PARP4

General Information

Gene Name : PARP4
Gene ID : ENSG00000102699.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PARP4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PARP4	ENSG00000102699.5	35.58	35.78	35.68	ENCSR000AEF
HepG2	PARP4	ENSG00000102699.5	22.06	33.03	27.55	ENCSR985KAT
K562	PARP4	ENSG00000102699.5	13.32	14.39	13.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PARP4 is not avaliable on ENCORE database.

Proteins bound to RNA

PARP4 RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for PARP4 is not avaliable on ENCORE database.

24 proteins are bound to PARP4 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	25052358	25052414	-	CDS,intron-Distal	4.06439	20.44190	HepG2	BCLAF1
chr13	25068750	25068795	-	CDS,intron-Distal	4.51061	19.98514	HepG2	BCLAF1
chr13	25067756	25067821	-	CDS,intron-Distal	3.51486	19.03343	HepG2	BCLAF1
chr13	25068710	25068750	-	CDS,intron-Distal,intron-Proximal	5.02340	18.25084	HepG2	BCLAF1
chr13	25058790	25058826	-	CDS,intron-Distal,intron-Proximal	4.25437	15.57891	HepG2	BCLAF1
chr13	25036427	25036503	-	intron-Distal	4.28616	14.27839	HepG2	SUGP2
chr13	25066593	25066641	-	CDS,intron-Distal	3.86442	13.63776	HepG2	BCLAF1
chr13	25064804	25064840	-	CDS,intron-Distal,intron-Proximal	3.51547	12.01276	HepG2	BCLAF1
chr13	25060336	25060373	-	CDS,intron-Distal	4.39905	11.99763	HepG2	BCLAF1
chr13	25026497	25026567	-	CDS,intron-Distal,intron-Proximal	4.35422	11.50355	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 69 entries

eCLIP assay for PARP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PARP4 is not available on ENCORE database.
78 RBPs can affect the levels of PARP4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PARP4 is not available on ENCORE database.

78 RBPs can affect the gene expression of PARP4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PARP4	ENSG00000102699.5	4466.54410	2977.00500	0.58520	14.92600	13.91770	HepG2	RBM22
PARP4	ENSG00000102699.5	671.44320	1235.06980	-0.87930	14.54260	12.91840	K562	SRSF1
PARP4	ENSG00000102699.5	4161.41180	3085.51360	0.43150	13.86110	12.87090	HepG2	ZNF622
PARP4	ENSG00000102699.5	3305.21720	2334.85960	0.50130	11.06100	10.08660	HepG2	SRSF9
PARP4	ENSG00000102699.5	1958.73870	2708.60180	-0.46760	10.48090	9.43450	HepG2	UTP3
PARP4	ENSG00000102699.5	2436.99480	3217.08470	-0.40070	10.09670	9.03230	HepG2	SUCLG1
PARP4	ENSG00000102699.5	4385.83290	3362.46620	0.38320	9.45750	8.68240	HepG2	SRFBP1
PARP4	ENSG00000102699.5	1945.21810	2502.34430	-0.36330	8.11310	7.10210	HepG2	SMN1
PARP4	ENSG00000102699.5	3314.62620	2567.69200	0.36830	7.91900	6.99810	HepG2	ACO1
PARP4	ENSG00000102699.5	1538.62780	2778.34710	-0.85260	8.45940	6.61770	HepG2	FUS
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PARP4 is not available on ENCORE database.

6 RBPs can affect the splicing of PARP4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PARP4	ENSG00000102699.5	chr13	-	25006718	25006834	25005514	25005614	25008532	25009612	0.07700	0.00000	0.00019	included	HepG2	G3BP1
SE	PARP4	ENSG00000102699.5	chr13	-	25006718	25006834	25005514	25005614	25008532	25009612	0.28200	0.00000	0.00000	included	HepG2	U2AF2
SE	PARP4	ENSG00000102699.5	chr13	-	25006718	25006834	25005514	25005614	25008532	25009612	0.28000	0.00000	0.00000	included	K562	U2AF2
SE	PARP4	ENSG00000102699.5	chr13	-	25006718	25006834	25005514	25005614	25008532	25009612	0.19100	0.00000	0.00006	included	HepG2	FUS
A3SS	PARP4	ENSG00000102699.5	chr13	-	25008532	25009612	25008532	25008719	25015983	25016106	-0.21300	0.00021	0.02268	shorter	K562	SRSF1
SE	PARP4	ENSG00000102699.5	chr13	-	25009440	25009612	25008532	25008719	25015983	25016106	-0.32000	0.00133	0.02648	excluded	K562	SRSF1
SE	PARP4	ENSG00000102699.5	chr13	-	25006718	25006834	25005514	25005614	25008532	25009612	0.12100	0.00272	0.05116	included	K562	U2AF1
RI	PARP4	ENSG00000102699.5	chr13	-	25008532	25009612	25008532	25008719	25009440	25009612	-0.06300	0.00880	0.04806	excluded	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PARP4

General Information

Functions

Localization

Domains (AlphaFold: PARP4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PARP4 is not avaliable on ENCORE database.

24 proteins are bound to PARP4 RNA:

eCLIP assay for PARP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PARP4 is not available on ENCORE database.

78 RBPs can affect the gene expression of PARP4 :

The Knockdown/knockout RNA-Seq assay for PARP4 is not available on ENCORE database.

6 RBPs can affect the splicing of PARP4 :

The Knockdown/knockout RNA-Seq assay for PARP4 is not avaliable on ENCORE database.