FAM120B

General Information

Gene Name : FAM120B
Gene ID : ENSG00000112584.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM120B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM120B	ENSG00000112584.13	15.56	13.35	14.46	ENCSR000AEF
HepG2	FAM120B	ENSG00000112584.13	14.21	16.16	15.19	ENCSR985KAT
K562	FAM120B	ENSG00000112584.13	14.40	14.36	14.38	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM120B is not avaliable on ENCORE database.

Proteins bound to RNA

FAM120B RNA is bound by 36 proteins.

CanvasJS.com

eCLIP assay for FAM120B is not avaliable on ENCORE database.

36 proteins are bound to FAM120B RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	170686253	170686297	+	intron-Distal	8.97077	400.00000	HepG2	RBFOX2
chr6	170686784	170686833	+	intron-Distal	8.01515	400.00000	HepG2	RBFOX2
chr6	170686352	170686366	+	intron-Distal	8.81595	304.39794	HepG2	RBFOX2
chr6	170686366	170686388	+	intron-Distal	9.27866	291.33275	HepG2	RBFOX2
chr6	170686225	170686253	+	intron-Distal	8.58972	282.98988	HepG2	RBFOX2
chr6	170686317	170686352	+	intron-Distal	8.10929	265.21333	HepG2	RBFOX2
chr6	170686388	170686417	+	intron-Distal	8.77787	209.72140	HepG2	RBFOX2
chr6	170686297	170686305	+	intron-Distal	8.39583	154.32651	HepG2	RBFOX2
chr6	170686305	170686317	+	intron-Distal	7.63399	147.10989	HepG2	RBFOX2
chr6	170686841	170686873	+	intron-Distal	9.37149	143.71493	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 135 entries

eCLIP assay for FAM120B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM120B is not available on ENCORE database.
59 RBPs can affect the levels of FAM120B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.

59 RBPs can affect the gene expression of FAM120B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM120B	ENSG00000112584.9	609.92070	1178.86280	-0.95070	21.92510	20.50990	HepG2	ETF1
FAM120B	ENSG00000112584.9	562.80550	1161.49920	-1.04530	15.90600	14.64480	K562	PUS1
FAM120B	ENSG00000112584.9	1568.30850	985.31330	0.67050	12.72500	11.77640	HepG2	RBM22
FAM120B	ENSG00000112584.9	491.69190	972.67290	-0.98420	12.64490	10.60990	K562	HNRNPA1
FAM120B	ENSG00000112584.9	1630.61300	841.65510	0.95400	11.44830	10.43800	HepG2	AKAP1
FAM120B	ENSG00000112584.9	1430.53790	866.16890	0.72370	11.94050	10.33460	K562	POLR2G
FAM120B	ENSG00000112584.9	714.34490	1125.58570	-0.65600	8.52130	7.59860	K562	AGGF1
FAM120B	ENSG00000112584.9	479.23480	749.39010	-0.64500	8.58990	7.51570	HepG2	ZC3H8
FAM120B	ENSG00000112584.9	724.04150	1131.73740	-0.64440	8.27080	7.27390	K562	RBM15
FAM120B	ENSG00000112584.9	433.79470	737.68880	-0.76600	8.10090	7.07950	HepG2	HNRNPA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 66 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.

9 RBPs can affect the splicing of FAM120B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FAM120B	ENSG00000112584.9	chr6	+	170699731	170699773			170697374	170697581	170700100	170700209	0.13100	0.00001	0.00047	included	HepG2	U2AF1
A5SS	FAM120B	ENSG00000112584.9	chr6	+	170667313	170667508			170667313	170667406	170697374	170697581	0.29800	0.00017	0.00896	longer	K562	PUS1
A5SS	FAM120B	ENSG00000112584.9	chr6	+	170667313	170667508			170667313	170667406	170697374	170697581	0.25600	0.00026	0.01871	longer	K562	SRSF1
SE	FAM120B	ENSG00000112584.9	chr6	+	170667313	170667406			170657238	170657411	170697374	170697581	-0.29400	0.00037	0.00737	excluded	K562	PUS1
MXE	FAM120B	ENSG00000112584.9	chr6	+	170639536	170639638	170657238	170657411	170632166	170632347	170667313	170667406	-0.30900	0.00048	0.03829	2included	HepG2	IGF2BP3
MXE	FAM120B	ENSG00000112584.9	chr6	+	170639536	170639638	170657238	170657411	170632166	170632347	170667313	170667406	-0.24100	0.00083	0.05336	2included	HepG2	AKAP1
MXE	FAM120B	ENSG00000112584.9	chr6	+	170657238	170657411	170667313	170667406	170639536	170639638	170697374	170697581	0.28400	0.00123	0.02393	1included	K562	PUS1
SE	FAM120B	ENSG00000112584.9	chr6	+	170639536	170639638			170632166	170632347	170657238	170657411	-0.19500	0.00128	0.05613	excluded	HepG2	SF3B4
MXE	FAM120B	ENSG00000112584.9	chr6	+	170639536	170639638	170657238	170657411	170632166	170632347	170667313	170667406	-0.25700	0.00147	0.04974	2included	HepG2	NCBP2
MXE	FAM120B	ENSG00000112584.9	chr6	+	170697374	170697581	170700100	170700209	170657238	170657411	170704574	170704667	0.11500	0.00160	0.05100	1included	HepG2	SF3A3

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM120B

General Information

Functions

Localization

Domains (AlphaFold: FAM120B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM120B is not avaliable on ENCORE database.

36 proteins are bound to FAM120B RNA:

eCLIP assay for FAM120B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.

59 RBPs can affect the gene expression of FAM120B :

The Knockdown/knockout RNA-Seq assay for FAM120B is not available on ENCORE database.

9 RBPs can affect the splicing of FAM120B :

The Knockdown/knockout RNA-Seq assay for FAM120B is not avaliable on ENCORE database.