LZTS3

General Information

Gene Name       : LZTS3
Gene ID             : ENSG00000088899.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LZTS3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LZTS3ENSG00000088899.150.050.180.11ENCSR000AEF
HepG2LZTS3ENSG00000088899.1511.577.109.34ENCSR985KAT
K562LZTS3ENSG00000088899.151.681.361.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LZTS3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LZTS3 RNA is bound by 15 proteins.  







eCLIP assay for LZTS3 is not avaliable on ENCORE database.





15 proteins are bound to LZTS3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2031440203144077-3'-UTR,intron-Distal3.330224.01314HepG2IGF2BP1
chr2031449753145050-3'-UTR,intron-Distal3.740494.03740HepG2PCBP2
chr2031439913144081-3'-UTR,intron-Distal4.043444.62953HepG2IGF2BP3
chr2031541013154164-5'-UTR,intron-Distal4.144276.83552HepG2DDX3X
chr2031466163146674-CDS,intron-Distal3.539333.76326HepG2RBFOX2
chr2031452813145321-CDS,intron-Distal4.335243.27329HepG2RBM15
chr2031452523145385-CDS,intron-Distal3.619343.22540HepG2G3BP1
chr2031453263145477-CDS,intron-Distal3.9933411.52922HepG2RBFOX2
chr2031462003146256-CDS,intron-Distal3.969123.60441HepG2GRWD1
chr2031456613145721-CDS,intron-Distal3.025484.85880HepG2PPIG
chr2031453143145408-CDS,intron-Distal3.061133.14078HepG2GRSF1
chr2031468663146942-CDS,intron-Distal4.318764.50960HepG2GRWD1
chr2031474323147499-CDS,intron-Distal4.031785.24452HepG2PPIG
chr2031537133153753-intron-Distal3.951899.98158HepG2NKRF
chr2031537533153831-intron-Distal4.6488921.72051HepG2NKRF
chr2031522633152313-intron-Distal3.839668.18836HepG2NKRF
chr2031533953153503-intron-Distal4.051197.30362HepG2HNRNPK
chr2031538383153879-intron-Distal4.334099.46719HepG2NKRF
chr2031458153145899-intron-Distal3.446985.78448HepG2SF3B4
chr2031538813153946-intron-Distal4.4191214.21240HepG2XRN2
chr2031538363153871-intron-Distal5.020895.77834HepG2XRN2
chr2031539463154003-intron-Distal3.326017.90441HepG2XRN2
chr2031538933153995-intron-Distal3.695405.82968HepG2CSTF2T
chr2031538913153956-intron-Distal3.6436812.49846HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LZTS3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LZTS3 is not available on ENCORE database.

  • 96 RBPs can affect the levels of LZTS3.  








The Knockdown/knockout RNA-Seq assay for LZTS3 is not available on ENCORE database.





