RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr19 | 6368833 | 6368857 | + | 3'-UTR | 6.63246 | 29.96773 | K562 | PABPC4 |
chr19 | 6362200 | 6362336 | + | intron-Distal | 6.79675 | 29.40935 | HepG2 | PCBP2 |
chr19 | 6362472 | 6362538 | + | CDS,intron-Proximal | 6.02429 | 20.03354 | K562 | YBX3 |
chr19 | 6368857 | 6368892 | + | 3'-UTR | 5.77841 | 17.53659 | K562 | PABPC4 |
chr19 | 6364511 | 6364583 | + | CDS,intron-Distal | 4.16837 | 14.92488 | K562 | YBX3 |
chr19 | 6362044 | 6362134 | + | intron-Distal,intron-Proximal | 5.68763 | 11.50340 | HepG2 | PCBP2 |
chr19 | 6361658 | 6361721 | + | CDS | 4.01321 | 11.04556 | K562 | YBX3 |
chr19 | 6361877 | 6361939 | + | 5'-UTR,CDS,intron-Proximal | 5.50866 | 9.01147 | K562 | METAP2 |
chr19 | 6361858 | 6361907 | + | 5'-UTR,CDS,intron-Proximal | 6.01960 | 7.49422 | HepG2 | DDX3X |
chr19 | 6364608 | 6364641 | + | CDS,intron-Distal | 3.91955 | 7.46470 | K562 | YBX3 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
CLPP | ENSG00000125656.4 | 155.55720 | 415.64650 | -1.41790 | 18.33470 | 17.07400 | HepG2 | TAF15 | |
CLPP | ENSG00000125656.4 | 437.78190 | 184.23710 | 1.24850 | 18.26550 | 16.98420 | HepG2 | TRIM56 | |
CLPP | ENSG00000125656.4 | 322.86830 | 166.96590 | 0.95130 | 9.84670 | 8.70570 | HepG2 | DNAJC2 | |
CLPP | ENSG00000125656.4 | 541.46220 | 294.68890 | 0.87760 | 8.91860 | 7.33290 | K562 | TIA1 | |
CLPP | ENSG00000125656.4 | 534.78980 | 329.57980 | 0.69820 | 8.18110 | 7.07770 | HepG2 | HNRNPL | |
CLPP | ENSG00000125656.4 | 1432.37140 | 1028.11440 | 0.47830 | 7.81580 | 6.93080 | K562 | AGGF1 | |
CLPP | ENSG00000125656.4 | 845.13070 | 1229.17830 | -0.54040 | 8.19890 | 6.85340 | K562 | SF3A3 | |
CLPP | ENSG00000125656.4 | 512.69690 | 269.94760 | 0.92530 | 8.66900 | 6.66720 | K562 | SRSF4 | |
CLPP | ENSG00000125656.4 | 806.19610 | 468.42410 | 0.78320 | 8.83990 | 6.65480 | K562 | CCAR1 | |
CLPP | ENSG00000125656.4 | 223.45480 | 376.18820 | -0.75150 | 6.99840 | 6.19270 | HepG2 | SRSF9 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | -0.06100 | 0.00000 | 0.00045 | excluded | K562 | AARS | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.08900 | 0.00000 | 0.00005 | included | HepG2 | RBM22 | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.14900 | 0.00000 | 0.00000 | included | K562 | AQR | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.08700 | 0.00010 | 0.00200 | included | HepG2 | SF3A3 | |||
SE | CLPP | ENSG00000125656.4 | chr19 | + | 6364462 | 6364642 | 6362456 | 6362553 | 6366268 | 6366374 | 0.10600 | 0.00013 | 0.03708 | included | K562 | SBDS | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.08800 | 0.00108 | 0.07103 | included | HepG2 | EFTUD2 | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.06900 | 0.00111 | 0.01729 | included | HepG2 | PCBP1 | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.07400 | 0.00467 | 0.04390 | included | K562 | EFTUD2 | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.05600 | 0.00487 | 0.06694 | included | HepG2 | FUBP3 | |||
RI | CLPP | ENSG00000125656.4 | chr19 | + | 6361879 | 6362553 | 6361879 | 6361951 | 6362456 | 6362553 | 0.06100 | 0.00689 | 0.05947 | included | HepG2 | U2AF1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".