NDUFS2

General Information

Gene Name : NDUFS2
Gene ID : ENSG00000158864.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFS2	ENSG00000158864.12	92.65	91.97	92.31	ENCSR000AEF
HepG2	NDUFS2	ENSG00000158864.12	94.58	86.76	90.67	ENCSR985KAT
K562	NDUFS2	ENSG00000158864.12	101.35	94.81	98.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFS2 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFS2 RNA is bound by 25 proteins.

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eCLIP assay for NDUFS2 is not avaliable on ENCORE database.

25 proteins are bound to NDUFS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	161184065	161184140	+	3'-UTR	5.90750	400.00000	K562	TARDBP
chr1	161184017	161184133	+	3'-UTR	7.05431	400.00000	HepG2	SUB1
chr1	161182138	161182229	+	CDS,intron-Proximal	5.63923	38.26076	K562	LIN28B
chr1	161184084	161184137	+	3'-UTR	3.19448	33.72955	K562	PABPC4
chr1	161183717	161183751	+	3'-UTR,CDS,intron-Proximal	5.58987	24.43051	K562	AQR
chr1	161183912	161183971	+	3'-UTR,CDS,intron-Proximal	5.00438	19.17493	K562	SF3B4
chr1	161183710	161183717	+	CDS,intron-Proximal	5.75702	17.48131	K562	AQR
chr1	161172164	161172271	+	5'-UTR,CDS,intron-Proximal	5.10493	16.45884	K562	DDX3X
chr1	161180125	161180179	+	CDS	4.68103	14.65888	HepG2	BCLAF1
chr1	161183650	161183779	+	3'-UTR,CDS,intron-Proximal	3.86309	14.03043	HepG2	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 75 entries

eCLIP assay for NDUFS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFS2 is not available on ENCORE database.
96 RBPs can affect the levels of NDUFS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFS2 is not available on ENCORE database.

96 RBPs can affect the gene expression of NDUFS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFS2	ENSG00000158864.8	961.23320	2324.65280	-1.27410	35.31950	33.26870	K562	HNRNPC
NDUFS2	ENSG00000158864.8	1790.95740	3251.94200	-0.86060	31.29360	29.89310	HepG2	NELFE
NDUFS2	ENSG00000158864.8	966.09380	1724.93630	-0.83630	26.38290	24.69720	HepG2	ZC3H8
NDUFS2	ENSG00000158864.8	1975.74910	3454.91770	-0.80630	22.89400	20.49480	K562	HNRNPU
NDUFS2	ENSG00000158864.8	2051.21720	4081.90250	-0.99280	21.65010	20.18590	K562	AQR
NDUFS2	ENSG00000158864.8	1127.23220	2461.75490	-1.12690	20.17190	18.01270	K562	PCBP3
NDUFS2	ENSG00000158864.8	5245.17090	3513.38900	0.57800	19.06880	17.70150	K562	AGGF1
NDUFS2	ENSG00000158864.8	920.31970	1888.31860	-1.03690	18.39650	16.44310	K562	POLR2G
NDUFS2	ENSG00000158864.8	1873.04150	2871.67360	-0.61650	17.01510	15.71570	HepG2	PCBP1
NDUFS2	ENSG00000158864.8	1696.82880	2611.69570	-0.62210	17.38570	15.60550	K562	MTPAP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 120 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFS2 is not available on ENCORE database.

36 RBPs can affect the splicing of NDUFS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	NDUFS2	ENSG00000158864.8	chr1	+	161182381	161182444	161182140	161182270	161183169	161183265	0.38100	0.00000	included	K562	HNRNPC
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.16400	0.00000	longer	K562	PUS1
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.13100	0.00000	longer	K562	AGGF1
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.11100	0.00000	longer	K562	RBM15
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183822	161183653	161183711	161183945	161184029	0.13400	0.00000	longer	K562	U2AF2
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.09700	0.00001	longer	HepG2	DDX6
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.15800	0.00000	longer	K562	UTP18
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.17900	0.00000	longer	K562	SF3B4
A5SS	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161183843	161183653	161183711	161183945	161184029	0.15100	0.00000	longer	K562	AKAP8L
RI	NDUFS2	ENSG00000158864.8	chr1	+	161183653	161184185	161183653	161183711	161183945	161184185	-0.05200	0.00086	excluded	K562	APOBEC3C

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFS2

General Information

Functions

Localization

Domains (AlphaFold: NDUFS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFS2 is not avaliable on ENCORE database.

25 proteins are bound to NDUFS2 RNA:

eCLIP assay for NDUFS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFS2 is not available on ENCORE database.

96 RBPs can affect the gene expression of NDUFS2 :

The Knockdown/knockout RNA-Seq assay for NDUFS2 is not available on ENCORE database.

36 RBPs can affect the splicing of NDUFS2 :

The Knockdown/knockout RNA-Seq assay for NDUFS2 is not avaliable on ENCORE database.