96 RBPs can affect the gene expression of LZTS3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LZTS3ENSG00000088899.101478.152301267.662700.221502.333901.76760HepG2ACO1
LZTS3ENSG00000088899.101000.936301336.12170-0.416702.662202.14050HepG2AKAP1
LZTS3ENSG00000088899.103479.694402030.408400.777109.811207.98620HepG2AKAP8
LZTS3ENSG00000088899.101954.038201273.758100.6173010.963109.56610HepG2AKAP8L
LZTS3ENSG00000088899.101887.865701105.472400.772009.837308.41670HepG2ASCC1
LZTS3ENSG00000088899.101965.374701354.056200.5374010.958009.74330HepG2AUH
LZTS3ENSG00000088899.10908.10910648.918200.484702.546301.64980HepG2BCCIP
LZTS3ENSG00000088899.101028.54940800.249400.362002.614302.03030HepG2BOP1
LZTS3ENSG00000088899.101257.76210734.660900.775609.843708.62520HepG2CPSF6
LZTS3ENSG00000088899.10564.32980772.10260-0.452303.649402.59000HepG2DDX24
LZTS3ENSG00000088899.101805.093201279.783000.496104.306603.54010HepG2DDX3X
LZTS3ENSG00000088899.102900.702501099.643801.3993026.8101025.18630HepG2DDX6
LZTS3ENSG00000088899.10971.913101212.85310-0.319503.424002.68090HepG2DKC1
LZTS3ENSG00000088899.101536.49300806.484800.929807.796706.66470HepG2DNAJC21
LZTS3ENSG00000088899.101150.93030799.461500.525609.656308.52710HepG2DNAJC2
LZTS3ENSG00000088899.102497.427601056.832701.2406024.3745022.73120HepG2EIF2S1
LZTS3ENSG00000088899.102800.954601137.265601.3002018.5678016.89620HepG2EIF4B
LZTS3ENSG00000088899.101236.358901057.071500.225902.164201.40810HepG2EIF4G1
LZTS3ENSG00000088899.101449.553101012.596300.517405.339604.22840HepG2EIF4G2
LZTS3ENSG00000088899.102530.405401554.713900.7026018.8105017.47680HepG2ETF1
LZTS3ENSG00000088899.101642.126701238.881900.406404.179203.15270HepG2EWSR1
LZTS3ENSG00000088899.102464.615501722.266200.517004.038003.12250HepG2FIP1L1
LZTS3ENSG00000088899.102715.979201093.164501.3129025.4561023.50930HepG2G3BP1
LZTS3ENSG00000088899.10566.13680760.44060-0.425702.729801.83790HepG2GEMIN5
LZTS3ENSG00000088899.101001.99220745.181600.427102.732501.72140HepG2GNB2L1
LZTS3ENSG00000088899.103072.32420832.763601.8833049.8524047.54610HepG2GPKOW
LZTS3ENSG00000088899.101544.273001111.195800.474703.231201.71770HepG2HNRNPAB
LZTS3ENSG00000088899.101674.507201097.091300.610009.501508.27130HepG2HNRNPF
LZTS3ENSG00000088899.101471.85780794.724500.8890012.3393011.13330HepG2HNRNPLL
LZTS3ENSG00000088899.101201.02640899.702900.416605.381604.55820HepG2HNRNPU
LZTS3ENSG00000088899.101541.596801080.325000.512906.806605.71670HepG2IGF2BP1
LZTS3ENSG00000088899.101756.996701111.100700.661007.396506.34900HepG2IGF2BP2
LZTS3ENSG00000088899.101545.84350919.011200.7501022.3264020.48060HepG2ILF2
LZTS3ENSG00000088899.102296.797001696.010100.437402.889002.04030HepG2LARP4
LZTS3ENSG00000088899.10729.895201179.07480-0.691906.004905.04930HepG2MAGOH
LZTS3ENSG00000088899.101121.136201393.39180-0.313602.846402.02670HepG2MSI2
LZTS3ENSG00000088899.101239.98900810.585300.613203.733002.59600HepG2MTPAP
LZTS3ENSG00000088899.101663.195601213.480100.454703.568702.85320HepG2NCBP2
LZTS3ENSG00000088899.101057.20600586.088400.851004.537103.11610HepG2NONO
LZTS3ENSG00000088899.10897.44630704.698400.348702.313501.62740HepG2NSUN2
LZTS3ENSG00000088899.102709.902201229.283001.1403010.729708.95120HepG2PABPC1
LZTS3ENSG00000088899.102243.774101080.432701.0542017.3336015.57320HepG2PABPC4
LZTS3ENSG00000088899.101201.955301010.939600.249602.366301.64460HepG2PRPF4
LZTS3ENSG00000088899.10707.29900492.013300.523503.131902.27790HepG2PRPF8
LZTS3ENSG00000088899.101846.770801014.184700.8646016.0379014.76310HepG2PUF60
LZTS3ENSG00000088899.101776.666801075.823800.7236013.5168012.10290HepG2PUM2
LZTS3ENSG00000088899.101900.833801309.511200.537505.178804.36350HepG2QKI
LZTS3ENSG00000088899.102206.094801775.481000.313203.264002.34070HepG2RBM15
LZTS3ENSG00000088899.102429.882601299.437200.9029026.0193024.75490HepG2RBM22
LZTS3ENSG00000088899.101676.310401188.451700.496105.204204.30640HepG2RBM25
LZTS3ENSG00000088899.101921.780701181.787800.7014010.472309.29110HepG2RPLP0
LZTS3ENSG00000088899.10938.71100801.206000.228401.970601.41180HepG2SAFB2
LZTS3ENSG00000088899.101101.04630834.064100.400502.822001.87350HepG2SERBP1
LZTS3ENSG00000088899.101032.642101559.18420-0.594503.943303.13220HepG2SF3A3
