MRPL48

General Information

Gene Name : MRPL48
Gene ID : ENSG00000175581.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MRPL48)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MRPL48	ENSG00000175581.13	29.76	31.75	30.76	ENCSR000AEF
HepG2	MRPL48	ENSG00000175581.13	37.11	39.50	38.30	ENCSR985KAT
K562	MRPL48	ENSG00000175581.13	54.16	46.05	50.10	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MRPL48 is not avaliable on ENCORE database.

Proteins bound to RNA

MRPL48 RNA is bound by 7 proteins.

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eCLIP assay for MRPL48 is not avaliable on ENCORE database.

7 proteins are bound to MRPL48 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	73498937	73499039	+	5'-UTR,CDS,intron-Proximal	5.02386	13.04528	K562	DDX3X
chr11	73554279	73554353	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.90449	8.54183	K562	U2AF2
chr11	73554278	73554324	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.03061	8.48964	K562	SF3B4
chr11	73575562	73575622	+	3'-UTR	4.54552	7.90397	K562	PABPC4
chr11	73555971	73556021	+	3'-UTR,CDS,intron-Distal	4.69236	7.57924	K562	YBX3
chr11	73570951	73571044	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.15006	7.37965	K562	YBX3
chr11	73499125	73499149	+	intron-Distal,intron-Proximal	4.73811	7.21143	HepG2	EFTUD2
chr11	73499101	73499125	+	intron-Proximal	5.34931	5.16714	HepG2	EFTUD2
chr11	73499115	73499184	+	intron-Distal,intron-Proximal	3.37839	3.88924	K562	PRPF8
chr11	73575553	73575627	+	3'-UTR	3.46756	3.68829	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for MRPL48 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MRPL48 is not available on ENCORE database.
78 RBPs can affect the levels of MRPL48.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.

78 RBPs can affect the gene expression of MRPL48 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MRPL48	ENSG00000175581.9	2208.04910	1069.10390	1.04630	20.72920	18.71150	K562	HSPD1
MRPL48	ENSG00000175581.9	145.50680	386.89420	-1.41090	17.24220	16.10040	HepG2	PTBP1
MRPL48	ENSG00000175581.9	132.32210	466.08710	-1.81650	17.72600	15.59800	HepG2	UBE2L3
MRPL48	ENSG00000175581.9	1833.85180	1271.27050	0.52850	10.35530	9.34800	K562	AGGF1
MRPL48	ENSG00000175581.9	1522.52280	895.33490	0.76590	10.56920	8.67070	K562	PPIG
MRPL48	ENSG00000175581.9	487.79500	830.62450	-0.76790	10.11700	8.62860	K562	POLR2G
MRPL48	ENSG00000175581.9	2014.77680	1287.67600	0.64580	9.57840	8.14670	K562	GRSF1
MRPL48	ENSG00000175581.9	1290.40070	788.61800	0.71030	9.24230	7.59400	K562	FIP1L1
MRPL48	ENSG00000175581.9	138.11910	263.90880	-0.93410	7.62920	6.68990	HepG2	PUS1
MRPL48	ENSG00000175581.9	206.41150	396.74780	-0.94270	6.86920	5.89120	HepG2	NCBP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 82 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.

32 RBPs can affect the splicing of MRPL48 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	MRPL48	ENSG00000175581.9	chr11	+	73536752	73536841	73498974	73499037	73555851	73556021	-0.11500	0.00003	excluded	K562	SF3B4
SE	MRPL48	ENSG00000175581.9	chr11	+	73574216	73574306	73570951	73571054	73575340	73576178	-0.11700	0.00002	excluded	K562	SF3B4
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498916	73499037	73536752	73536813	-0.22600	0.00000	excluded	K562	AKAP8L
SE	MRPL48	ENSG00000175581.9	chr11	+	73536752	73536841	73498974	73499037	73555851	73556021	-0.14800	0.00000	excluded	K562	AQR
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498921	73499037	73536752	73536841	-0.27200	0.00000	excluded	K562	PUS1
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498916	73499037	73536752	73536813	-0.15900	0.00013	excluded	K562	NSUN2
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498921	73499037	73536752	73536841	-0.14800	0.00001	excluded	K562	UTP18
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498916	73499037	73536752	73536841	-0.24000	0.00000	excluded	K562	RBM15
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498916	73499037	73536752	73536841	-0.19100	0.00000	excluded	K562	AGGF1
SE	MRPL48	ENSG00000175581.9	chr11	+	73516071	73516124	73498921	73499037	73536752	73536841	-0.19700	0.00000	excluded	K562	SF3B1

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MRPL48

General Information

Functions

Localization

Domains (AlphaFold: MRPL48)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MRPL48 is not avaliable on ENCORE database.

7 proteins are bound to MRPL48 RNA:

eCLIP assay for MRPL48 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.

78 RBPs can affect the gene expression of MRPL48 :

The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.

32 RBPs can affect the splicing of MRPL48 :

The Knockdown/knockout RNA-Seq assay for MRPL48 is not avaliable on ENCORE database.