129.90970-0.657802.005601.39980HepG2SF3B1
POTEFENSG00000196604.7274.2552073.543101.898808.080906.97780HepG2SLBP
POTEFENSG00000196604.7189.4846076.654001.305508.032907.32400HepG2SRSF1
POTEFENSG00000196604.7285.6478075.736201.9151022.8495021.29240HepG2SRSF5
POTEFENSG00000196604.7418.42910193.845501.1100013.2177011.89260HepG2SRSF7
POTEFENSG00000196604.7550.86510238.654001.2067020.2532019.14330HepG2SSB
POTEFENSG00000196604.7444.79590273.016700.704104.572002.96200HepG2SSRP1
POTEFENSG00000196604.767.08560143.42890-1.096302.748101.65110HepG2STIP1
POTEFENSG00000196604.7382.7290086.139902.1515035.2033033.41140HepG2SUCLG1
POTEFENSG00000196604.7253.50790128.097000.984704.768303.91700HepG2SUPV3L1
POTEFENSG00000196604.7229.9187068.910101.7382011.5640010.54130HepG2TAF15
POTEFENSG00000196604.7234.34090127.942400.873004.768903.85160HepG2TARDBP
POTEFENSG00000196604.7184.5938063.307901.5438011.282609.62770HepG2TIA1
POTEFENSG00000196604.7277.86580129.264201.104008.990608.18100HepG2TIAL1
POTEFENSG00000196604.7239.5931074.935601.6768013.8995011.74880HepG2TUFM
POTEFENSG00000196604.774.12260184.42810-1.315103.252702.18170HepG2U2AF2
POTEFENSG00000196604.7242.9472079.310801.615009.425307.84130HepG2UBE2L3
POTEFENSG00000196604.730.0205075.66760-1.333704.081003.15920HepG2UCHL5
POTEFENSG00000196604.730.21600117.28520-1.956607.737006.00450HepG2UPF2
POTEFENSG00000196604.744.36180147.74930-1.735804.605003.17530HepG2XPO5
POTEFENSG00000196604.733.89950126.09760-1.895208.827307.54770HepG2XRN2
POTEFENSG00000196604.7158.46290109.591900.531902.019601.43210HepG2ZC3H8
POTEFENSG00000196604.7243.90210373.85670-0.616205.397304.69740HepG2ZNF622
POTEFENSG00000196604.7322.58530194.271000.731503.915102.34690HepG2ZRANB2
POTEFENSG00000196604.734.94550100.56030-1.524905.631204.86650K562AGGF1
POTEFENSG00000196604.728.69010110.51270-1.945609.265307.17470K562AKAP8
POTEFENSG00000196604.729.01720104.64060-1.850507.829606.67720K562AKAP8L
POTEFENSG00000196604.755.21390106.81490-0.952002.840201.58310K562APOBEC3C
POTEFENSG00000196604.736.94890109.79870-1.571307.039105.48890K562ATP5C1
POTEFENSG00000196604.726.88110120.16550-2.1604011.606009.20610K562CCDC124
POTEFENSG00000196604.719.3357050.24010-1.377602.934801.44490K562CKAP4
POTEFENSG00000196604.743.85770112.58210-1.360105.833204.49820K562DKC1
POTEFENSG00000196604.711.2043044.53490-1.990904.294003.56380K562FXR1
POTEFENSG00000196604.7103.7407040.608001.353005.046304.02650K562G3BP2
POTEFENSG00000196604.737.5123069.79670-0.895802.029601.37650K562GRSF1
POTEFENSG00000196604.743.86540111.03940-1.339905.108403.91940K562KIF1C
POTEFENSG00000196604.732.74940106.30050-1.698606.329004.44110K562MAK16
POTEFENSG00000196604.734.23820124.39360-1.861209.211907.36040K562MBNL1
POTEFENSG00000196604.735.5206087.19180-1.295503.270102.29590K562NAA15
POTEFENSG00000196604.77.9547032.53900-2.032302.893102.12720K562PRPF8
POTEFENSG00000196604.782.19190132.07970-0.684302.314101.56790K562PUF60
POTEFENSG00000196604.773.47370140.51810-0.935502.289101.32620K562PUM1
POTEFENSG00000196604.786.87710137.64860-0.663902.379001.48790K562PUM2
POTEFENSG00000196604.737.15500103.75350-1.481504.785404.09610K562PUS1
POTEFENSG00000196604.730.56040101.10970-1.726206.854405.94860K562RBM15
POTEFENSG00000196604.77.3602033.15630-2.171503.300002.40520K562RPS19
POTEFENSG00000196604.79.0094033.28250-1.885302.685001.37580K562RRP9
POTEFENSG00000196604.710.8288040.02220-1.885903.698602.88640K562SRSF1
POTEFENSG00000196604.717.8644040.51710-1.181402.088901.46800K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POTEF is not available on ENCORE database.






No RBPs affect the alternative splcing events of POTEF on ENCORE database.





The Knockdown/knockout RNA-Seq assay for POTEF is not avaliable on ENCORE database.