RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chrX | 149107222 | 149107299 | + | intron-Distal | 5.91704 | 48.77934 | HepG2 | FAM120A |
chrX | 149107996 | 149108090 | + | intron-Distal | 6.18472 | 39.82747 | HepG2 | CSTF2T |
chrX | 149107991 | 149108102 | + | intron-Distal | 5.49508 | 36.41184 | K562 | CSTF2T |
chrX | 149108693 | 149108782 | + | intron-Distal,intron-Proximal | 5.37092 | 32.25221 | HepG2 | FAM120A |
chrX | 149108821 | 149108946 | + | intron-Proximal | 5.08500 | 31.89509 | K562 | CSTF2T |
chrX | 149107593 | 149107654 | + | intron-Distal | 5.86286 | 31.61706 | HepG2 | FAM120A |
chrX | 149108488 | 149108551 | + | intron-Distal | 6.70937 | 28.49615 | HepG2 | FAM120A |
chrX | 149107991 | 149108097 | + | intron-Distal | 6.69611 | 26.70278 | K562 | GTF2F1 |
chrX | 149108478 | 149108555 | + | intron-Distal,intron-Proximal | 6.64933 | 26.60236 | K562 | CSTF2T |
chrX | 149107482 | 149107527 | + | intron-Distal | 6.49650 | 24.04669 | HepG2 | FAM120A |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
LINC00894 | ENSG00000235703.1 | 231.67710 | 564.05880 | -1.28370 | 16.84860 | 14.38050 | K562 | MBNL1 | |
LINC00894 | ENSG00000235703.1 | 247.26880 | 67.35710 | 1.87610 | 15.08160 | 13.60590 | HepG2 | EIF4A3 | |
LINC00894 | ENSG00000235703.1 | 44.39940 | 187.85960 | -2.08100 | 15.26130 | 13.60370 | HepG2 | SF3A3 | |
LINC00894 | ENSG00000235703.1 | 220.32640 | 60.93840 | 1.85410 | 13.51110 | 12.26940 | HepG2 | EIF2S1 | |
LINC00894 | ENSG00000235703.1 | 40.30500 | 172.53590 | -2.09790 | 13.41480 | 11.75490 | K562 | PRPF8 | |
LINC00894 | ENSG00000235703.1 | 218.46700 | 63.15210 | 1.79040 | 12.97070 | 11.73950 | HepG2 | HNRNPLL | |
LINC00894 | ENSG00000235703.1 | 164.09580 | 346.93380 | -1.08010 | 11.86990 | 10.62290 | K562 | DDX47 | |
LINC00894 | ENSG00000235703.1 | 291.16280 | 105.56620 | 1.46360 | 11.86150 | 10.51390 | HepG2 | HNRNPC | |
LINC00894 | ENSG00000235703.1 | 546.99390 | 243.44540 | 1.16780 | 11.93060 | 10.38610 | K562 | MTPAP | |
LINC00894 | ENSG00000235703.1 | 262.38330 | 510.56110 | -0.96040 | 12.14560 | 10.03800 | K562 | DKC1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | LINC00894 | ENSG00000235703.1 | chrX | + | 149111868 | 149111980 | 149110007 | 149110065 | 149112235 | 149112318 | -0.70700 | 0.00016 | 0.03943 | excluded | K562 | APOBEC3C | |||
SE | LINC00894 | ENSG00000235703.1 | chrX | + | 149116295 | 149116393 | 149114075 | 149115565 | 149116523 | 149116612 | -0.58300 | 0.00203 | 0.06732 | excluded | K562 | FXR1 | |||
SE | LINC00894 | ENSG00000235703.1 | chrX | + | 149116295 | 149116393 | 149114075 | 149115565 | 149116523 | 149116612 | -0.36000 | 0.00506 | 0.06999 | excluded | K562 | HNRNPC |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".