FAM177A1

General Information

Gene Name : FAM177A1
Gene ID : ENSG00000151327.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM177A1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM177A1	ENSG00000151327.12	17.97	12.79	15.38	ENCSR000AEF
HepG2	FAM177A1	ENSG00000151327.12	72.57	76.94	74.75	ENCSR985KAT
K562	FAM177A1	ENSG00000151327.12	23.58	20.56	22.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM177A1 is not avaliable on ENCORE database.

Proteins bound to RNA

FAM177A1 RNA is bound by 15 proteins.

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eCLIP assay for FAM177A1 is not avaliable on ENCORE database.

15 proteins are bound to FAM177A1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	35519525	35519572	+	intron-Distal	5.40702	21.63333	K562	PUM2
chr14	35519379	35519451	+	intron-Distal	4.23135	14.66762	K562	PUM2
chr14	35522501	35522607	+	3'-UTR,5'-UTR,CDS	4.08355	12.93761	HepG2	BCLAF1
chr14	35550286	35550361	+	CDS	3.70131	12.55157	HepG2	BCLAF1
chr14	35550361	35550446	+	3'-UTR,5'-UTR,CDS	3.97274	12.38345	HepG2	BCLAF1
chr14	35522488	35522662	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.81995	11.85263	K562	UCHL5
chr14	35515494	35515564	+	intron-Distal	6.41751	11.20892	HepG2	DDX3X
chr14	35522607	35522660	+	3'-UTR,5'-UTR,CDS,intron-Proximal	4.85982	9.30195	HepG2	BCLAF1
chr14	35522588	35522663	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.66068	8.74774	HepG2	PPIG
chr14	35515620	35515668	+	5'-UTR,intron-Proximal	4.04975	7.94128	HepG2	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for FAM177A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM177A1 is not available on ENCORE database.
76 RBPs can affect the levels of FAM177A1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM177A1 is not available on ENCORE database.

76 RBPs can affect the gene expression of FAM177A1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM177A1	ENSG00000151327.8	1257.55290	568.91720	1.14420	19.37510	17.96850	K562	PUS1
FAM177A1	ENSG00000151327.8	493.85220	1141.70960	-1.20900	18.01950	16.59640	HepG2	EIF2S1
FAM177A1	ENSG00000151327.8	2234.70560	1482.91320	0.59160	15.62050	14.68470	HepG2	SRFBP1
FAM177A1	ENSG00000151327.8	1956.01830	1256.13250	0.63880	15.57480	14.64790	HepG2	SRSF1
FAM177A1	ENSG00000151327.8	612.00750	1261.67260	-1.04370	13.26700	11.88830	HepG2	EIF4A3
FAM177A1	ENSG00000151327.8	1796.83930	1183.71440	0.60200	11.65540	10.51140	HepG2	CELF1
FAM177A1	ENSG00000151327.8	552.61380	911.05530	-0.72130	11.55480	10.46380	HepG2	UTP3
FAM177A1	ENSG00000151327.8	2411.21220	1382.55810	0.80230	10.74910	9.59280	HepG2	DDX3X
FAM177A1	ENSG00000151327.8	912.01150	554.34230	0.71820	10.33890	9.21710	K562	RBM15
FAM177A1	ENSG00000151327.8	981.66980	573.68610	0.77490	9.98960	8.64800	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 83 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM177A1 is not available on ENCORE database.

11 RBPs can affect the splicing of FAM177A1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FAM177A1	ENSG00000151327.8	chr14	+	35546355	35546422			35522405	35522657	35548132	35548230	0.10900	0.00000	0.00001	included	K562	DROSHA
SE	FAM177A1	ENSG00000151327.8	chr14	+	35546355	35546422			35522405	35522657	35548132	35548230	0.05500	0.00000	0.00479	included	HepG2	DROSHA
MXE	FAM177A1	ENSG00000151327.8	chr14	+	35522483	35522657	35546355	35546422	35515710	35515834	35548132	35548230	-0.18900	0.00001	0.00317	2included	K562	PUM1
SE	FAM177A1	ENSG00000151327.8	chr14	+	35546355	35546422			35522405	35522657	35548132	35548230	0.07900	0.00002	0.00424	included	K562	HNRNPUL1
MXE	FAM177A1	ENSG00000151327.8	chr14	+	35522483	35522657	35546355	35546422	35515710	35515834	35548132	35548230	-0.12500	0.00004	0.01022	2included	K562	LARP4
SE	FAM177A1	ENSG00000151327.8	chr14	+	35546355	35546422			35522483	35522657	35548132	35548230	-0.05800	0.00005	0.00168	excluded	HepG2	U2AF1
MXE	FAM177A1	ENSG00000151327.8	chr14	+	35522483	35522657	35546355	35546422	35515710	35515834	35548132	35548230	0.20500	0.00018	0.01787	1included	HepG2	NOLC1
MXE	FAM177A1	ENSG00000151327.8	chr14	+	35522483	35522657	35546355	35546422	35515710	35515834	35548132	35548230	-0.11900	0.00031	0.01396	2included	K562	PPIL4
SE	FAM177A1	ENSG00000151327.8	chr14	+	35546355	35546422			35522405	35522657	35548132	35548230	-0.05500	0.00096	0.02647	excluded	K562	RBM15
MXE	FAM177A1	ENSG00000151327.8	chr14	+	35522483	35522657	35546355	35546422	35515710	35515834	35548132	35548230	-0.12000	0.00229	0.03847	2included	K562	PUS1

Showing 1 to 10 of 12 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM177A1

General Information

Functions

Localization

Domains (AlphaFold: FAM177A1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM177A1 is not avaliable on ENCORE database.

15 proteins are bound to FAM177A1 RNA:

eCLIP assay for FAM177A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM177A1 is not available on ENCORE database.

76 RBPs can affect the gene expression of FAM177A1 :

The Knockdown/knockout RNA-Seq assay for FAM177A1 is not available on ENCORE database.

11 RBPs can affect the splicing of FAM177A1 :

The Knockdown/knockout RNA-Seq assay for FAM177A1 is not avaliable on ENCORE database.