KDSR

General Information

Gene Name : KDSR
Gene ID : ENSG00000119537.17
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KDSR)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KDSR	ENSG00000119537.17	9.87	10.48	10.18	ENCSR000AEF
HepG2	KDSR	ENSG00000119537.17	9.25	12.13	10.69	ENCSR985KAT
K562	KDSR	ENSG00000119537.17	11.23	10.65	10.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KDSR is not avaliable on ENCORE database.

Proteins bound to RNA

KDSR RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for KDSR is not avaliable on ENCORE database.

9 proteins are bound to KDSR RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	60998002	60998079	-	3'-UTR,intron-Distal,intron-Proximal	7.41258	18.77973	K562	CPEB4
chr18	60998493	60998576	-	3'-UTR,intron-Distal,intron-Proximal	5.15277	14.54239	K562	PTBP1
chr18	60998436	60998482	-	3'-UTR,intron-Distal	5.42635	10.89838	HepG2	PTBP1
chr18	60998438	60998493	-	3'-UTR,intron-Distal	5.89083	10.44241	K562	PTBP1
chr18	61034300	61034354	-	5'-UTR,CDS,intron-Distal	5.02801	9.60748	HepG2	DDX3X
chr18	60998482	60998579	-	3'-UTR,intron-Distal,intron-Proximal	3.84030	9.12237	HepG2	PTBP1
chr18	61018119	61018312	-	CDS,intron-Distal,intron-Proximal	4.39515	8.40228	HepG2	PPIG
chr18	61022722	61022801	-	CDS,intron-Distal,intron-Proximal	5.25660	8.07539	HepG2	BCLAF1
chr18	61010111	61010180	-	intron-Distal	4.83820	7.11777	HepG2	DKC1
chr18	61034354	61034430	-	5'-UTR,intron-Distal,intron-Proximal	3.16301	7.09702	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for KDSR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KDSR is not available on ENCORE database.
66 RBPs can affect the levels of KDSR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KDSR is not available on ENCORE database.

66 RBPs can affect the gene expression of KDSR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KDSR	ENSG00000119537.11	283.18190	597.86530	-1.07810	18.07650	16.62920	HepG2	HNRNPU
KDSR	ENSG00000119537.11	236.58950	541.09460	-1.19350	14.06060	12.78230	HepG2	HNRNPA1
KDSR	ENSG00000119537.11	306.52580	581.03260	-0.92260	11.54020	10.64390	HepG2	TIAL1
KDSR	ENSG00000119537.11	391.59330	795.97640	-1.02340	11.36560	10.12400	HepG2	NCBP2
KDSR	ENSG00000119537.11	1225.93120	813.09750	0.59230	10.57500	9.76620	HepG2	SRFBP1
KDSR	ENSG00000119537.11	430.76520	755.96280	-0.81140	9.69180	8.92820	HepG2	SRSF1
KDSR	ENSG00000119537.11	914.64330	614.98580	0.57260	8.30850	7.44380	HepG2	SRSF9
KDSR	ENSG00000119537.11	485.60040	839.55070	-0.78980	7.61140	6.62090	HepG2	DDX3X
KDSR	ENSG00000119537.11	266.68820	510.67000	-0.93720	8.27710	6.42240	HepG2	RPS5
KDSR	ENSG00000119537.11	403.16500	610.70390	-0.59910	7.55850	6.40960	HepG2	ILF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KDSR is not available on ENCORE database.

5 RBPs can affect the splicing of KDSR :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KDSR	ENSG00000119537.11	chr18	-	61022436	61022630			61022436	61022532	61022730	61022796	0.08900	0.00003	0.00027	longer	K562	AQR
MXE	KDSR	ENSG00000119537.11	chr18	-	61011642	61011726	61018120	61018312	61006032	61006116	61022436	61022532	-0.23700	0.00073	0.01972	2included	K562	HNRNPUL1
MXE	KDSR	ENSG00000119537.11	chr18	-	61011642	61011726	61018120	61018355	61006032	61006116	61022436	61022532	0.06700	0.00263	0.02093	1included	K562	AQR
SE	KDSR	ENSG00000119537.11	chr18	-	61002489	61002591			60994958	60999134	61006032	61006116	-0.17700	0.00289	0.08666	excluded	K562	FXR1
MXE	KDSR	ENSG00000119537.11	chr18	-	61006032	61006116	61011642	61011726	61002489	61002591	61018120	61018312	-0.17900	0.00349	0.02267	2included	HepG2	U2AF2
SE	KDSR	ENSG00000119537.11	chr18	-	61011642	61011726			61006032	61006116	61018120	61018312	-0.06400	0.00387	0.05100	excluded	K562	PUS1
A3SS	KDSR	ENSG00000119537.11	chr18	-	61018120	61018355			61018120	61018312	61022436	61022630	0.06600	0.00509	0.02934	longer	K562	AQR

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KDSR

General Information

Functions

Localization

Domains (AlphaFold: KDSR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KDSR is not avaliable on ENCORE database.

9 proteins are bound to KDSR RNA:

eCLIP assay for KDSR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KDSR is not available on ENCORE database.

66 RBPs can affect the gene expression of KDSR :

The Knockdown/knockout RNA-Seq assay for KDSR is not available on ENCORE database.

5 RBPs can affect the splicing of KDSR :

The Knockdown/knockout RNA-Seq assay for KDSR is not avaliable on ENCORE database.