EPB41L5

General Information

Gene Name : EPB41L5
Gene ID : ENSG00000115109.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EPB41L5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EPB41L5	ENSG00000115109.13	5.77	4.92	5.34	ENCSR000AEF
HepG2	EPB41L5	ENSG00000115109.13	22.86	31.82	27.34	ENCSR985KAT
K562	EPB41L5	ENSG00000115109.13	5.51	5.52	5.51	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EPB41L5 is not avaliable on ENCORE database.

Proteins bound to RNA

EPB41L5 RNA is bound by 24 proteins.

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eCLIP assay for EPB41L5 is not avaliable on ENCORE database.

24 proteins are bound to EPB41L5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	120867873	120867990	+	intron-Distal	6.46684	400.00000	HepG2	QKI
chr2	120844758	120844818	+	CDS,intron-Proximal	4.80968	26.05947	HepG2	BCLAF1
chr2	120867828	120867873	+	intron-Distal	4.63525	23.65744	HepG2	QKI
chr2	120869219	120869345	+	intron-Distal	3.25168	19.53898	HepG2	SUGP2
chr2	120867339	120867469	+	intron-Distal	3.98226	19.17057	HepG2	SUGP2
chr2	120833276	120833318	+	CDS,intron-Proximal	4.24644	17.10002	HepG2	BCLAF1
chr2	120868954	120869043	+	intron-Distal	3.40631	16.32618	HepG2	SUGP2
chr2	120934902	120935041	+	3'-UTR	4.20415	14.24634	HepG2	GRSF1
chr2	120869214	120869328	+	intron-Distal	4.76700	13.58090	HepG2	MATR3
chr2	120860941	120861017	+	intron-Distal	4.73367	12.88973	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 115 entries

eCLIP assay for EPB41L5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EPB41L5 is not available on ENCORE database.
63 RBPs can affect the levels of EPB41L5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EPB41L5 is not available on ENCORE database.

63 RBPs can affect the gene expression of EPB41L5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EPB41L5	ENSG00000115109.9	1600.05970	2410.42340	-0.59120	19.16140	17.88530	HepG2	PUM1
EPB41L5	ENSG00000115109.9	1019.25580	1582.64640	-0.63480	16.25900	14.80660	HepG2	DNAJC2
EPB41L5	ENSG00000115109.9	955.95180	1588.70640	-0.73280	15.16970	13.52190	HepG2	PPIL4
EPB41L5	ENSG00000115109.9	1163.38240	1781.22240	-0.61450	14.06070	12.78300	HepG2	HNRNPU
EPB41L5	ENSG00000115109.9	3900.94820	2752.45280	0.50300	13.18250	12.03110	HepG2	ETF1
EPB41L5	ENSG00000115109.9	3182.78610	2256.05790	0.49640	12.81550	11.87120	HepG2	SSB
EPB41L5	ENSG00000115109.9	1211.17840	1760.62000	-0.53970	12.74600	11.52930	HepG2	CKAP4
EPB41L5	ENSG00000115109.9	2925.77990	1994.90250	0.55240	11.49550	10.47590	HepG2	TAF15
EPB41L5	ENSG00000115109.9	3313.12360	2397.36610	0.46660	10.37490	9.18510	HepG2	AUH
EPB41L5	ENSG00000115109.9	3000.75390	2219.30960	0.43510	9.87880	9.10860	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 70 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EPB41L5 is not available on ENCORE database.

11 RBPs can affect the splicing of EPB41L5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.44200	0.00000	0.00000	excluded	HepG2	G3BP1
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.44100	0.00000	0.00000	excluded	HepG2	RBM22
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.64100	0.00000	0.00000	excluded	HepG2	AKAP1
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.34400	0.00000	0.00134	excluded	HepG2	EFTUD2
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861863			120858285	120858390	120885263	120885427	-0.42600	0.00000	0.00000	excluded	HepG2	PTBP1
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.32900	0.00009	0.01111	excluded	HepG2	IGF2BP3
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.19700	0.00021	0.02780	excluded	HepG2	DDX59
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.27000	0.00031	0.01031	excluded	HepG2	HNRNPK
MXE	EPB41L5	ENSG00000115109.9	chr2	+	120776652	120776840	120799581	120799686	120770694	120770786	120830753	120830796	0.17500	0.00058	0.04014	1included	HepG2	IGF2BP3
SE	EPB41L5	ENSG00000115109.9	chr2	+	120861635	120861852			120858274	120858390	120885263	120885427	-0.25000	0.00084	0.06595	excluded	HepG2	DDX6

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EPB41L5

General Information

Functions

Localization

Domains (AlphaFold: EPB41L5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EPB41L5 is not avaliable on ENCORE database.

24 proteins are bound to EPB41L5 RNA:

eCLIP assay for EPB41L5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EPB41L5 is not available on ENCORE database.

63 RBPs can affect the gene expression of EPB41L5 :

The Knockdown/knockout RNA-Seq assay for EPB41L5 is not available on ENCORE database.

11 RBPs can affect the splicing of EPB41L5 :

The Knockdown/knockout RNA-Seq assay for EPB41L5 is not avaliable on ENCORE database.