LZTS3ENSG00000088899.101153.75110786.601800.552505.513504.54420HepG2SF3B1
LZTS3ENSG00000088899.101322.63810659.599301.003702.920401.42090HepG2SFPQ
LZTS3ENSG00000088899.101305.83980972.490400.425107.100006.05940HepG2SLBP
LZTS3ENSG00000088899.101495.11170934.309200.6782017.9767016.55420HepG2SMN1
LZTS3ENSG00000088899.101085.45180804.111600.432702.470401.56910HepG2SMNDC1
LZTS3ENSG00000088899.101142.34000607.558300.910802.924301.56960HepG2SNRNP200
LZTS3ENSG00000088899.101906.644401467.638400.377403.674203.12180HepG2SRFBP1
LZTS3ENSG00000088899.10851.591801313.95410-0.6257011.5904010.76580HepG2SRSF1
LZTS3ENSG00000088899.101215.725201001.386100.279703.020902.36970HepG2SRSF5
LZTS3ENSG00000088899.101677.676401077.844800.6382014.0561012.69740HepG2SRSF7
LZTS3ENSG00000088899.101564.637001068.960800.5495011.0780010.10290HepG2SRSF9
LZTS3ENSG00000088899.10671.799401274.20860-0.9235021.4665020.33330HepG2SSB
LZTS3ENSG00000088899.102181.085801175.726400.8914010.013407.79230HepG2STIP1
LZTS3ENSG00000088899.101482.482301138.829200.380405.931105.08370HepG2SUCLG1
LZTS3ENSG00000088899.101649.104301162.529700.504305.652104.33160HepG2SUPT6H
LZTS3ENSG00000088899.101584.06690635.119901.3184019.6220018.10700HepG2SUPV3L1
LZTS3ENSG00000088899.101214.03330774.694800.648007.213906.11850HepG2TARDBP
LZTS3ENSG00000088899.10678.58620425.663800.672704.901103.63100HepG2TFIP11
LZTS3ENSG00000088899.101151.85880882.052400.384905.003204.28980HepG2TRIM56
LZTS3ENSG00000088899.101466.90130990.851600.565905.366704.10570HepG2TUFM
LZTS3ENSG00000088899.101510.29890705.734901.097503.667102.52680HepG2U2AF2
LZTS3ENSG00000088899.101424.266101048.824600.441303.243002.33810HepG2UBE2L3
LZTS3ENSG00000088899.10558.59840375.145800.574303.704702.82760HepG2UCHL5
LZTS3ENSG00000088899.101914.564401382.758900.469409.317508.16790HepG2UPF1
LZTS3ENSG00000088899.10915.68280581.424800.655203.556002.40780HepG2UPF2
LZTS3ENSG00000088899.10926.13790625.207600.566803.864603.01630HepG2XRN2
LZTS3ENSG00000088899.102086.07610997.651601.0641045.4697043.42460HepG2ZC3H8
LZTS3ENSG00000088899.102328.751801520.768800.6147019.8764018.74080HepG2ZNF622
LZTS3ENSG00000088899.10252.06100163.156900.627403.480502.85720K562AGGF1
LZTS3ENSG00000088899.10256.67320179.283800.517602.501101.57510K562AKAP8
LZTS3ENSG00000088899.10236.96760169.771900.481002.024501.46350K562AKAP8L
LZTS3ENSG00000088899.10121.0617072.548200.738602.325901.60030K562CPSF6
LZTS3ENSG00000088899.10314.97190175.122800.846807.077706.10270K562DDX47
LZTS3ENSG00000088899.10245.91750108.669601.178105.545404.08560K562EIF3A
LZTS3ENSG00000088899.1016.6095039.08380-1.234601.995701.40760K562G3BP2
LZTS3ENSG00000088899.10175.80830118.653900.567101.966101.32290K562GRSF1
LZTS3ENSG00000088899.10104.5410058.681600.833002.303301.39220K562IGF2BP2
LZTS3ENSG00000088899.1060.72960111.60820-0.878002.972201.42280K562ILF3
LZTS3ENSG00000088899.10180.4805088.115301.034305.537903.47920K562LARP7
LZTS3ENSG00000088899.10251.13690172.467500.542002.585901.55970K562MAK16
LZTS3ENSG00000088899.10106.3871061.543100.789602.681901.77450K562MATR3
LZTS3ENSG00000088899.10128.5130067.610300.926503.414302.43730K562METAP2
LZTS3ENSG00000088899.10104.4821054.869300.929102.956601.94640K562PCBP2
LZTS3ENSG00000088899.10132.3278081.524400.698702.469001.62080K562PSIP1
LZTS3ENSG00000088899.10251.92730164.048600.618803.322802.68220K562RBM15
LZTS3ENSG00000088899.10137.7159076.247900.852802.641701.84580K562RPS19
LZTS3ENSG00000088899.10104.9692055.473900.920003.126801.99970K562SRSF5
LZTS3ENSG00000088899.10110.9882057.341800.952603.395002.47460K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LZTS3 is not available on ENCORE database.





3 RBPs can affect the splicing of LZTS3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELZTS3ENSG00000088899.10chr20-314844431486073147350314782731541003154192-0.418000.000110.01113excludedHepG2RBM22
A5SSLZTS3ENSG00000088899.10chr20-314614231462743146205314627431432623145798-0.095000.000260.08606shorterHepG2LARP4
RILZTS3ENSG00000088899.10chr20-3146142314700631461423146274314641231470060.200000.002530.02943includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LZTS3 is not avaliable on ENCORE database.